Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_10g0530600 | OGI:10063120 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr10:20629087-20629985 | ||||||||
| Gene Symbol | GSTU48, OsGSTU48 | ||||||||||
| DNA seq | ACTATTCAGGGCATCCATCGATCAGAGAAGAGAGACGAGCGATCGATGGCTGAGGAGCTGAAGCTGCTGGGGTCGTTGTCCGGCGTGAGCCCGTACGTGATCCGCGCGCAGATGGCGCTCGCCGTCAAGGGCTTGGCGCACGACTACCTCCCCGAGGACCTCACCCGCAAGAGCAAGCTCCTCCTCGACAGCAACCCGGTGCACAAGTCGGTGCCCGTGCTCATCCACAACGGCAAGCCGGTGTGCGACTCGCTGGTCATCGTCGAGTACGTCGACGAGGCGTTCCCCGGCGGCGCCGCCGCGCTGCTCCCCGCCGACCCCTACCACCGCGCCGTCGCTCGCTTCTGGGCCGCCTTCATCGACAGCAAGGTGTTCCCTCCGTGCCTTGCCATTCTGAAGACGGCGGCGGCGGAGGCGGAGGAGGAGAAGGCGGCGAAGGTGAAGGAGACGGTCGAGGCGCTCCAGCTCGTGGAAGGGGCCTTCGGTGAGTGCTCCAAGAGGAAGCCGTTCTTCGGCGGCGACGCCGTCGGGTACCTCGACGTCGTGCTCGGGTGCTACCTGTGCTGGTTCGAGGGGGTAAGCGAGATCGCTGGCGGTGTGTCGCCGCCGCTCCTCGACGCGTCGAGGACGCCGCAGCTGGCCGCGTGGGCGGCGCGCTTCAGATCAGCGGCCGATGCAGTCGGATGCTCGGTTCCTCGGGTGGACAAGGTTGAGGCTTACCTCAACAACGTGCTCAAGCCGAAGTGGAGTGCCGCCGCCGCGGCGTCCAGCCATTAAAATTCCAATCCGTATTTGTATTTTGAAAAGTTTTTGAGCGTACCGTCAAGTACGTTATTGACGGCAGGAAAATGCCAAGAGTTGGACGTACTACTGCTATGAATTATTATTTCAGTGGATTA
More
|
||||||||||
| CDS seq | ATGGCTGAGGAGCTGAAGCTGCTGGGGTCGTTGTCCGGCGTGAGCCCGTACGTGATCCGCGCGCAGATGGCGCTCGCCGTCAAGGGCTTGGCGCACGACTACCTCCCCGAGGACCTCACCCGCAAGAGCAAGCTCCTCCTCGACAGCAACCCGGTGCACAAGTCGGTGCCCGTGCTCATCCACAACGGCAAGCCGGTGTGCGACTCGCTGGTCATCGTCGAGTACGTCGACGAGGCGTTCCCCGGCGGCGCCGCCGCGCTGCTCCCCGCCGACCCCTACCACCGCGCCGTCGCTCGCTTCTGGGCCGCCTTCATCGACAGCAAGGTGTTCCCTCCGTGCCTTGCCATTCTGAAGACGGCGGCGGCGGAGGCGGAGGAGGAGAAGGCGGCGAAGGTGAAGGAGACGGTCGAGGCGCTCCAGCTCGTGGAAGGGGCCTTCGGTGAGTGCTCCAAGAGGAAGCCGTTCTTCGGCGGCGACGCCGTCGGGTACCTCGACGTCGTGCTCGGGTGCTACCTGTGCTGGTTCGAGGGGGTAAGCGAGATCGCTGGCGGTGTGTCGCCGCCGCTCCTCGACGCGTCGAGGACGCCGCAGCTGGCCGCGTGGGCGGCGCGCTTCAGATCAGCGGCCGATGCAGTCGGATGCTCGGTTCCTCGGGTGGACAAGGTTGAGGCTTACCTCAACAACGTGCTCAAGCCGAAGTGGAGTGCCGCCGCCGCGGCGTCCAGCCATTAA
More
|
||||||||||
| Protein seq | MAEELKLLGSLSGVSPYVIRAQMALAVKGLAHDYLPEDLTRKSKLLLDSNPVHKSVPVLIHNGKPVCDSLVIVEYVDEAFPGGAAALLPADPYHRAVARFWAAFIDSKVFPPCLAILKTAAAEAEEEKAAKVKETVEALQLVEGAFGECSKRKPFFGGDAVGYLDVVLGCYLCWFEGVSEIAGGVSPPLLDASRTPQLAAWAARFRSAADAVGCSVPRVDKVEAYLNNVLKPKWSAAAAASSH |
||||||||||
| Function | Probable glutathione S-transferase GSTU6 [UniProtKB/Swiss-Prot:Q06398] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_10g0530600 | OsNip_10t0530600-01 | Chr10 | 20629087 | 20629985 | + | RAP2018-11-26 | ||
| CDS seq | ATGGCTGAGGAGCTGAAGCTGCTGGGGTCGTTGTCCGGCGTGAGCCCGTACGTGATCCGCGCGCAGATGGCGCTCGCCGTCAAGGGCTTGGCGCACGACTACCTCCCCGAGGACCTCACCCGCAAGAGCAAGCTCCTCCTCGACAGCAACCCGGTGCACAAGTCGGTGCCCGTGCTCATCCACAACGGCAAGCCGGTGTGCGACTCGCTGGTCATCGTCGAGTACGTCGACGAGGCGTTCCCCGGCGGCGCCGCCGCGCTGCTCCCCGCCGACCCCTACCACCGCGCCGTCGCTCGCTTCTGGGCCGCCTTCATCGACAGCAAGGTGTTCCCTCCGTGCCTTGCCATTCTGAAGACGGCGGCGGCGGAGGCGGAGGAGGAGAAGGCGGCGAAGGTGAAGGAGACGGTCGAGGCGCTCCAGCTCGTGGAAGGGGCCTTCGGTGAGTGCTCCAAGAGGAAGCCGTTCTTCGGCGGCGACGCCGTCGGGTACCTCGACGTCGTGCTCGGGTGCTACCTGTGCTGGTTCGAGGGGGTAAGCGAGATCGCTGGCGGTGTGTCGCCGCCGCTCCTCGACGCGTCGAGGACGCCGCAGCTGGCCGCGTGGGCGGCGCGCTTCAGATCAGCGGCCGATGCAGTCGGATGCTCGGTTCCTCGGGTGGACAAGGTTGAGGCTTACCTCAACAACGTGCTCAAGCCGAAGTGGAGTGCCGCCGCCGCGGCGTCCAGCCATTAA
More
|
|||||||
| Protein seq | MAEELKLLGSLSGVSPYVIRAQMALAVKGLAHDYLPEDLTRKSKLLLDSNPVHKSVPVLIHNGKPVCDSLVIVEYVDEAFPGGAAALLPADPYHRAVARFWAAFIDSKVFPPCLAILKTAAAEAEEEKAAKVKETVEALQLVEGAFGECSKRKPFFGGDAVGYLDVVLGCYLCWFEGVSEIAGGVSPPLLDASRTPQLAAWAARFRSAADAVGCSVPRVDKVEAYLNNVLKPKWSAAAAASSH
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.000000 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0530900 | SBH | 3.695326 | 5.594304 | 4.876844 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g38720 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0530600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0017880 | SBH | 0.0 | 3.343572 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0018370 | SBH | 0.150370 | 26.990034 | 10.246747 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0017660 | SBH | 0.516216 | 8.552260 | 0.252772 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0018260 | SBH | 0.248896 | 0.589044 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0017920 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0340000 | RBH | 0.0330495 | 0.321726 | 5.9055225 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0017820 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0364300 | RBH | 0.0775495 | 0 | 0.178025 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0017590 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0017550 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0018070 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0017640 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0018140 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G017890 | SBH | 1.660139 | 16.673845 | 4.585860 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0018070 | SBH | 0.456091 | 29.875797 | 7.862017 |
