Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_10g0018030 | OGI:10062680 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr10:22470892-22482017 | ||||||||
| Gene Symbol | GSTU22, OsGSTU22, GSTU19, OsGSTU19, GSTU6, OsGSTU6.1, GSTU6.1, GSTU3, OsGSTU3, OsGSTU29, GSTU29, Osgstu4, GST, GSTU2, OsGSTU2, ParC, GSTU25, OsGSTU25, GSTU27, OsGSTU27, GSTU26, OsGSTU26 | ||||||||||
| DNA seq | accaagaggaacccattaacgcaagacacacacatcgacacatcgtgtccatcggagcacaggagagatggccggacacgacgagctgaagctgctcggccactggtcgagcgcctacgtcaccagagtgaaactcgcgctccacctcaagggcgtgagctacgagtacgtcgaggaggatctccgcaacaagagcgacctcttgctcgcctccaacccggtgcacaagacggtgcccgtgctcatccacaacgggaaccccatccgcgagtcgcagatcatcgtgcagtacatcgacgaggtcttctccggcgccggcgactccatcctccccgccgacccatatgaacgcgccgttgctcgcttctgggccgcatacatcgacgacaaggtttgagctcttctgaatttgtgtgaatctctgcactgccatggtgatgatgatcgaatcttctgaatttgtgtgaatctctgcactgccatggtgatgatgatcgaatcgttgacgagatgtgtgtgctctcgtgcgtgcagctactggcgccatggaagaaggtattcagggccaagacggaggaggagagggccgcgtggatgaagcagatgttcgtcgcggtggacgttctggagggaggcctgaaggagtgctccaaggggaagggatgcttcttcggcggcgacagcgtcgggtacgtcgacgtcgtgctggggggtgccgtctccttcgtgcacgccaacgacatgatcaccggtggaaagctcttcgacgctgcgaggacgccgctgctggcggcgtggttggagcgcttcggcgagctcgacgccgccaaggcggtgctgcaggacgtcgacagggcggtggagcacaccaaggtgcggtacgcacggaatgccgccaccgccgcaaacgactgaattagttaagttaagcaggcgtggctacgtacgtgtctccggttggctagcttgctcggacaaatgtacgtctggattagactagattgctcaatattttcactagctgttgtcgttacactactatagaaacacacatgcatattgacactatataagtgccggaacagccaaaaccgatacatatagtgtttctctcatctctacgggctgaaaattaaaagaaataggaacctttaaacaaaggtgctagtttcagagaaaaaccggcacctacactacatgtatctttttttaaaggtacctacaatatattattggtgtcggcttttaattaaccgacacctataatatactgtaggtatcagtataccataggttatcagttctttcaaaaaccgagccgagcgcgacatctcccgtccttatccgtacttgcccccccccccaacacaaatctctcgttctcccacgcctcctctctcctcccccgccccctcctcctctccctctcacctccctcccacagcagatccaCccccgcggccgccatggatccaccctcggccgccaccagatccactcgtggctgccgctgacattgccgccaccaccgaatctgctgtgggagggaggcgagaagggacagagggagccaccgccgccggatccacccgtggctgccgctaacgttgccaccaccgccggatctgctgtgggagggaagcgagaagggacagagggagctgccgccgccggatcagcccgtagtctccaccaccgctgccagatccacttgcggctactgataacagcgccactggcgccggatctgccgtgggagggagacgagagggagcggagggagccgccgccgctggatccacccgcggctgccaccaccgccgcatccaccagcgcgcgttcgccgccatctgccaatattctactcttctctggaggagtattattttagcaggagacgggtgttccatgacttgtgcggcaagtacacagcagagtgtatttttcaatggcaaaagtttgttaattcattccttgctgattaattggctccccaaagaacactcaatgtcacgattacttgtaaatgttagactttgctctaggatcacctaggttagatctccttttagggtcggaatatctttaatgcaacccatcaaggagtagccacccgaaataatcatgtgcgatgagaacaaaattaacattaaaatattatgcattaagcatatatcaccgttgggcagaattagacataacacatatcaccataactataatattgtaattatcaacgttggtcagaaaaattacatcatagcacataattaatattcctaaaattaaattctcccgttggttcgaaatttaattttagaaacactaattttcatcaatttcgtctatttgcagcggaaaactatataaaaatcatatgaacagtagcaaaatctctgtaattctctctctgtgaaaattctcccattggttcaaatttaaacagaggtaaaacatgcaaaaatctattcaaaattctattgaaatttgcatgaaaaattgacaaaataaaatggaaaaattgctactgttctcttttattcattttcggcccccgagggacctcatatgaactttttccggtcagcccgcggcctttttggcgcgcgcgggcgctgccccctccccccaggccgcatcctgggcctgggccaggaaagtcgccgcgcgcgctctccctcttgggccgtttttggcccgaccgccgccagccgtccgatctgctagggcttcgatcggacggccgggaggggagatcgggagatcaaaacccgaccccccagccgccggaaaccctagctcctcttctctcgcgggcgtgcggccgcgccgagcggcgtcgccgacgccggcggccctcgcgccgccgcgccatgaccggcgcgcctttcttttctcttcttctccgctccccctaccgtctctaacccccaccgtgtgagagagagatggcggcggccgaaaagacggagatggcggcgccgccgcgggctccctcgccggtgcgcgcatgcaccggcgggtgcgcgcacggccgtcgagtggctcctcggtggtgccctttgccctccccccttttgccggcgatggccggcgacaaggtagggttagggtttcgatcttttgatccgtgcggatcttgtgcttttctttctttggatttcttttcccgaaccgatctaatcactagggttgctctgataccattgttagactttgctctaggatcacctaggttagatctagtcgggtggttctatttgggattgatgtttgaactatagagattgaaagcgggagagggtttagatagaccgaccggttgaggtgttggaggatgaagaagtgccggccatcgtcgtcgttagcgctcgattgtcgtgggtgcggcgccggtgaggtcgacggcgatgacggctgcgggagtgacggtcgtagatgtcccggcaatgaggtgtggcgcggcggtggcgcttcccgtcactggctgcatcccctctcgatcggattagggtttgtagggtgcagttggcggcggcggtgaatctcgtactctgtgccgtgccgacctccacccctcttttatatggcgcagtgtgacgggggctcaccagccattgggctggacgcccctaatcagggcgtggtcaaggtccgttgtgccgttgggcccgacgggtgggagatctatctaacagtaaatagctagtactagtaatcatatccatcaaacgttatagcatgagcgtcatggatgatgcattgtaatgtttcgtgccttttccctcgctgcatatttatacctctactcaaggcgatctcgacaccaaacaagcacaattaatctgaataattgaagttcagagcagcagattaatactcctaattagtcctaccgaaatggccgcagaaggtgagctgaagctgctgggaacatgggcgagcccctacgtctccagagtgaagctcgccctccacctcaagggcctgagctacgagtacgtcgtcgaggaggatcacttcaacaacaagagcgagctcctcctcagctccaaccaggtgcacaagaaggtccccgtgatgatccacaacggcaagcccatctgcgagtcgctgatcatcatggagtacctcgacgaggctttccctgacaccgccgcacctctcctccccgccgacccgaccgcgccgtcgctcgcttctgggccgcctacattgacgacaaggttatcactttgatcggtctgcgtgttaattaaactgatcagaagttgatgtatatatacgaatgcttctgcagctagtgccctcgtggaagcaggcgttcagcggaaagacgggtgaggagaaggcagaggggatgcgtcatatgctcgcggcggtggatgcgctggaggcggcgatggaggagtggtccaaggggaagcccttcttcggcggcgacgccgtcgggttcctggacgtcgcgctggggggcttgctctcctggttgcacgggacagaggagctgtgtggcgccaagatcttggacgccgccaagaccccgctcctgtcggcgtgggcgcggcgcttcggcgagatggacgccgccaaggtggctttgccggacgtctgcaagctggtcgagtttgccaagatgaggcgtgttcagctggaggctgcaatggcagctacaacagtttcccgcaactgaatgtgttgtcaggttgttgtgttgatgtgttcctacaactgaataaaccgtactttaaaatttaaataactaaatatttgactaataatattttattataaattaagttgtgtttgataaaaaataatatcattgaattggattgaaatttgaatttactttcacaaatttgtgaacattatatatttgagaaattcaaaatatatttaaccgtgtcaagtttaatcgcgccttaaacaatgtaatagattagtgtgatagaggggagtaatacaggcttgttcactttgatgccatttttaaccataccttttttttttgcaaagttgcccaaaaaaagtatgcgtttatttttttgccaaatttagtcaatacacaagaaaacctgtcaaaattttggcaaaattttaacaatattgttattttgtcaaaattttggcattgctaaaacttggtaaggtttattttggctacaatctgaacaggctctacgtatggagtagctcaggggtcagggctagtttggattgctaccttaccaaaattttggtaggatgacaaaccAaaaatgtctattaaaacactatatttgtcacaaatttggctttgcccataaacttgtttcttataggtatattttggcttcaatccaaatgaagattattaactttatcctatcaaagttggtagtaccaaaacttatctacgatttggtagtatcaaaattttggtaagatatcaatccaaacatgcaccaataatctctatgggaacatctaataatttcaccaatctaatctcttctttctataaagctaatacccactacactcctaaagctaaacatgcaagcatagtatttattagcactactaagacctacatgcaatcatgccacatcaaccaattaagcttacaaaactcaacatgcgaacacatagtaattatatctacaattcattttattctaaaactaaacatacacatgctaaatcatcatctcaaatcgtttttataatatttcaatctaaatcattcatcatttctccattatctaatatatataccgcagcaaagcgcgggactagtcgattgctaaagtctgtatgctgtggcttgttagagagagaggatctaatagtccgtccgcgttgggttgggccaaaagtatttggtcacataagattgggcctaaattgcacaaagtgtcgtctcatctgtgctctgtttcggcctagatcgcacaccgccaattcgtcatgtttgacgtacaacagcaagacacccagttgttgacttctaatcagtactctgcttccccaatcccaacctgcgtgcgagattgggagaaattgccgctccgttttgtgtcgttttgtgtattttctccactcaaaagaacagaaactattgtgctactatcatactacaaatacacgcggtcaacctgtaagattgtttctttgaaaacgaagttgcacaaatcgttgtgtgtaatgcagacacccgtcaacctacaaaattcaaacaatggtttcttttttctttttttttactggtgagagcaatagattagccttcggatcaatgactcggtgtactttcaaagaaaaaatttgcagaaaaaaaatcgacattatattgtcaaagatctacaagctttcttactagcttgattcacatgcccactgacaatattttatcattatagcagaagaagggttctatagcttgagcagcaagtactacaacagagtaatttttaaatggctagtttcttaatctactccatgctgactggctcctaggttcaacgtcacaatctcttgcaaataggtgtggaaaattatatccatcaaaccatagcatgagcatatccttcccgaactgcaatgtttatatagatactgcagcaagcacaattaagcatttaagctgaagaagtagttcagacttgtacactattagtgaaacacgcatcagtataggaaatggctgcagaagatgagctgaagctcctgggattttgggcgagcccctacgtttgcagagtgaagctcgcactccacctcaaaggcctgatctacgactatgtcgaggaggatgtcttcaccaacaagagcgagctcctcctcagctgcaacccggtgcacgcgaaggtccccgtgctcatccacaacggcaagcccatctgcgagtcgcaggtcatcgtacaatacatcgacgaggtcttccccgacgccggcgtcaccctcctccccgccgacccccatgatcgcgccgccgctcgcttctgggccgcctacatcgacgacaaggtttgcatgatcgatcactcattggcttgatcagtgatgttaactttagcattttgatctgccgatgtgctgaactaatcaaagattgacgtgtacgtgtgccgtgtgcgtgtgcagctactgcccccgtgggtgcacgcgtacaggggaaagacggacgaggagaaggccgagaggatgaagcagacgcttgcggtggtcgacgcgctggagacggcgatggaggagtgctccaaggggaacgccttcttcggcggcgacaccgtcgggtacgtcgacgtcgcgctggggggcttgctctcctggttgcacgggaccgaggagctgtgtggcaccaagatcttggacgccgccaagaccccgctcctgtcggcgtgggcgcggcgcttcggcgagctggatgcagccaacgcggcgctgccggacgtcggcaggttggtcgagttttgcaagatgaggcatgtcgagctggaggctgcagaggcagcagctgcgcgcaactgatcaatattggggaagctattttgatgcttcgaggggatgtttactcgttgtttgcatgtcacttaaatggttataaaaaaattatgaaaaatatattaacatgtgatatatcagttcataaacatgcaagtttaaattcaacttctatatcttacaacgaaaaaaaataaatttgactgagaatatatgttaactagctgatgtagaagttgaatttaaacttacatgtttgtcaagtgatatatcatatataaatacatcttctcaaatttttcataatcatttgagtgacatgaaaactatatagggatattcccttgagagatcaaaatccactcccacaatattatcactcttcccgttggtgttgggctgttggagacttggagagttggagcgcgtgctttgcacctccatctgtccatttctttcattatacacagtagtaatacgaagtatctaaatatgggtaattttagcatttttaaaaagatatcgggtgtactatattttctattttctagtataaaacttgttatcttcataaactagaattagattgaataaaaataatatcgttggattgtattgacatttaaatttactttatataattgtaactttttacaacaaacatcgtagtattcgaaaaattcaaagtatatttaactatgtcaagtttgattgcgtcttaatcagtatgacagagaaagtaatatatatggagtagctcaataatctctatgaaaaaaaaatttaataatatcaccaatctaatggatggctgaagtctgtatatatggccatgtttgaagaactagtcaagagttattttgagagctattttttagcataaggaaatagccctctaataaaatagtcctaagttgtttggatccaatggttattttgagagctatttagcatttaatgcactttcccatggagagagagaaaatacactttttagtgggccccacccgaaatagccctaattagcatcccttgaggataggtttttttatgggttatggccctgtttggatctaagggatattttttagctctccctcaaatagcccaaatagcctaaaaaaatccaaaagggtaagttatttgagggctatttggaaatagcccacccaaaaaaactatcccacccaagaggtgctaattggagctattttggttggggcccacaaaaaagtggcttttctctctcccacaggcgcacgggatcagaaaacccaaaggaaaaaagctgcccgctccttcctctctctccgcacgaccttatccgcgcgcgcaggggcctctcatttcgccgccgccgccgcctccactcctcgccggcgaagcggccgtcgcctgccgcgccactggcccccaccagcgccgccgcctgcactcctcgccggcacggcggccgtcacccgcggcgccgccggcccccactagcgccgctgccccaactcctcgcaggcaccgttgttattcctcctccgcaccagcgccgccgtccccactcctcgccggagcagcggccgtcgcccgccgcgccgccagccctcaccaacaccgccgcctccactcctcgccggcgaagcggccgtcgcctgccgcgccgccggcccccaccaacgccgccgcctccactccttgtcggcgcggcggctgtcacccgcggcgacgtcggcccccactagcactgccgttattcgttctccccacccgaaccgccgccggtcggcgaggatttccatcatctgcacaactactgccggccacaccaagacacatgcgcaaaagatcctgtggaaagagagagaaaagaggtagttatgattgggaaagtgcactaaaggctaaatagccctgggatccaaacagctcaagggctattttattggagggctatttcttgtgtaaaaaatagctctccaaataactctgggctacttctccaaacaaggcctatttccaaatagccctaacagctcacctgtcaagaacttttaggctatttggactatttgagggagggctaaaaaatagcccatcgattcaaattgggcctatgttgtggcttggagggaggatctaatagtccgtccacgttgggttgggccaaaagtatttggtcacacaagattgggcctaaattggacaaagtgctatctcatctgtgctctgtttcggcacaccgccaattcgtcatgctttgacttacaacagcaaagacacccagttgttgacttctaaagttctaatcagaactctgcttcccaacctgcgtgcgggcttgggagaaatcgccgctccgctgccgcctgccgcacccattttaccgccggataacgtgtttccagcggtgaatgactcatgggattcgaatactatcttatgggttgacaaccaccgcgccggtcgcctgcggtttcctcactttcgatggaccgtgtgcactgttgcacatcaccaagtatccttgtcgacgaacagtgaatcaatgccactgattcagactttgatgcatccatatccaaccatatatacctctctacctcctcgtgatcaacaacacaaactgcaaacaaattaaatcgagtagtagctgatactgccggacttggtcggatcggagatggccggaggaggagatgagctgaagcttcttgcgacatggttcagcccgttcgcttccagagtgaagttcgtgttccatctcaagggcctgagctacgagaacatcgaggaggacctcaagaacaagagcgatctcctcctcaagagcaaccccgtgatcaagaaggtccccgtgctcctccacaacggcaagccgctgtgcgagtccatggtcatcgtcgagtacctcgatgagaccttcgccgccgtcggcccgtccgtcgtccccgccgacccctacgaacgcgccgtcgctcgcttctgggtctcctacatcgacaacaaggtgaaatactctcttgtgtacagtgcatctcccgtgtcagagcatatgaaatggtctagctgatgtcaagcatgaaaacgcatggctgtgcagctggtggcgccatggttccaggtgttcaggggaaagacgaaggaggagaaggcggaggggctgaagcagatgttcgaggcaacggcggtcatggaggtggcattcagggagtgctccaaggggaggcccttcttcggcggcgacgccgtcgggatcgtcgacgtcgcgctcggcagccagcttgggtggctgcgcgcgtcggagacgctgtccgggatcaagctgttcgacccggccaagacgccgctcctgctggcgtgggcggagcgcttcctcgcgctggacgcggcgaaggcgtccatgccggagtccggtaggctgctcgcgtatgccaagatgaggcaggccgagaccgatgccgccaatgcaagcaagtgatcacctgcgagctgcgacgtcgctctactgcgaggaacgaacccctgaacatgtttttttggggggaatcgagttaaaataatatggcacgtgcacggtggtggcacgactgttgcacgactggaaattgtgttttcttatgaccaataaaatAaaatattctgcacac
More
|
||||||||||
| CDS seq | atggccgcagaaggtgagctgaagctgctgggaacatgggcgagcccctacgtctccagagtgaagctcgccctccacctcaagggcctgagctacgagtacgtcgtcgaggaggatcacttcaacaacaagagcgagctcctcctcagctccaaccaggtgcacaagaaggtccccgtgatgatccacaacggcaagcccatctgcgagtcgctgatcatcatggagtacctcgacgaggctttccctgacaccgccgcacctctcctccccgccgacccgaccgcgccgtcgctcgcttctgggccgcctacattgacgacaagcggaaagacgggtgaggagaaggcagaggggatgcgtcatatgctcgcggcggtggatgcgctggaggcggcgatggaggagtggtccaaggggaagcccttcttcggcggcgacgccgtcgggttcctggacgtcgcgctggggggcttgctctcctggttgcacgggacagaggagctgtgtggcgccaagatcttggacgccgccaagaccccgctcctgtcggcgtgggcgcggcgcttcggcgagatggacgccgccaaggtggctttgccggacgtctgcaagctggtcgagtttgccaagatgaggcgtgttcagctggaggctgcaatggcagctacaacagaaatggctgcagaagatgagctgaagctcctgggattttgggcgagcccctacgtttgcagagtgaagctcgcactccacctcaaaggcctgatctacgactatgtcgaggaggatgtcttcaccaacaagagcgagctcctcctcagctgcaacccggtgcacgcgaaggtccccgtgctcatccacaacggcaagcccatctgcgagtcgcaggtcatcgtacaatacatcgacgaggtcttccccgacgccggcgtcaccctcctccccgccgacccccatgatcgcgccgccgctcgcttctgggccgcctacatcgacgacaagattgacgtgtacgtgtgccgtgtgcgtgtgcagctactgcccccgtgggtgcacgcgtacaggggaaagacggacgaggagaaggccgagaggatgaagcagacgcttgcggtggtcgacgcgctggagacggcgatggaggagtgctccaaggggaacgccttcttcggcggcgacaccgtcgggtacgtcgacgtcgcgctggggggcttgctctcctggttgcacgggaccgaggagctgtgtggcaccaagatcttggacgccgccaagaccccgctcctgtcggcgtgggcgcggcgcttcggcgagctggatgcagccaacgcggcgctgccggacgtcggcaggttgatggccggaggaggagatgagctgaagcttcttgcgacatggttcagcccgttcgcttccagagtgaagttcgtgttccatctcaagggcctgagctacgagaacatcgaggaggacctcaagaacaagagcgatctcctcctcaagagcaaccccgtgatcaagaaggtccccgtgctcctccacaacggcaagccgctgtgcgagtccatggtcatcgtcgagtacctcgatgagaccttcgccgccgtcggcccgtccgtcgtccccgccgacccctacgaacgcgccgtcgctcgcttctgggtctcctacatcgacaacaagctggtggcgccatggttccaggtgttcaggggaaagacgaaggaggagaaggcggaggggctgaagcagatgttcgaggcaacggcggtcatggaggtggcattcagggagtgctccaaggggaggcccttcttcggcggcgacgccgtcgggatcgtcgacgtcgcgctcggcagccagcttgggtggctgcgcgcgtcggagacgctgtccgggatcaagctgttcgacccggccaagacgccgctcctgctggcgtgggcggagcgcttcctcgcgctggacgcggcgaaggcgtccatgccggagtccggtaggctgctcgcgtatgccaagatgaggcaggccgagaccgatgccgccaatgcaagcaagtga
More
|
||||||||||
| Protein seq | MAAEGELKLLGTWASPYVSRVKLALHLKGLSYEYVVEEDHFNNKSELLLSSNQVHKKVPVMIHNGKPICESLIIMEYLDEAFPDTAAPLLPADPTAPSLASGPPTLTTSGKTGEEKAEGMRHMLAAVDALEAAMEEWSKGKPFFGGDAVGFLDVALGGLLSWLHGTEELCGAKILDAAKTPLLSAWARRFGEMDAAKVALPDVCKLVEFAKMRRVQLEAAMAATTEMAAEDELKLLGFWASPYVCRVKLALHLKGLIYDYVEEDVFTNKSELLLSCNPVHAKVPVLIHNGKPICESQVIVQYIDEVFPDAGVTLLPADPHDRAAARFWAAYIDDKIDVYVCRVRVQLLPPWVHAYRGKTDEEKAERMKQTLAVVDALETAMEECSKGNAFFGGDTVGYVDVALGGLLSWLHGTEELCGTKILDAAKTPLLSAWARRFGELDAANAALPDVGRLMAGGGDELKLLATWFSPFASRVKFVFHLKGLSYENIEEDLKNKSDLLLKSNPVIKKVPVLLHNGKPLCESMVIVEYLDETFAAVGPSVVPADPYERAVARFWVSYIDNKLVAPWFQVFRGKTKEEKAEGLKQMFEATAVMEVAFRECSKGRPFFGGDAVGIVDVALGSQLGWLRASETLSGIKLFDPAKTPLLLAWAERFLALDAAKASMPESGRLLAYAKMRQAETDAANASK |
||||||||||
| Function | Probable glutathione S-transferase GSTU6 [UniProtKB/Swiss-Prot:Q06398] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_10g0018030 | OsNaBo_10g0018030.01 | Chr10 | 22470892 | 22482017 | + | NAM | ||
| CDS seq | atggccgcagaaggtgagctgaagctgctgggaacatgggcgagcccctacgtctccagagtgaagctcgccctccacctcaagggcctgagctacgagtacgtcgtcgaggaggatcacttcaacaacaagagcgagctcctcctcagctccaaccaggtgcacaagaaggtccccgtgatgatccacaacggcaagcccatctgcgagtcgctgatcatcatggagtacctcgacgaggctttccctgacaccgccgcacctctcctccccgccgacccgaccgcgccgtcgctcgcttctgggccgcctacattgacgacaagcggaaagacgggtgaggagaaggcagaggggatgcgtcatatgctcgcggcggtggatgcgctggaggcggcgatggaggagtggtccaaggggaagcccttcttcggcggcgacgccgtcgggttcctggacgtcgcgctggggggcttgctctcctggttgcacgggacagaggagctgtgtggcgccaagatcttggacgccgccaagaccccgctcctgtcggcgtgggcgcggcgcttcggcgagatggacgccgccaaggtggctttgccggacgtctgcaagctggtcgagtttgccaagatgaggcgtgttcagctggaggctgcaatggcagctacaacagaaatggctgcagaagatgagctgaagctcctgggattttgggcgagcccctacgtttgcagagtgaagctcgcactccacctcaaaggcctgatctacgactatgtcgaggaggatgtcttcaccaacaagagcgagctcctcctcagctgcaacccggtgcacgcgaaggtccccgtgctcatccacaacggcaagcccatctgcgagtcgcaggtcatcgtacaatacatcgacgaggtcttccccgacgccggcgtcaccctcctccccgccgacccccatgatcgcgccgccgctcgcttctgggccgcctacatcgacgacaagattgacgtgtacgtgtgccgtgtgcgtgtgcagctactgcccccgtgggtgcacgcgtacaggggaaagacggacgaggagaaggccgagaggatgaagcagacgcttgcggtggtcgacgcgctggagacggcgatggaggagtgctccaaggggaacgccttcttcggcggcgacaccgtcgggtacgtcgacgtcgcgctggggggcttgctctcctggttgcacgggaccgaggagctgtgtggcaccaagatcttggacgccgccaagaccccgctcctgtcggcgtgggcgcggcgcttcggcgagctggatgcagccaacgcggcgctgccggacgtcggcaggttgatggccggaggaggagatgagctgaagcttcttgcgacatggttcagcccgttcgcttccagagtgaagttcgtgttccatctcaagggcctgagctacgagaacatcgaggaggacctcaagaacaagagcgatctcctcctcaagagcaaccccgtgatcaagaaggtccccgtgctcctccacaacggcaagccgctgtgcgagtccatggtcatcgtcgagtacctcgatgagaccttcgccgccgtcggcccgtccgtcgtccccgccgacccctacgaacgcgccgtcgctcgcttctgggtctcctacatcgacaacaagctggtggcgccatggttccaggtgttcaggggaaagacgaaggaggagaaggcggaggggctgaagcagatgttcgaggcaacggcggtcatggaggtggcattcagggagtgctccaaggggaggcccttcttcggcggcgacgccgtcgggatcgtcgacgtcgcgctcggcagccagcttgggtggctgcgcgcgtcggagacgctgtccgggatcaagctgttcgacccggccaagacgccgctcctgctggcgtgggcggagcgcttcctcgcgctggacgcggcgaaggcgtccatgccggagtccggtaggctgctcgcgtatgccaagatgaggcaggccgagaccgatgccgccaatgcaagcaagtga
More
|
|||||||
| Protein seq | MAAEGELKLLGTWASPYVSRVKLALHLKGLSYEYVVEEDHFNNKSELLLSSNQVHKKVPVMIHNGKPICESLIIMEYLDEAFPDTAAPLLPADPTAPSLASGPPTLTTSGKTGEEKAEGMRHMLAAVDALEAAMEEWSKGKPFFGGDAVGFLDVALGGLLSWLHGTEELCGAKILDAAKTPLLSAWARRFGEMDAAKVALPDVCKLVEFAKMRRVQLEAAMAATTEMAAEDELKLLGFWASPYVCRVKLALHLKGLIYDYVEEDVFTNKSELLLSCNPVHAKVPVLIHNGKPICESQVIVQYIDEVFPDAGVTLLPADPHDRAAARFWAAYIDDKIDVYVCRVRVQLLPPWVHAYRGKTDEEKAERMKQTLAVVDALETAMEECSKGNAFFGGDTVGYVDVALGGLLSWLHGTEELCGTKILDAAKTPLLSAWARRFGELDAANAALPDVGRLMAGGGDELKLLATWFSPFASRVKFVFHLKGLSYENIEEDLKNKSDLLLKSNPVIKKVPVLLHNGKPLCESMVIVEYLDETFAAVGPSVVPADPYERAVARFWVSYIDNKLVAPWFQVFRGKTKEEKAEGLKQMFEATAVMEVAFRECSKGRPFFGGDAVGIVDVALGSQLGWLRASETLSGIKLFDPAKTPLLLAWAERFLALDAAKASMPESGRLLAYAKMRQAETDAANASK
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0528200 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g38160 | RBH | 0.856712 | 1.084209 | 0.303403 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0528100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0017860 | RBH | 0.0 | 0.000000 | 0.695852 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0018340 | RBH | 0.150476 | 4.599095 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0017680 | RBH | 0.435518 | 0.0 | 0.658149 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0018220 | SBH | 0.214889 | 0.184035 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0017940 | RBH | 1.095018 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0336900 | RBH | 0 | 0.1900875 | 0.0197165 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0017790 | RBH | 0.175770 | 0.441461 | 1.026230 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0364000 | SBH | 0.0431255 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0017660 | SBH | 0.356700 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0017410 | RBH | 2.369236 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0018070 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0017670 | RBH | 0.0 | 0.0 | 0.228837 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0018050 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G017690 | RBH | 0.000000 | 0.000000 | 0.406824 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0017980 | RBH | 0.0 | 0.0 | 0.0 |
