Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_10g0018010 | OGI:10062680 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr10:22455809-22460038 | ||||||||
| Gene Symbol | GSTU3, OsGSTU3, OsGSTU29, GSTU29, Osgstu4, GST, GSTU14, OsGSTU14, GSTU18, OsGSTU18, OsGSTU7, GSTU7 | ||||||||||
| DNA seq | atggctggagaaggagatgatcaactgaagcttctcggattgtgggtgagcccatacactcaccgagtgaagcttgcactcagcttcaagggcctgagctacgagtacgtcgaggaggacctcagcaacaagagcgagctgcttctcagcaccaacccggtgcacaagaaggtgcccgtgctcatccacaacggcaagcccatctgcgagtcgcaggtcatcgtgcagtacctcgacgaggagttccccaactccggcgtctcgctcctcccatctgactcctacgatcgcgccattgctcgtttctgggctgcctacatcaacgacaaggtaatcgtcAaattgcctcggttaatcgatctgaatttgcatcgattgatgtgatgttgtgtgcgtgtgctcgcgtgtgtcgtcgttgcagctgatgccgtcgtggctgcagtcgtcgatgggcaagacggaggaggagagggcagaggcgctgaagcagacgttggaggcggtggcgaacctggagacggcgttcaaagagtgctccaaggggaagcccttcttcggcggcgacaccgtcgggtacctggacgtgtcgctcagcgccatgatcggatggatgcgcgccggcgaggctctgcacgggaggaggaccttcgatgccactagaagccctctcctgaacgcgtggatggagcgctttgccgcgctggacgccgccaaggccgccatgccggacaacaacaagctggtcgagttcgtcagggtgaggcgggctgccgctgcgaacaactgaagccgaaacaatactgtattggtcagttcccagttggtacgagatttgctctgctccaacaaagagtatcttaaggtattaatacctcacggtaccaaatcgtttctaaccgttaaatctaacaatgtccatcgatggaaaacgatttagtactgtaaggtaccacctcaattactttttgctgaaccgaaacaaatctcctcgtcactgctttgggcctttggccaattgtcatttttcaagttgcAaaagtgtgatgttcttccgggtcatccgttcgatcggatctccttgttaccgggacatcatttcttccaataaaggaaaatgttgaattttggtatttaaattgtttagtagtatgtgatataaaaactgaattttctatttcaattgcgtgcctagacgtcagattgttcaaccagatgcatatgctccagatgaatacatgttatttAaatagttgcataataaattgaataaatatattacaatgatatagtcattatatacggacacataattagctaggttttctctggagtgaTtttttacattccttgaggaggtaacgggatgtacaatattttctaatataaaatttattatctcttaatacctccagtaaggaatggaaatttgcacagtactacctctcaaggaccgtaaaatttctcttttctctaagtgcatatcaaatttagcgtatatgactcgtgtcatcataatttatcctataaaaatctttgaTttttctatcaacatttaatctgcatggaaataattaatgtatatatgcattactacctctccttcgtaacttcaggaatggatggtatgtatgtctcaatctttattggcccctttattttagttggtgatgagagtgtatgatggcaaactcatcgtcaccaacaccaactgcctcTtttaaataaaaaaattgatgtagcagagacttttttttctcattatcatatattgtatatgatgtttggacaaatgattttaagcctgcaatggcgaactatatcatttctcacatgccgtttaaatagttataataaaattgaaacaaaataggcaacatacggatgtaaaatgcagatgttattctgaaaaagaaaacataaggggggcaataaagagtgatgctaagtgttcttttgaatggtagtgtgcagttgttattttttcaacatgtatatgtttttgtacaatggagttgcacatgtttcatggaaattaaatgtgcatatttggaaatgtatgttttaatgggaatgtgTttacaATattatttgaattttttcatggaaatgaccagatgtatttcattgaaaatgcAaaaaaaaaaatcaatacaacattgttgccacaatcaaatgttccatgcaacattgtttttgtgggtgaaaaatgggcaatgtacatatgtttttcgtttgaatgaaaatgtgcacatatgtgtcttctttgtatgaaaatgcttaaaatggtagcatttcaaataattattcagatcaaacattagtgtcaccacgccTttttttttcagttgtaagtatgcaccatcctcttgctaggtgtggtggaatgattaggtcatgtaggtagggtccagtagggggctctcatgtattccacatcagaaaaaaaaaacccaccccctacaatggttagttgactttacattaatacatactaattaaatcgtgaatttgcatatttgatctgaagttgcgtttcttcggattgtatagcgcccgtctctCctctcgtctccttgttcttttcgctagatgagccgatgttgcgccgttgtcacctgaagcatcgatgtttccctgctctcatttatctttcttccatgtaagcaaatttatttaggtgacaccagagagagagacggtaaataatagtaaataatagcctttgtacattcccttatgtagttgtgcagtctatttttggtgtgcgagttcggagttcgaagtgttctgaagaatctcttcttgtaatttctagaaatggcattgaggaaattaccagtcttggcttaaaaacaagtctgtctcgtcattcaccgtgcttatttaggacttgttcaactcctgtagaaattctcgaaaattcctcgactttaaatggagccttaccattttttagcagatgcaacaactattatactcctacctgatgactgatgaggactgtgcagcgatcgatatgtgcatgtggccatgtccgaagctaattaaaggacggaaggaccacaagttggtgtataataatggagagggcattgaatcattgtttcaatatccccatcagataatattcaataactcctatggtgacgtcaagcatcaatacatgaaggttacttgttaccaccatcagacaagcatataattgattgctctgatcaagcgatagcaaaacaaaatacaaaccagaacagtctcaaagcttcgcccaagcagagaagaatggccgccggaggaggaggaggagacgagctgaagctgctcggattgtgggcgagcccgtacgtcctgcgagcgaaattcgcgctcagcttcaagggcctgagctacgagaacgtcgaggaggacctccacaacaagagcgagctgctcctgagctccaacccggtgcacaagaaggtgcccgtgctcatccacaacggcaagcccatctgcgagtcgcagatcatcgtggagtacgtcgacgaggcgttccctgacgccggcgagtccctcctcccctccgacccttacgaccgcgccgtcgctcgcttctgggccgcctacatcaatgacaaggtaaaaaacgaccaattgccagagaaatcaagagagaatagctgatgatgaggggtgtgtgtgtgtgtttgcattgtcgtcgcagttcatgccggcgtggcagaaggcgtcgttgggcctcacggaggaggagaaggcggaggcggtgaagcagatgctcgccgcgatcgagaacctggagacggcgttcaaggagttgtccaaggggaagcccttcttcggcggcgacaccgccgggtacctcgacgtcacgctcggcgccgtggtcggctgggcgcgcgccggcgaggtcctgttcgggaggaagctcttcgacgccactaggagccctctcctggcggcgtggatggagcggttcgtcgcgctggacgctgtcaaggcggtgttgccggacaatgccgagctgatcgagtatggcaagatgaggatggcgcactacgccaagcttgctgccgccttggctgctgcgaacaagaagtgagccggcgaagcaaacctgtagttggtgtgtgtccgttctcgttgctcgtggtctcgtggaggatgaaagctggtgcaccatagtccttccacaccgtgaggttgagttgtgacttttttttttcttccagtgat
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| CDS seq | atggctggagaaggagatgatcaactgaagcttctcggattgtgggtgagcccatacactcaccgagtgaagcttgcactcagcttcaagggcctgagctacgagtacgtcgaggaggacctcagcaacaagagcgagctgcttctcagcaccaacccggtgcacaagaaggtgcccgtgctcatccacaacggcaagcccatctgcgagtcgcaggtcatcgtgcagtacctcgacgaggagttccccaactccggcgtctcgctcctcccatctgactcctacgatcgcgccattgctcgtttctgggctgcctacatcaacgacaagctgatgccgtcgtggctgcagtcgtcgatgggcaagacggaggaggagagggcagaggcgctgaagcagacgttggaggcggtggcgaacctggagacggcgttcaaagagtgctccaaggggaagcccttcttcggcggcgacaccgtcgggtacctggacgtgtcgctcagcgccatgatcggatggatgcgcgccggcgaggctctgcacgggaggaggaccttcgatgccactagaagccctctcctgaacgcgtggatggagcgctttgccgcgctggacgccgccaaggccgccatgccggacaacaacaagctggtcgagttcgtcaggaacagtctcaaagcttcgcccaagcagagaagaatggccgccggaggaggaggaggagacgagctgaagctgctcggattgtgggcgagcccgtacgtcctgcgagcgaaattcgcgctcagcttcaagggcctgagctacgagaacgtcgaggaggacctccacaacaagagcgagctgctcctgagctccaacccggtgcacaagaaggtgcccgtgctcatccacaacggcaagcccatctgcgagtcgcagatcatcgtggagtacgtcgacgaggcgttccctgacgccggcgagtccctcctcccctccgacccttacgaccgcgccgtcgctcgcttctgggccgcctacatcaatgacaagttcatgccggcgtggcagaaggcgtcgttgggcctcacggaggaggagaaggcggaggcggtgaagcagatgctcgccgcgatcgagaacctggagacggcgttcaaggagttgtccaaggggaagcccttcttcggcggcgacaccgccgggtacctcgacgtcacgctcggcgccgtggtcggctgggcgcgcgccggcgaggtcctgttcgggaggaagctcttcgacgccactaggagccctctcctggcggcgtggatggagcggttcgtcgcgctggacgctgtcaaggcggtgttgccggacaatgccgagctgatcgagtatggcaagatgaggatggcgcactacgccaagcttgctgccgccttggctgctgcgaacaagaagtga
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| Protein seq | MAGEGDDQLKLLGLWVSPYTHRVKLALSFKGLSYEYVEEDLSNKSELLLSTNPVHKKVPVLIHNGKPICESQVIVQYLDEEFPNSGVSLLPSDSYDRAIARFWAAYINDKLMPSWLQSSMGKTEEERAEALKQTLEAVANLETAFKECSKGKPFFGGDTVGYLDVSLSAMIGWMRAGEALHGRRTFDATRSPLLNAWMERFAALDAAKAAMPDNNKLVEFVRNSLKASPKQRRMAAGGGGGDELKLLGLWASPYVLRAKFALSFKGLSYENVEEDLHNKSELLLSSNPVHKKVPVLIHNGKPICESQIIVEYVDEAFPDAGESLLPSDPYDRAVARFWAAYINDKFMPAWQKASLGLTEEEKAEAVKQMLAAIENLETAFKELSKGKPFFGGDTAGYLDVTLGAVVGWARAGEVLFGRKLFDATRSPLLAAWMERFVALDAVKAVLPDNAELIEYGKMRMAHYAKLAAALAAANKK |
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| Function | Probable glutathione S-transferase GSTU6 [UniProtKB/Swiss-Prot:Q06398] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_10g0018010 | OsNaBo_10g0018010.02 | Chr10 | 22455809 | 22460038 | + | NAM | ||
| CDS seq | atggccgccggaggaggaggaggagacgagctgaagctgctcggattgtgggcgagcccgtacgtcctgcgagcgaaattcgcgctcagcttcaagggcctgagctacgagaacgtcgaggaggacctccacaacaagagcgagctgctcctgagctccaacccggtgcacaagaaggtgcccgtgctcatccacaacggcaagcccatctgcgagtcgcagatcatcgtggagtacgtcgacgaggcgttccctgacgccggcgagtccctcctcccctccgacccttacgaccgcgccgtcgctcgcttctgggccgcctacatcaatgacaagttcatgccggcgtggcagaaggcgtcgttgggcctcacggaggaggagaaggcggaggcggtgaagcagatgctcgccgcgatcgagaacctggagacggcgttcaaggagttgtccaaggggaagcccttcttcggcggcgacaccgccgggtacctcgacgtcacgctcggcgccgtggtcggctgggcgcgcgccggcgaggtcctgttcgggaggaagctcttcgacgccactaggagccctctcctggcggcgtggatggagcggttcgtcgcgctggacgctgtcaaggcggtgttgccggacaatgccgagctgatcgagtatggcaagatgaggatggcgcactacgccaagcttgctgccgccttggctgctgcgaacaagaagtga
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| Protein seq | MAAGGGGGDELKLLGLWASPYVLRAKFALSFKGLSYENVEEDLHNKSELLLSSNPVHKKVPVLIHNGKPICESQIIVEYVDEAFPDAGESLLPSDPYDRAVARFWAAYINDKFMPAWQKASLGLTEEEKAEAVKQMLAAIENLETAFKELSKGKPFFGGDTAGYLDVTLGAVVGWARAGEVLFGRKLFDATRSPLLAAWMERFVALDAVKAVLPDNAELIEYGKMRMAHYAKLAAALAAANKK
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_10g0018010 | OsNaBo_10g0018010.01 | Chr10 | 22455809 | 22460038 | + | NAM | ||
| CDS seq | atggctggagaaggagatgatcaactgaagcttctcggattgtgggtgagcccatacactcaccgagtgaagcttgcactcagcttcaagggcctgagctacgagtacgtcgaggaggacctcagcaacaagagcgagctgcttctcagcaccaacccggtgcacaagaaggtgcccgtgctcatccacaacggcaagcccatctgcgagtcgcaggtcatcgtgcagtacctcgacgaggagttccccaactccggcgtctcgctcctcccatctgactcctacgatcgcgccattgctcgtttctgggctgcctacatcaacgacaagctgatgccgtcgtggctgcagtcgtcgatgggcaagacggaggaggagagggcagaggcgctgaagcagacgttggaggcggtggcgaacctggagacggcgttcaaagagtgctccaaggggaagcccttcttcggcggcgacaccgtcgggtacctggacgtgtcgctcagcgccatgatcggatggatgcgcgccggcgaggctctgcacgggaggaggaccttcgatgccactagaagccctctcctgaacgcgtggatggagcgctttgccgcgctggacgccgccaaggccgccatgccggacaacaacaagctggtcgagttcgtcaggaacagtctcaaagcttcgcccaagcagagaagaatggccgccggaggaggaggaggagacgagctgaagctgctcggattgtgggcgagcccgtacgtcctgcgagcgaaattcgcgctcagcttcaagggcctgagctacgagaacgtcgaggaggacctccacaacaagagcgagctgctcctgagctccaacccggtgcacaagaaggtgcccgtgctcatccacaacggcaagcccatctgcgagtcgcagatcatcgtggagtacgtcgacgaggcgttccctgacgccggcgagtccctcctcccctccgacccttacgaccgcgccgtcgctcgcttctgggccgcctacatcaatgacaagttcatgccggcgtggcagaaggcgtcgttgggcctcacggaggaggagaaggcggaggcggtgaagcagatgctcgccgcgatcgagaacctggagacggcgttcaaggagttgtccaaggggaagcccttcttcggcggcgacaccgccgggtacctcgacgtcacgctcggcgccgtggtcggctgggcgcgcgccggcgaggtcctgttcgggaggaagctcttcgacgccactaggagccctctcctggcggcgtggatggagcggttcgtcgcgctggacgctgtcaaggcggtgttgccggacaatgccgagctgatcgagtatggcaagatgaggatggcgcactacgccaagcttgctgccgccttggctgctgcgaacaagaagtga
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| Protein seq | MAGEGDDQLKLLGLWVSPYTHRVKLALSFKGLSYEYVEEDLSNKSELLLSTNPVHKKVPVLIHNGKPICESQVIVQYLDEEFPNSGVSLLPSDSYDRAIARFWAAYINDKLMPSWLQSSMGKTEEERAEALKQTLEAVANLETAFKECSKGKPFFGGDTVGYLDVSLSAMIGWMRAGEALHGRRTFDATRSPLLNAWMERFAALDAAKAAMPDNNKLVEFVRNSLKASPKQRRMAAGGGGGDELKLLGLWASPYVLRAKFALSFKGLSYENVEEDLHNKSELLLSSNPVHKKVPVLIHNGKPICESQIIVEYVDEAFPDAGESLLPSDPYDRAVARFWAAYINDKFMPAWQKASLGLTEEEKAEAVKQMLAAIENLETAFKELSKGKPFFGGDTAGYLDVTLGAVVGWARAGEVLFGRKLFDATRSPLLAAWMERFVALDAVKAVLPDNAELIEYGKMRMAHYAKLAAALAAANKK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr10 | 22456565 | 22459055 | + | OsNaBo_10g0018010.02 | OsNaBo_10g0018010.01,OsNaBo_10g0018010.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 4.892385 | 2.368940 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0529300 | RBH | 0.980497 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g38489 | RBH | 0.151580 | 0.155636 | 0.141495 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0528200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0017940 | SBH | 0.174641 | 52.893799 | 11.281526 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0018330 | RBH | 0.239858 | 14.093784 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0017690 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0018240 | SBH | 0.0 | 0.468767 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0017970 | RBH | 0.0 | 50.485756 | 11.274575 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0339000 | RBH | 6.009674 | 0.0214915 | 0.015483 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0017890 | SBH | 0.0 | 2.726263 | 0.217561 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0363500 | RBH | 0.1265055 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0017640 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0017450 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0018120 | RBH | 10.529446 | 13.111764 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0017670 | SBH | 0.0 | 0.0 | 0.228837 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0018190 | RBH | 0.0 | 2.067596 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G017880 | RBH | 0.0 | 8.427018 | 2.838704 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0017990 | SBH | 0.0 | 0.000000 | 1.552717 |
