Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_10g0015860 | OGI:10058820 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr10:20705541-20717249 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | gttataaaattggtataatcattgatgttttgatacaacagactctgccttttcatgaaacaaaacagcagtgacacacaacaaaactggagacatcctctaagcaaaacttctcagtatcccccaggacactgccgcggatggcatgactgcacacttgtgccctgccagctccagatgaaccagtgattataatatcttcagagtagatctaccaagacaaaacattcaggattcttcgctggtagtagtaggatgctctgttctattgctgagccgaagctccaactttatgttcatggccgccaactcggaggccaggtatctgaagacgtaaggcatggcgacggtctccatccctttgcttgttttgcaggcctggcaggcaaagttcttgggaggttttacggtggggagcccgagcatgtcgcgcttggctttcttctggctttcggatttgatcaccgtcgccgtcagcaagctcccgcagatggagcacacgtccgcgatatggtagtcggagcaggaatggagcctgtcatgtaggaggtaagaggcaccatgagcgagaagcgcgtctcgctccatctcaccgaaccgaatccctccaccgtatttccttcctcctattggctgtcttgtgatctgatctattcgccctgtggtacgaacctgcgaaacccaacacatccatgagaatctacaagcaatagtgtggaaacattggtgactagataaatagagcaatgaatacttttgatgcatagcattgtagagatcttcaatccgatatcgaatagaaaaggaggaaaaataagccagataacgactttaactatacataataagatggtacacaaataatgattgcccacctgaaatttgtctgagaccatatgacgaaggcgttgatagtatacaggtccaaggaaaatctcacatttcatctcagtgccaaaaactccactatatagaatttctgttccatggtaattaaatccataagaagcaagcatgggtcccagttcatccacaatggaatttgatctctctttaactgagcttgcaaaaggcgttgcatcaatgaacttccctttcagacttccggcctgtgaagacaagacttcagtgagtaaagaaagtaccaagacgctatcatacttaaatgagaagaattggaaacaaggaatctctgtctctctctcgcaacaatcatgatatttctttcaaaatgaagaaaaaaatgcaagcttctctcaacctatgaaagaagtttgtacctttgctgctatcgactctaagagcattgctatagtcattcgtgaaggaaatgcatggggattaatgatgagatctggcctcatcccagtattagcagagaatggcatatcaatatcaggccacaactgcgaacaaactcccttttgaccatgtctgctgctgaacttgtcaccaattataggatttctcacgcgacgcagacgaatattagcctgacaaaaacatgcagtagtgaaaagcatgccaagatgacaaaaaacaaattagaacacactttcacaaacaataatcctactaacattcaagaaatgcattgtgtaacatactaaagttcattggttccaaaagaggctgggtttttttgtagtttaaagaaactgaaggtatttcacttttttcttgcatttaaacaaacacaggcacttagtctgcccTtttttaacaaggtgaatagggatatccacacattattgccgaagataaatttcatccagcacaggatactggaggtggccatggcctcaccttttgtagacgatccttaaaatttgtcccattgacagcaacataatcaatagctgcaggttctgagcccttcagtttgataggccttactgtaccagtgagattgttacagacgctgtagtactgctcatttggaaatatgttctgtttcatacacatacatttgagtacggggaatatcgtcaagaagaaattacactgctaccacttctccacatggtaaaaaattaacttagtacgagcacataactacctctccaatccgaggaaggccatctgattcgattgcagcggtagtgtccctcgaaagattactcttgcaaaagaactccgtaacattatctctactttttgctgataaatcaatgcactcagtctgcagaaagagtacaaaggataaaagaaactaattttagattttgtcaaacttaaggttcaatctataccaagttagatcatccaatcaagatttttccaaaggtactctctgttggtggatactaaacgtgcatactgagatggcattccgaattgaagaatccaaatctaatgctcaggattattcaaatataaaATatagataggtaaactaattttgatatttggatgcctaggcaccaacatccacgtcaagaactgtctgatacatctttacaatcaatagcaacttttgaagaaagaaaacttattgaactactttcaaattaatgcaactgcagtttcacaaaaataaatcaaacatggattcaatattttgcagaactgaaatgtcgcatatatttgtgtaaaagatacccaggttaaagccacaaatctcaaaatagatcaatgggtaatgattcagatgcccagaaaaaggcatcccatcaaaatttgggatggagagtacattaaagatgtgcgtatgccattcgatacacattttgacattaaattcttattagtgttaatgagatatcttcaagagtcaccaaaaaaggggaaaaaacatttacttacctggaaaatatgcccacggaacatcccacgatcaacagcggatttattcaaaatcatggcatcctccatatcatacctagattgcaataccagttctatgattttatcatgttaaagttcaaacaaatgatcattacacaacataatgaaatgctcaccctgtgtatgatagcaccgcaacaatagcatttgttccggatgggaactcatccatgcaatacttgctatatgtagctgtccggacaattggtgtctgaggggtctgaaaaaatatttatatgagccacctgactggttataaaaaaggattttcaatgcaatcatttctgcatgatatgttatcacataattaagtacttagaaacagacaatttcattgattttgggctctagcaaacacatacggttacgccaaacataatgagcagacctagttttctaacaaccataagcttgaggggatccgaggttttttttttttaactaaacctctcaagccacggagatgtttcacaattgctgacagggttttattacacttaataattccataatacagccatgagaaacaggaagtgttcaaaaggcacaaaattagcaaacctgccaagagcaggatgacatacatctgccaccaataaatgaaaatagtaccaattaaaacacttgatacaacagaaccacaaattatctttacatggcacaaaccatttgctcctaaggttgtcaacatgttattgggcaggtacatattcaacagaaatagagcaacttctaacaaccaaagaagtgtagctaatgatagttggttagtaattattgcacaggaaaacaaacctgtagatgaaatgcttttacatcagtacggaattttagagcttggccacagaatcccatggtttgctttgccatctgtgaacaagcaagcaggttagcaggtctagAaaaaaaaggtctcagcattcattatgcgtgagcaaTtttcattatgcatgagaaattgatttacagtaagggaagatctggctactgacctgacattggtacatgttccgaggactttgattgtgatcagaccaaggtgtcaaatttgcaactacactaagaatggctgtagggtggatttcttcatgagttgcaggaaataatttgtttcttccaccatccccaccatcagggcatcgtatttccatgaatgcctaatgtagaatgaaaaattagtcatcttgtaataataaactaatataggaccattgaagtggataaaagggaacctgttcaaatggtccaatcagctcaatatttggccctccattggatagacctaagagacttctgaccggacgaagaaatctagctggattggtgaaaaggtatagtccaggataagccccaccatggcttaagggtacataacccacttccaaatcctctggaatctaaacagaattaaaagcactgatatgagatagaacttgaggaaaaataaactatctaggaaaaataacagcagtattagagagcagacccctgaatgtggaagcaattttaaacttctaagatgatttactacttcttcaatcttagcagaagcgatggaaccaacaatgcatccatccacatggacatgtaggacttctggaggaccagttcgctctatcctcggcaacagttgggccattccagcgccaaccaaacgagcaataagtgacatctttattttctgaaaatctttagttgccccttctgagttgtaaaaggatgaaatacctgtacattccaaatttaactgatgacactctcccccaaaatgaaaatcacacacacacacaacagcatttagtgtagcagtttcttacggcatgtggaagtcatatggttcagtaaaccacaaggctctccatcaggtgtatgaacaggacagaggaaaccccatgacctacatgataattttcagtacaagcaatatcggagcaagacaagaacaataaattggtaaggtagtttaacatactctggaagcaacttcctcacagatgtcgtacgcattttagcaaaactagaacccctatgcacagaccggaaatgcgaaatataacgatgaaagttgagccgttcagcatgaatggtcatcccatctcgctgcaaatttaaaaggtgcttatcacatataaaaatgatctgagaggactgtgaacacaaacaacattgaacttaactgaaaatgaacgttcttgccaagagattttactacgaacatatatcataatctgtgactcgtgtcaagcatctcttaatcagaagagaaggaatcagttaccaacaaattacttgggatatattgtctgaaaaactaaaatgtaaattgtgggtaagtgatgccttcattatttcaaaacagcctatagccagcattgaagcggtgggttagtggccggtaccccatggccatctccagcactgtgctgccgcagcatgataccttctgctgtaactcaatataatgtgtagtgagcagtgatacttttgaacagatcgttttcagtttttgacgtaattcattttgcatattgttatctttcatcttgaaaacttacttgaagggttgacatatacacagcattacgtaaTttttaatattccctcagaaattaataggtgtaattgagtgtgaaaaagaattaaggtcgaaaaataggagggtggacatgatatccctgctcaaatacctttgaaagaagagataatagttactagggaagttacttagacatgcaagggagagtgtgatgcaataaaccagagcaaacaaggaaaaccatcgacaaattcactcacgagaaaaaatatatacctcacgaaaaggtgagtaaactataaatcacttcactgcaaattgatttagttctttgttgtttttacaattagtgcatcacgatgtgTttttatgctatatgactttgccagtatattatcgccaaatgttatttaaaataccagatgcagtaagcatttgtaagagatgcacctgtggcagatctagccctgattgtgaatttacttttccgacctttatcatactctgaatagctttgccaacatatgctgaagttttactgagaaatttcctgacctcctgtgctgcacaaaagaaaaatagtcgtaactgttataaaagttgtagctggtaTttttatgggatctgctgttaggattaatcttgtggtctgtagtttctgatccgtcatgttaatgattactagttcaagagtttagcatacttgtacaactaccaatactagccataaatgcagagaatgcagtgttcatgcaacacgatttattagacaaaagcctgtttaggggtccaaggtctaggcgtgatgactgcagcaacaagttagtagtttataagtgattagtttcattgcaaataagattagattggtcagtaccagcaatttctataatgttaaaatgtaatctgttcagatagaaagttagagatttggtttgttaggatggtagaaattatattcttaaggatcaagccaggcttcctaaaaacaggacactacgcacccattatagttcagccaagagaatcaaaagttgaagactcaaaacagcagttagatgacctacacccagtcctcgctatgagaaccctaCccccaatcctcatcagccagcaaggctttccactagatgtcttaataactcttgatgtccctttaacttgaccctccagaataaaatctctaacttccaaacaaatcaaatatttaacttgctatctaaaccaaaaaattctataaaatataggatactaattaacatatatactactccctccatccaaaaatatagcagcctagtattggattagacaccacctagcactacgaatatggacagagccctctgtccaacccctctctgtccagattcataatactaggtggtgactaatccagtactaggttgctatattttgggacaaagggagtaactaatattatggaaataggtgatactaaccaaactgatcttattcctatggaaattagtcccaacaagcatgtctagaccttggttcctaagacaataacaacagtggtgatagtaggctacccctcgtccactcctataaagagtacaccagatgttggaacccataaacaactctgggtctctggccatatgaagacttgttggatcatatgaatgcaaagatcactagcattcactcgctgatggatcattagtggattctagtatcgatgtagtatacttcagaaacacaggtcaactaaaaagggttcctgtataaaaacatggatagagtaaacatacagtcattgagatcaaagcttttaTtttttgtagcctcttcaacaattaaccgtttggactttctcaaccaatcttgaagtctatcctggagatgataggaaagaaaaacaagagttaggaaaacagaactggatgtcagaaaagaaatcaaaagcaacaccaacaaaatctcagccataaaataggacatcaaagaaccagcgtcaagcgatgctcacagggaacaaagatgaaacaaatagaataaaaaaataagctcaaaggcacagcaaaagtgcgaagcaaaatatgacttaactcactaccttagcaaaattgggtgaaaaacatcttcgtactacctgtaaccactaccatgcctacactgttaataacctagatcttctgtaccatactaggagcgtgaaataagtactacctccgttccaaagtataagggattccaaaatCccttatattttgggacggaggtagtagtcaatatgcacgcaaaggactactagctcaagctatcaacatagtatgtgctggatgacctgttctaccttagcacctatgcttgaaggaacacatcagcaccagctccaagcagtttaaaaacatccatcttgtaactaacactggtcaattggtcatggtccagcagtccatgcaaatatgtaacagagaaggtagaggcagagaattgaacaagggtagaaaggttaagacaaaaaacttatgctattttatgttatagtattgtttttactaagcacataacattgaatgccatttttgtagtactatggagttgattttcaaaaagggaaaaaaaaaggtcatgagcttgacggcagagggtttagtgacctttagaaaaactgttatcaggtggccaggcaagagaacttcctggtactgtagagcatcagctttatcaggtgacgcagtttgatctacaatcgcataaagtttctgtagcataaatctaagaagtgaaaagtaataagagatacacatcattaaagaggttcaaaaggatagaaattcacagaaaagagcaataaaacttcaacttacatcaataaattaaatttgtcatggttgttttgcaggtgaacaaaaatatagtccttaagaactgcctcagcaacctacacaatgtggaatgaccaaagtgaagcgatccaaatttcaacaacatgcaaagacaaatgcagattaaacatccaatattacagtttcaaaatcatctttctcaaatccttccatcacagatcggaagtactttcctgcatttcaaagataattatcgatgtcagtgactaagaaggattcaaaaatttgtgcaaatagaacaaattaaactctcagataccaagatgcaacaagcattctgtgcgagtaaaaagagacaggtctctgacttcgtcaagaattatttgtgccctttcaccaataagttgagtgctgacaactccctttcctctttcataatgatcactgtagcagcatgtcaagcttgtaaatatttcccggtcactagtatcaattagggcctatcatttgtaaattcacaatcaggtcaatgtactgttaaagttacattaagaatactgccaacctacactaaatatcaaagaatagaagcacaatcaaaatattactttttaaataaaatagtgagagtataaatcaaattatctggtaaggtaacagaataaactacagaaagaggaaagattaatgaaacgcttagaacaaaaaaaaagtttgtaaaatacagcttaattactcaataaatgaaaaatatggaatatttcaagaaagggcttgaggtcgtcactgtagattgcatcatcatccaacaatatatagtagcaatgatttgtaaaacttgatcatgcacaaagaaagcttattaactcaatttccagttagaaaacaataagccccatgaaggaaatatataccttgagaacaatcccaacaggaaggagaaattctctgcctcccaacctgaattttgcacaaattcaagaatcaagttccaaaaactAaaaagaaactcaagcatttccactcacaatttgccagtgcagaacttaccagaacccaagccttgcactgccatttaggaggtaatacagctttattgtcacactggactgatcatcttggacacatctgtcaaaaaaaaactagatatggattataacataaaaaaggtacaactagatacacagacaagtatacttgcaacagcaaaaaaactcagtaacataagcagctatagacaagtatatggcaccttatgatcactgctttgtcagtgtacccagcaccacgattaacgaaagagccacggatcaggcccataggctgaaaaaattcacaccaaaccattcattgccataatgttctctgggttttttttttctaatattagccttgcaacataaatctaaaagaaaagctgagtaatcttacatagttacgtttttgtaaaataagaatccgtacaagtctctccatcccaccacatatgaagtacctgaaagaaaattttacaaaatgcatcagaatgaatacactaacataggaaacagtgtcaaaaaatttgttcagtaacagtagaagaatcaagagtgaatgtgatataatcataacacaatgaatcgatcaataagatccacaggtagtcttaacaagttgaatgactagactaaatgatcggtgtactaagaaatgatagaaagggaagaagatgacataattaagagaatgtaaacaaataaacaagttcataacatactcacccgcccatttctgttgcctcttcaccatggaaaatcaaTttttcagaatctgcacctcttagatggcaaagctttgactggaattgcatgagcataaaatcataaacaagaatagaatacaattcacactaattaaatcaaaaccatcggtcaaataagaacaaataaggtggtgtagagagaagtggaacgtgaaatgaatcctgcatagcttccagaaggaagaaacaataatagttgtctatggctaccaccaaaatgtgatgtatctgcactttttttaatatcgatgctttgggtgttcctaactctacagaattgcagcatagtatgatgcatgcagaattgcagatcagctttcacgaacaactgattataaattattcaaagcagctattatttatcattttagtgtcagaattgtaaagcagcactgaaccgcaaaaactgcataatcatgcttattaatttagatttttggcctattataaagctataaactgacaaaacatcatgacactaataaagtgcataatgtttgattctttccacccaactgatagagaaaagtctcttttttttccaggtaactatatcatattagatagcttagttttcattttttgacttgaagaagcagaagtagcttttgtaccaaagagacaggtgaacttaaccaagacttattggggtgccagactaatgtaaaattgtagaaacacaagctagatcctaaaagcagataacaagctgcactcatatgtggatgctactactcaactaagctgtcagccgctcattcaagttccaaaatccacctagagaagttcttacgaaaaaaatgtgataagaagtacaacaaagaaggggtaacaaccattaacataataggcaagtaaccaaaattgaaggtttgcctgacagctggtccgtcattacattggatgaaagtatccactttaaattccccatgatacgtcgtccgtgcctgcctgcactgctcatccaaacaggaaagaacgtccaaagttttcaatagattaaacaaatgtcttgtgtttaaaatgaaaatgatatgtaaagggatttgataagtccatatagcaaaacctgctgggggtagagcggtgcatccaaccgaccatccctctttggtgggaacagatgacctttctccaaggatagtatagacgacggttaagggaaaatgagatgataaccaagttacttccatagttcattccgtacacaaacaattagcatacacaaatatagcagtccttccaaacctcatctattggtgtcctcgtaagagagtgaaaacgaattcaaacctgcgccttagtaactctatgttggaactactgggtgttggctttattaacaacttgtcagctaagctcggaaagcacgagagctgtcttaaggtaaattcgtagcacataagaattgaattttggatgctgggtggggaaaaactggtaaattcgtactagcacacaaaaaactggtccactgaactgtaagcgacgagcaaaaggtaaaaaaaaaaaaaagcaggaaggatatttctgagggtggtgggggagttggggacggtgatctccacggggcggatggactgaagcatcttgtcgagcccctcgtcgatgaagtagtcgaacgagtcgatgtgcggccggtacagctcccgcagcgccgcgtactggtcctccttggaggccgacgagctcttCccggccgccat
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| CDS seq | atggcggccggGaagagctcgtcggcctccaaggaggaccagtacgcggcgctgcgggagctgtaccggccgcacatcgactcgttcgactacttcatcgacgaggggctcgacaagatgcttcagtccatccgccccgtggagatcaccgtccccaactcccccaccaccctcagaaatatccttcctgcttttttttttttttaccttttgctcgtcgcttacagttcagtggaccagtttttttgcaggcaggcacggacgacgtatcatggggaatttaaagtggatactttcatccaatgtaatgacggaccagctgtcaggcaaaccttcaattttggttacttgcctattatgttaatgtcaaagctttgccatctaagaggtgcagattctgaaaaAttgattttccatggtgaagaggcaacagaaatgggcgggtacttcatatgtggtgggatggagagacttgtacggattcttattttacaaaaacgtaactatcctatgggcctgatccgtggctctttcgttaatcgtggtgctgggtacactgacaaagcagtgatcataagatgtgtccaagatgatcagtccagtgtgacaataaagctgtattacctcctaaatggcagtgcaaggcttgggttctggttgggaggcagagaatttctccttcctgttgggattgttctcaaggccctaattgatactagtgaccgggaaatatttacaagcttgacatgctgctacagtgatcattatgaaagaggaaagggagttgtcagcactcaacttattggtgaaagggcacaaataattcttgacgaagtcagagacctgtctctttttactcgcacagaatgcttgttgcatcttggaaagtacttccgatctgtgatggaaggatttgagaaagatgattttgaaactgttgctgaggcagttcttaaggactatatttttgttcacctgcaaaacaaccatgacaaatttaatttattgatatttatgctacagaaactttatgcgattgtagatcaaactgcgtcacctgataaagctgatgctctacagtaccaggaagttctcttgcctggccacctgataacagtttttctaaaggatagacttcaagattggttgagaaagtccaaacggttaattgttgaagaggctacaaaaaAtaaaagctttgatctcaatgactcacaggaggtcaggaaatttctcagtaaaacttcagcatatgttggcaaagctattcagagtatgataaaggtcggaaaagtaaattcacaatcagggctagatctgccacagcgagatgggatgaccattcatgctgaacggctcaactttcatcgttatatttcgcatttccggtctgtgcataggggttctagttttgctaaaatgcgtacgacatctgtgaggaagttgcttccagagtcatggggtttcctctgtcctgttcatacacctgatggagagccttgtggtttactgaaccatatgacttccacatgccgtatttcatccttttacaactcagaaggggcaactaaagattttcagaaaataaagatgtcacttattgctcgtttggttggcgctggaatggcccaactgttgccgaggatagagcgaactggtcctccagaagtcctacatgtccatgtggatggatgcattgttggttccatcgcttctgctaagattgaagaagtagtaaatcatcttagaagtttaaaattgcttccacattcagggattccagaggatttggaagtgggttatgtacccttaagccatggtggggcttatcctggactataccttttcaccaatccagctagatttcttcgtccggtcagaagtctcttaggtctatccaatggagggccaaatattgagctgattggaccatttgaacaggcattcatggaaatacgatgccctgatggtggggatggtggaagaaacaaattatttcctgcaactcatgaagaaatccaccctacagccattcttagtgtagttgcaaatttgacaccttggtctgatcacaatcaaagtcctcggaacatgtaccaatgtcagatggcaaagcaaaccatgggattctgtggccaagctctaaaattccgtactgatgtaaaagcatttcatctacagacccctcagacaccaattgtccggacagctacatatagcaagtattgcatggatgagttcccatccggaacaaatgctattgttgcggtgctatcatacacagggtatgatatggaggatgccatgattttgaataaatccgctgttgatcgtgggatgttccgtgggcatattttccagtttcttttatcctttgtactctttctgcagactgagtgcattgatttatcagcaaaaagtagagataatgttacggagttcttttgcaagagtaatctttcgagggacactaccgctgcaatcgaatcagatggccttcctcggattggagagaacatatttccaaatgagcagtactacagcgtctgtaacaatctcactggtacagtaaggcctatcaaactgaagggctcagaacctgcagctattgattatgttgctgtcaatgggacaaattttaaggatcgtctacaaaaggctaatattcgtctgcgtcgcgtgagaaatcctataattggtgacaagttcagcagcagacatggtcaaaagggagtttgttcgcagttgtggcctgatattgatatgccattctctgctaatactgggatgaggccagatctcatcattaatccccatgcatttccttcacgaatgactatagcaatgctcttagagtcgatagcagcaaaggccggaagtctgaaagggaagttcattgatgcaacgccttttgcaagctcagttaaagagagatcaaattccattgtggatgaactgggacccatgcttgcttcttatggatttaattaccatggaacagaaattctatatagtggagtttttggcactgagatgaaatgtgagattttccttggacctgtatactatcaacgccttcgtcatatggtctcagacaaatttcaggttcgtaccacagggcgaatagatcagatcacaagacagccaataggaggaaggaaatacggtggagggattcggttcggtgagatggagcgagacgcgcttctcgctcatggtgcctcttacctcctacatgacaggctccattcctgctccgactaccatatcgcggacgtgtgctccatctgcgggagcttgctgacggcgacggtgatcaaatccgaaagccagaagaaagccaagcgcgacatgctcgggctccccaccgtaaaacctcccaagaactttgcctgccaggcctgcaaaacaagcaaagggatggagaccgtcgccatgccttacgtcttcagatacctggcctccgagttggcggccatgaacataaagttggagcttcggctcagcaatagaacagagcatcctactactaccagcgaagaatcctga
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| Protein seq | MAAGKSSSASKEDQYAALRELYRPHIDSFDYFIDEGLDKMLQSIRPVEITVPNSPTTLRNILPAFFFFYLLLVAYSSVDQFFCRQARTTYHGEFKVDTFIQCNDGPAVRQTFNFGYLPIMLMSKLCHLRGADSEKLIFHGEEATEMGGYFICGGMERLVRILILQKRNYPMGLIRGSFVNRGAGYTDKAVIIRCVQDDQSSVTIKLYYLLNGSARLGFWLGGREFLLPVGIVLKALIDTSDREIFTSLTCCYSDHYERGKGVVSTQLIGERAQIILDEVRDLSLFTRTECLLHLGKYFRSVMEGFEKDDFETVAEAVLKDYIFVHLQNNHDKFNLLIFMLQKLYAIVDQTASPDKADALQYQEVLLPGHLITVFLKDRLQDWLRKSKRLIVEEATKNKSFDLNDSQEVRKFLSKTSAYVGKAIQSMIKVGKVNSQSGLDLPQRDGMTIHAERLNFHRYISHFRSVHRGSSFAKMRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRISSFYNSEGATKDFQKIKMSLIARLVGAGMAQLLPRIERTGPPEVLHVHVDGCIVGSIASAKIEEVVNHLRSLKLLPHSGIPEDLEVGYVPLSHGGAYPGLYLFTNPARFLRPVRSLLGLSNGGPNIELIGPFEQAFMEIRCPDGGDGGRNKLFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQALKFRTDVKAFHLQTPQTPIVRTATYSKYCMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGHIFQFLLSFVLFLQTECIDLSAKSRDNVTEFFCKSNLSRDTTAAIESDGLPRIGENIFPNEQYYSVCNNLTGTVRPIKLKGSEPAAIDYVAVNGTNFKDRLQKANIRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKAGSLKGKFIDATPFASSVKERSNSIVDELGPMLASYGFNYHGTEILYSGVFGTEMKCEIFLGPVYYQRLRHMVSDKFQVRTTGRIDQITRQPIGGRKYGGGIRFGEMERDALLAHGASYLLHDRLHSCSDYHIADVCSICGSLLTATVIKSESQKKAKRDMLGLPTVKPPKNFACQACKTSKGMETVAMPYVFRYLASELAAMNIKLELRLSNRTEHPTTTSEES |
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| Function | DNA-directed RNA polymerase I subunit 2 [UniProtKB/Swiss-Prot:F4I366] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_10g0015860 | OsNaBo_10g0015860.01 | Chr10 | 20705541 | 20717249 | - | NAM | ||
| CDS seq | atggcggccggGaagagctcgtcggcctccaaggaggaccagtacgcggcgctgcgggagctgtaccggccgcacatcgactcgttcgactacttcatcgacgaggggctcgacaagatgcttcagtccatccgccccgtggagatcaccgtccccaactcccccaccaccctcagaaatatccttcctgcttttttttttttttaccttttgctcgtcgcttacagttcagtggaccagtttttttgcaggcaggcacggacgacgtatcatggggaatttaaagtggatactttcatccaatgtaatgacggaccagctgtcaggcaaaccttcaattttggttacttgcctattatgttaatgtcaaagctttgccatctaagaggtgcagattctgaaaaAttgattttccatggtgaagaggcaacagaaatgggcgggtacttcatatgtggtgggatggagagacttgtacggattcttattttacaaaaacgtaactatcctatgggcctgatccgtggctctttcgttaatcgtggtgctgggtacactgacaaagcagtgatcataagatgtgtccaagatgatcagtccagtgtgacaataaagctgtattacctcctaaatggcagtgcaaggcttgggttctggttgggaggcagagaatttctccttcctgttgggattgttctcaaggccctaattgatactagtgaccgggaaatatttacaagcttgacatgctgctacagtgatcattatgaaagaggaaagggagttgtcagcactcaacttattggtgaaagggcacaaataattcttgacgaagtcagagacctgtctctttttactcgcacagaatgcttgttgcatcttggaaagtacttccgatctgtgatggaaggatttgagaaagatgattttgaaactgttgctgaggcagttcttaaggactatatttttgttcacctgcaaaacaaccatgacaaatttaatttattgatatttatgctacagaaactttatgcgattgtagatcaaactgcgtcacctgataaagctgatgctctacagtaccaggaagttctcttgcctggccacctgataacagtttttctaaaggatagacttcaagattggttgagaaagtccaaacggttaattgttgaagaggctacaaaaaAtaaaagctttgatctcaatgactcacaggaggtcaggaaatttctcagtaaaacttcagcatatgttggcaaagctattcagagtatgataaaggtcggaaaagtaaattcacaatcagggctagatctgccacagcgagatgggatgaccattcatgctgaacggctcaactttcatcgttatatttcgcatttccggtctgtgcataggggttctagttttgctaaaatgcgtacgacatctgtgaggaagttgcttccagagtcatggggtttcctctgtcctgttcatacacctgatggagagccttgtggtttactgaaccatatgacttccacatgccgtatttcatccttttacaactcagaaggggcaactaaagattttcagaaaataaagatgtcacttattgctcgtttggttggcgctggaatggcccaactgttgccgaggatagagcgaactggtcctccagaagtcctacatgtccatgtggatggatgcattgttggttccatcgcttctgctaagattgaagaagtagtaaatcatcttagaagtttaaaattgcttccacattcagggattccagaggatttggaagtgggttatgtacccttaagccatggtggggcttatcctggactataccttttcaccaatccagctagatttcttcgtccggtcagaagtctcttaggtctatccaatggagggccaaatattgagctgattggaccatttgaacaggcattcatggaaatacgatgccctgatggtggggatggtggaagaaacaaattatttcctgcaactcatgaagaaatccaccctacagccattcttagtgtagttgcaaatttgacaccttggtctgatcacaatcaaagtcctcggaacatgtaccaatgtcagatggcaaagcaaaccatgggattctgtggccaagctctaaaattccgtactgatgtaaaagcatttcatctacagacccctcagacaccaattgtccggacagctacatatagcaagtattgcatggatgagttcccatccggaacaaatgctattgttgcggtgctatcatacacagggtatgatatggaggatgccatgattttgaataaatccgctgttgatcgtgggatgttccgtgggcatattttccagtttcttttatcctttgtactctttctgcagactgagtgcattgatttatcagcaaaaagtagagataatgttacggagttcttttgcaagagtaatctttcgagggacactaccgctgcaatcgaatcagatggccttcctcggattggagagaacatatttccaaatgagcagtactacagcgtctgtaacaatctcactggtacagtaaggcctatcaaactgaagggctcagaacctgcagctattgattatgttgctgtcaatgggacaaattttaaggatcgtctacaaaaggctaatattcgtctgcgtcgcgtgagaaatcctataattggtgacaagttcagcagcagacatggtcaaaagggagtttgttcgcagttgtggcctgatattgatatgccattctctgctaatactgggatgaggccagatctcatcattaatccccatgcatttccttcacgaatgactatagcaatgctcttagagtcgatagcagcaaaggccggaagtctgaaagggaagttcattgatgcaacgccttttgcaagctcagttaaagagagatcaaattccattgtggatgaactgggacccatgcttgcttcttatggatttaattaccatggaacagaaattctatatagtggagtttttggcactgagatgaaatgtgagattttccttggacctgtatactatcaacgccttcgtcatatggtctcagacaaatttcaggttcgtaccacagggcgaatagatcagatcacaagacagccaataggaggaaggaaatacggtggagggattcggttcggtgagatggagcgagacgcgcttctcgctcatggtgcctcttacctcctacatgacaggctccattcctgctccgactaccatatcgcggacgtgtgctccatctgcgggagcttgctgacggcgacggtgatcaaatccgaaagccagaagaaagccaagcgcgacatgctcgggctccccaccgtaaaacctcccaagaactttgcctgccaggcctgcaaaacaagcaaagggatggagaccgtcgccatgccttacgtcttcagatacctggcctccgagttggcggccatgaacataaagttggagcttcggctcagcaatagaacagagcatcctactactaccagcgaagaatcctga
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| Protein seq | MAAGKSSSASKEDQYAALRELYRPHIDSFDYFIDEGLDKMLQSIRPVEITVPNSPTTLRNILPAFFFFYLLLVAYSSVDQFFCRQARTTYHGEFKVDTFIQCNDGPAVRQTFNFGYLPIMLMSKLCHLRGADSEKLIFHGEEATEMGGYFICGGMERLVRILILQKRNYPMGLIRGSFVNRGAGYTDKAVIIRCVQDDQSSVTIKLYYLLNGSARLGFWLGGREFLLPVGIVLKALIDTSDREIFTSLTCCYSDHYERGKGVVSTQLIGERAQIILDEVRDLSLFTRTECLLHLGKYFRSVMEGFEKDDFETVAEAVLKDYIFVHLQNNHDKFNLLIFMLQKLYAIVDQTASPDKADALQYQEVLLPGHLITVFLKDRLQDWLRKSKRLIVEEATKNKSFDLNDSQEVRKFLSKTSAYVGKAIQSMIKVGKVNSQSGLDLPQRDGMTIHAERLNFHRYISHFRSVHRGSSFAKMRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRISSFYNSEGATKDFQKIKMSLIARLVGAGMAQLLPRIERTGPPEVLHVHVDGCIVGSIASAKIEEVVNHLRSLKLLPHSGIPEDLEVGYVPLSHGGAYPGLYLFTNPARFLRPVRSLLGLSNGGPNIELIGPFEQAFMEIRCPDGGDGGRNKLFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQALKFRTDVKAFHLQTPQTPIVRTATYSKYCMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGHIFQFLLSFVLFLQTECIDLSAKSRDNVTEFFCKSNLSRDTTAAIESDGLPRIGENIFPNEQYYSVCNNLTGTVRPIKLKGSEPAAIDYVAVNGTNFKDRLQKANIRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKAGSLKGKFIDATPFASSVKERSNSIVDELGPMLASYGFNYHGTEILYSGVFGTEMKCEIFLGPVYYQRLRHMVSDKFQVRTTGRIDQITRQPIGGRKYGGGIRFGEMERDALLAHGASYLLHDRLHSCSDYHIADVCSICGSLLTATVIKSESQKKAKRDMLGLPTVKPPKNFACQACKTSKGMETVAMPYVFRYLASELAAMNIKLELRLSNRTEHPTTTSEES
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_10g0015860 | OsNaBo_10g0015860.02 | Chr10 | 20705541 | 20717249 | - | NAM | ||
| CDS seq | atggcggccggGaagagctcgtcggcctccaaggaggaccagtacgcggcgctgcgggagctgtaccggccgcacatcgactcgttcgactacttcatcgacgaggggctcgacaagatgcttcagtccatccgccccgtggagatcaccgtccccaactcccccaccaccctcagaaatatccttcctgcttttttttttttttaccttttgctcgtcgcttacagttcagtggaccagtttttttgcaggcaggcacggacgacgtatcatggggaatttaaagtggatactttcatccaatgtaatgacggaccagctgtcaggcaaaccttcaattttggttacttgcctattatgttaatgtcaaagctttgccatctaagaggtgcagattctgaaaaAttgattttccatggtgaagaggcaacagaaatgggcgggtacttcatatgtggtgggatggagagacttgtacggattcttattttacaaaaacgtaactatcctatgggcctgatccgtggctctttcgttaatcgtggtgctgggtacactgacaaagcagtgatcataagatgtgtccaagatgatcagtccagtgtgacaataaagctgtattacctcctaaatggcagtgcaaggcttgggttctggttgggaggcagagaatttctccttcctgttgggattgttctcaaggccctaattgatactagtgaccgggaaatatttacaagcttgacatgctgctacagtgatcattatgaaagaggaaagggagttgtcagcactcaacttattggtgaaagggcacaaataattcttgacgaagtcagagacctgtctctttttactcgcacagaatgcttgttgcatcttggaaagtacttccgatctgtgatggaaggatttgagaaagatgattttgaaactgttgctgaggcagttcttaaggactatatttttgttcacctgcaaaacaaccatgacaaatttaatttattgatatttatgctacagaaactttatgcgattgtagatcaaactgcgtcacctgataaagctgatgctctacagtaccaggaagttctcttgcctggccacctgataacagtttttctaaaggatagacttcaagattggttgagaaagtccaaacggttaattgttgaagaggctacaaaaaAtaaaagctttgatctcaatgactcacaggaggtcaggaaatttctcagtaaaacttcagcatatgttggcaaagctattcagagtatgataaaggtcggaaaagtaaattcacaatcagggctagatctgccacagcgagatgggatgaccattcatgctgaacggctcaactttcatcgttatatttcgcatttccggtctgtgcataggggttctagttttgctaaaatgcgtacgacatctgtgaggaagttgcttccagagtcatggggtttcctctgtcctgttcatacacctgatggagagccttgtggtttactgaaccatatgacttccacatgccgtatttcatccttttacaactcagaaggggcaactaaagattttcagaaaataaagatgtcacttattgctcgtttggttggcgctggaatggcccaactgttgccgaggatagagcgaactggtcctccagaagtcctacatgtccatgtggatggatgcattgttggttccatcgcttctgctaagattgaagaagtagtaaatcatcttagaagtttaaaattgcttccacattcagggattccagaggatttggaagtgggttatgtacccttaagccatggtggggcttatcctggactataccttttcaccaatccagctagatttcttcgtccggtcagaagtctcttaggtctatccaatggagggccaaatattgagctgattggaccatttgaacaggcattcatggaaatacgatgccctgatggtggggatggtggaagaaacaaattatttcctgcaactcatgaagaaatccaccctacagccattcttagtgtagttgcaaatttgacaccttggtctgatcacaatcaaagtcctcggaacatgtaccaatgtcagatggcaaagcaaaccatgggattctgtggccaagctctaaaattccgtactgatgtaaaagcatttcatctacagacccctcagacaccaattgtccggacagctacatatagcaagtattgcatggatgagttcccatccggaacaaatgctattgttgcggtgctatcatacacagggtatgatatggaggatgccatgattttgaataaatccgctgttgatcgtgggatgttccgtgggcatattttccagactgagtgcattgatttatcagcaaaaagtagagataatgttacggagttcttttgcaagagtaatctttcgagggacactaccgctgcaatcgaatcagatggccttcctcggattggagagaacatatttccaaatgagcagtactacagcgtctgtaacaatctcactggtacagtaaggcctatcaaactgaagggctcagaacctgcagctattgattatgttgctgtcaatgggacaaattttaaggatcgtctacaaaaggctaatattcgtctgcgtcgcgtgagaaatcctataattggtgacaagttcagcagcagacatggtcaaaagggagtttgttcgcagttgtggcctgatattgatatgccattctctgctaatactgggatgaggccagatctcatcattaatccccatgcatttccttcacgaatgactatagcaatgctcttagagtcgatagcagcaaaggccggaagtctgaaagggaagttcattgatgcaacgccttttgcaagctcagttaaagagagatcaaattccattgtggatgaactgggacccatgcttgcttcttatggatttaattaccatggaacagaaattctatatagtggagtttttggcactgagatgaaatgtgagattttccttggacctgtatactatcaacgccttcgtcatatggtctcagacaaatttcaggttcgtaccacagggcgaatagatcagatcacaagacagccaataggaggaaggaaatacggtggagggattcggttcggtgagatggagcgagacgcgcttctcgctcatggtgcctcttacctcctacatgacaggctccattcctgctccgactaccatatcgcggacgtgtgctccatctgcgggagcttgctgacggcgacggtgatcaaatccgaaagccagaagaaagccaagcgcgacatgctcgggctccccaccgtaaaacctcccaagaactttgcctgccaggcctgcaaaacaagcaaagggatggagaccgtcgccatgccttacgtcttcagatacctggcctccgagttggcggccatgaacataaagttggagcttcggctcagcaatagaacagagcatcctactactaccagcgaagaatcctga
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| Protein seq | MAAGKSSSASKEDQYAALRELYRPHIDSFDYFIDEGLDKMLQSIRPVEITVPNSPTTLRNILPAFFFFYLLLVAYSSVDQFFCRQARTTYHGEFKVDTFIQCNDGPAVRQTFNFGYLPIMLMSKLCHLRGADSEKLIFHGEEATEMGGYFICGGMERLVRILILQKRNYPMGLIRGSFVNRGAGYTDKAVIIRCVQDDQSSVTIKLYYLLNGSARLGFWLGGREFLLPVGIVLKALIDTSDREIFTSLTCCYSDHYERGKGVVSTQLIGERAQIILDEVRDLSLFTRTECLLHLGKYFRSVMEGFEKDDFETVAEAVLKDYIFVHLQNNHDKFNLLIFMLQKLYAIVDQTASPDKADALQYQEVLLPGHLITVFLKDRLQDWLRKSKRLIVEEATKNKSFDLNDSQEVRKFLSKTSAYVGKAIQSMIKVGKVNSQSGLDLPQRDGMTIHAERLNFHRYISHFRSVHRGSSFAKMRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRISSFYNSEGATKDFQKIKMSLIARLVGAGMAQLLPRIERTGPPEVLHVHVDGCIVGSIASAKIEEVVNHLRSLKLLPHSGIPEDLEVGYVPLSHGGAYPGLYLFTNPARFLRPVRSLLGLSNGGPNIELIGPFEQAFMEIRCPDGGDGGRNKLFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFCGQALKFRTDVKAFHLQTPQTPIVRTATYSKYCMDEFPSGTNAIVAVLSYTGYDMEDAMILNKSAVDRGMFRGHIFQTECIDLSAKSRDNVTEFFCKSNLSRDTTAAIESDGLPRIGENIFPNEQYYSVCNNLTGTVRPIKLKGSEPAAIDYVAVNGTNFKDRLQKANIRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKAGSLKGKFIDATPFASSVKERSNSIVDELGPMLASYGFNYHGTEILYSGVFGTEMKCEIFLGPVYYQRLRHMVSDKFQVRTTGRIDQITRQPIGGRKYGGGIRFGEMERDALLAHGASYLLHDRLHSCSDYHIADVCSICGSLLTATVIKSESQKKAKRDMLGLPTVKPPKNFACQACKTSKGMETVAMPYVFRYLASELAAMNIKLELRLSNRTEHPTTTSEES
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr10 | 20707722 | 20708346 | - | OsNaBo_10g0015860.01 | OsNaBo_10g0015860.02,OsNaBo_10g0015860.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.596596 | 5.160211 | 2.852861 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0495600 | RBH | 2.519560 | 3.698347 | 1.042338 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g35290 | RBH | 1.866557 | 2.758465 | 0.294071 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0495600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0015940 | RBH | 0.965142 | 2.986560 | 3.351516 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0016180 | RBH | 0.067201 | 2.913599 | 1.987386 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0015570 | RBH | 2.255954 | 2.945503 | 10.800733 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0016070 | RBH | 0.244882 | 0.094573 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0015900 | RBH | 5.500318 | 13.066298 | 10.930323 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0313000 | RBH | 4.9548955 | 12.3800915 | 4.2865275 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0015810 | RBH | 0.339492 | 0.416792 | 1.297991 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0335300 | RBH | 5.446248 | 20.1591045 | 19.9391985 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0015570 | RBH | 0.295505 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0015450 | RBH | 0.780239 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0015950 | RBH | 1.647654 | 14.753511 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0015700 | RBH | 0.267102 | 0.0 | 0.155318 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0016110 | RBH | 0.108964 | 3.400611 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G015720 | RBH | 1.285790 | 4.953656 | 2.352046 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
