Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_06G015380 | OGI:04043860 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr06:15723022-15729503 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCATATAAATGGGGTAAATGGTGATTCTGATGTCTCATAGAAATTGTTTGTTACGTCAGAATCAGAAGAAACTAATTCTGTATGGAGAAACAAAATATCTCTCATTTCCGACGCAAATAGTTTTTTTTTTGGAATTTCGAAATAAAGGTTCTTGTCTTGTGGGTAACGGTGCACAAATTTTTGGAATCCGGTACCAACAGGTATAATCCCCCCCAGAACTACGTTTTCTTTCAGGCCTTTCAACCAATCAATACGACCTCGTAAGGCAGCTTTTGCTAAAACTCGAGCAGTTTCTTGAAAACTTGCTTCAGATATGAAACTTTGGGTATTCAGGGAAACCCTTGTTATTCCCAATAAGATTGCCCGATAATAGATCGATTCATCCAAAGCCCGCCCTGCTCGCTCTGCTCGCAATAGTCCAATTAATTCCCCAGGTGAAAAAACATTAGACATTCCATCTTCGGAAACCCGCACTTTTGATGTTACTTGGCGTATAATAATCTCTATATGTCTATTATGGATCTGTACCCCTTGGGATCGATAAACCTTTTGGATCTTATTAACCAAAGAGATACGACTTTGGGCTATGGTTAACTCAGCTCCAATCAAGAATCCCCAAGGACCCCCAAGAATTCTTGGTATACGCTCATTCCAATCCTCAATTCTCCTTTCGAGATTCGGCGATAGTGAATCAATTGAACGCGCTTCGAAGATTTGTTCTACTTTTGGAAGACCTTGCGTTATGTCACTAGATCTCGCTTTTTCGTATATAAACGTAACTAACCTATCCCCTTTGTAAAGGATTTCTCCATAATGACCATGAACAGTTGCTCCTGTAGTGGCCAAATAAGGCTTAGCTGCTCTTATAACAAAGGAATCTATATTTACAATGAAAATTTGACCTGATTTTTTTATGTGCGATTTAAATAGACATACATTTTCGCAAATAAATTGTCCAAGGTGAATTTTTGCTGATGTCTCTTCCCAAGAATCATGAGGGAGAAAGTGCCAATTTAACTGGAATGGATCCAACATGATGTTACTATCGAAATTTGAAGTCCTTTGATTTTCATTTATTAAAGAGTGTTTAAGTCCTTGAAGTACTTTGAAGTTTTGTTTCAAATTGTCAAGGAGCAAATGCTTTTTTAACAGGATCTGATTATACGTTAGTAAATAGTAAGATGAAGAAAAATTCGATATACTAGGTGCAATAGTACCTAAGAGTCCCGAAAAATTTCGAAAGAGCCCCAAAAATTTTGGAATAGGAATTCTAGGATTCGATTCTTTTACCCCATTGGGATTTTTTGAATTCTTAAAAAAACCAATTCGAGAACAGTTGGATGCCGACAAAACCATCAAAGATTGGTATTCTTTATTTCGATTCAACAAGGTACCAATAGCTTCTTGATGTTGGCTAAGTGATTGAATCTTCGCCTTGGAATAAAAGGAATTGGTATTGGTGCGATCTAACCTATTATGGAGAATCAGTCCTGCACTTCTGCTATCATACCTTTTTCGTGTATACGAAATAGTGGATTTGATTAACCCAATTCTTAGGAAATCGCGAATCAGACCATTTGCTCTTATCTCAACAAGGGAAGCGCGAGCCTCCTCTTTTTCTTCTTGTTCCCAATTCAATACTAAGCAAGTTCGAACGAATTGACTATTCGTATGATAAATTCTTTGAGTTAACTTGCTATTTTCATGAGAAATAAAATTGACAAGTCGAAGTTGGAGATTACCCTCTTCCTGCAAGAGATCCTGTGGGAAAAGTGTTGCTAAATTTCTCCCTTCGTTCATTTCATACGCGACTGCAGGTCGAACCAAAACAAAATACTTTTCCTTGCTCTTGAGAATTTTTTTCCACTGAACATAGACCCAATTTTCCCTTTTTTTTGATTCCTTCGAATCTTTTTTTTCTCTTTCTAGTGGTATCAAACTGCCACCTAATATCTTATCCGCCTCTTCAGGAAAATGAATATCTCCAGAAAAGATTTTTAGTTCCGTATGGCTTTTTTTTCTCTTCACTCGAACCAATCCACCCAGCCGACTTCTTGTATTTTTTGTGAGTTGTGTATCCACTCCAATAATACTATTGTCAAGTACCTTTAGGGATGAGGATCTCGGCAAGATATGCAGTTCTTGGAGAATGAAAAAAAACCGATCTACTTCTTTTTGGTATTTTAGACTAAATTCTTTTGTTCCTCGATGCTTAATCAAAACCCCCTTTTTTAAGACGGAATCTTCCTCCGGGTTCCCATATTCGTCCTCTGAGTCTTTCTCTGAGTCTTCCTCTAAAGTCCCATGTTCGTCCTCTGAGTCTTCCTCTAAAGTGCCATATTTATCCTCTCGGGGCCTATATTTGTTCTCTGGACTCCCATATTCGTCCTCGGATTCCTCCTCTCGAGTCCTATATTCGTCCTCTAGGATTCCATATTCATCTTCTAGGGTTTCATATTCGTTCTCTGGGATCCCATATTCATCTTCTAGGGTTTCATACTCCTCCTCTCGAGTCCTATATTCGTCTTCTAGGGTTTTACATTCTTCCTCTCGGGTCCTATATTCGTTTTCTGGGCTCCCGTATTCGTTCTCTGAGTCTTTCTCTCGAGTCCTATATTCGTCCTCTAGGGTCCTATATCTAAATTTAACAATTCCTGAACCCTTTTTATCTTTTTTGTATCGTGGGTCGTCAAAATAAGCAACTATAGTATTTCTACGTAAAACACCCATAAAGGGTATTTCAATCGAAATCCCAAAACAGGATATTGGTTCTTTCTCTTGTTCTTGATGATACTGTAATGGAATGGCGAACCTATTTCTTCGCTTTTTCGCTAACAAATCAAAATTATTTTGAAGAATAGAAGGATAGACAAAATTCCAATGACCATTGGACATGATTCGATCCGGCGTTGAATAATCAAGAATTTCCCTATCTTTTTTACCAAAAGTATCCAACAGTCTATGTCTTACCTCATCATCAGCCATCGAGAGGCCAAAGATATACCTTCCGTCAACAGAAAAGGAATAAGTATTCATTTGATCTTGATCCTTGTGGAGCGAAAAAGAAGCTATACTAGATCTGCACATACTTACTGACAATATCCATAAATGGCTTGTTTTTGGTAATCGACGAAGATTACCATATTGATATTCGGGCGCATGATAAACATCGGTACTCCAGTGCATTTCCCCATCTGATTCGGAATAAATATGTTTTTGTACCTTTTCTTTAAAATGCAAAGCGGACGTTCCGGCACGAATCTCCGCAATTACTTGTTCGGATTCTACATATTGATCATTTTGCACTAGAATCAAGCTTTTTGAAGGAATAGTCACACTATGTAGAATATCCTGACTCTGAATAGTTATATGCAAGTCTATATAACATAGAAAAGCAGGCTGCCCATGACGGGTACGTGTGGGGTGAACCAAATCCCCATTGAATTGGATTTTTCCATTTGAAGGGGATCGTACAAGGTCGGCAGTACCCCCTGTGAATACCCCACCAGTATGAAAAGTTCTTAATGTTAGTTGAGTCCCTGGCTCCCCAATAGATTGACCCGCAATAACACCTACAGCTTCCCCCAATTCGACCAGATCGCCATGAGTGGAACTCCGACCATAACATAATTGACAGATCCAAGATGTGCTCCGGCAAGTAAAGGGGGTTCTAATATATATTGGTTGTGCTCGAAATGGCTGTGCTCGAAAGGTGGTTATGAATCGATTGACTAACCCAATTCCAATATCTTGATTTCGAGTGGCAATGCACCGTGAACCGATATATATATCGTTTGCTAATACACGACCAATTAATGTTTGTACAAAAAGTTTTTCCGTCATCCCAGTTTGAGGACTCACAGAAATAGCTTGGATAGTACCACAATCTCTTCTACGCACAATAATATGTTGAACTACTTCAACAAGTCTACGTGTAAGATATCCAGCATCCGCCGTTCGTACAGCAGTATCTACAACCCCTTTGCGGGCTCCGTAGCAGGAAATTATATATTCTGTCAAAGAAAGTCCCTCGCGTAAATTGCTTTGAATAGGTAAATCAATCATTTGTCCTTGAGGATCCGCCATTAATCCTCGCATACCTACTAATTGGTGTACCTGCGATGCATTTCCTCTAGCTCCTGAAAAAGACATTAGATAGACTGGATTAGAAGGATCTGTTATCCGAAAATTCGAATTCATTTCGTGTTTCAAATATTCACTTGTAGCATACCAGATTTCAACGGATTGGCGTAATTTTTCTACCGCGTGTACAGCCCCATAATAATAGTGTTTTTCCAAAAGAAAACTCTGTTGTTCCGCATCTTGGACTAACCATCCCTTAGAGGGTATTGTTAAAAGATCCTCGATTCCTAATGAAATCGATGTAGTAGTGGCTTGATGGAAGCCCAGCGTTTTTATTTGATCCAGTATATGGGATGTATATCCCATTCCGAAATGATCTATTAATCTGCTAATAAGTCGTTTCATAGCAGTTCCATCTATCTCTTTATTCTGAAAGACCAGATTGGCCCGTTCCGCCATAAATAAGTACCCCCTTTTTCGGCTGAGTATAATTCGACAATTGCTGAGTAGGATTCGACAATGGGCCTGAGTCAGTGATTCGAAAACTTAGTTAACTTCCTTTCCTCAATCTCAATCTGGATTCGTGCGGCAAAAATGATGATACTAGCGAAATCGGAATGCCCCTCGAAAGGGGCATCCCCGAATCTAACTTCCTTGTTTAGATAGTGTATGAATAGGCCTGACTAAATCCTTGTATGGCTTCCTCTATTTCTCTATAAAAAGAAATATGACCAAGAGTGGTGCGAATGTATATAGAACGGATTTCCTTTTTTCTATTTCCCACTACTAGATAGTGGGCAAAAATCTCACGATAAGTCCCCAAAGATTCATATTGAACTTCAATCGGAACTTCTCTTAACCCAATGACGCGTTGATCTAGTTTCCATCGGAGCCACAAGGGACTGTCTAAACAGATTTGTTTCTGTCTATAAGCTCCCAGTGCATCATAGGAACTAGAAAAAAGAGATTCTTTATCTTTCGTATACTTAGGATTATTATTATTGTAATTTACTTTTTGGTTTGGATAGTTTCCGCAACTATTATATCTATTTGCACAAATACCTCGACGGTTTCCAATCGTTAATACATAAAGTCCGATAAGAATGTCTTGGGTTGGTACGCAAATAGGATCCCCAATAGCGGGAGATAGGAGATTCATATGAGAAAACATAAGTAAACGAGCTTCCGCCTGAGCTTCCAAGGATAAAGGTAGATGAACAGCCATTTGATCCCCATCAAAGTCTGCATTGAAACCTTTACACACTAATGGGTGTAAACAAATAGTACGCCCCTCTACTAAAGTGGGTTGGAAAGCCTGTATGCCTAATCTATGCAGGGTAGGTGCTCTATTCAACAGTACAGGATGTCCCCTCATAACTTCTTGAAGTATTTCCCATACAATGGGTTCCTTTTCCCAAATTTTCCTTTTAGCAATCCTAACATTAGAAGTAGCACGTTTCGTGATTAAATCGCGAATTACAAATAGCTGAAAAAGCTTTATTGCTATCTCTAGAGGTAACCCACATTGATGTAATGAAAGTGAAGGACCCACAACAATGACAGAACGCCCCGAGTAATCGACCCGTTTCCCAAGCAGAGTTTCGCGAAACCTCCCCTCTTTACCTTCAATTACATCTGAAAGTGATTTGTATACTTTATTGTGACCATCCCTCGTTGGTTGCCCGCGGGACCCACTATCAAGAAGTGTATCCACGGCTTCTTGTACCAATTTTTCCTGGCACATTACTAAATCTGCTGGCGCTAATTCACTTCTTTTTAATAGATAGGCAAGATTGTTGTTCCGACGGATAACTCTCTTATAAAGTTCATTAATATCCGAAGTCACTACTTTATCCCCAGACCTATAAACAATGGGTCTTAATTCGGGAGGAAGAACTGGTAATAAGCACAAAACCATCCATTCTGGTTCTACATTTGTTTGAATAAAATGTTTCGCCAATTGCATGCGTCTAATCAAAAAAACTTTTCTTATTCGTCTTTTTCTATCTTCCCATTCATCTCCACTATACCCCTCGTCTTCTAATTCCTTCCATTCGACCGAGGAATTCTCTAAAATAATTCGCAAATCCAAATCTGCTAATTGTTCTCTAATAGCACCTGCTCCTGTCGCAATTTCCCGATTTCGAAATGTTGTAAAGCCTGGGGTAGAAAAAAAAGGGGGAAATGCTATGGTTACAGGATGAAATTTCATCCTCGAATAAACCTCGTAATCGTAAGAAAGTTGGTTTTTTAGCACTGGGCCTAGCAAAAGAGAAATCGCCATATACTAGGCCCTCCAATTTCTTAAGGGGTTTATCTAAAAGATTCGCGATATAACTAGGAAGACCTTTTAAATACCACACATGAGTCACGGGACATGCGAGTTTGATGTATCCCAT
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| CDS seq | ATGGGATACATCAAACTCGCATGTCCCGTGACTCATGTGTGGTATTTAAAAGGTCTTCCTAGTTATATCGCGAATCTTTTAGATAAACCCCTTAAGAAATTGGAGGGCCTAGTATATGGCGATTTCTCTTTTGCTAGGCCCAGTGCTAAAAAACCAACTTTCTTACGATTACGAGGCTTTACAACATTTCGAAATCGGGAAATTGCGACAGGAGCAGGTGCTATTAGAGAACAATTAGCAGATTTGGATTTGCGAATTATTTTAGAGAATTCCTCGGTCGAATGGAAGGAATTAGAAGACGAGGGGTATAGTGGAGATGAATGGGAAGATAGAAAAAGACGAATAAGAAAAGTTTTTTTGATTAGACGCATGCAATTGGCGAAACATTTTATTCAAACAAATGTAGAACCAGAATGGATGGTTTTGTGCTTATTACCAGTTCTTCCTCCCGAATTAAGACCCATTGTTTATAGGTCTGGGGATAAAGTAGTGACTTCGGATATTAATGAACTTTATAAGAGAGTTATCCGTCGGAACAACAATCTTGCCTATCTATTAAAAAGAAGTGAATTAGCGCCAGCAGATTTAGTAATGTGCCAGGAAAAATTGGTACAAGAAGCCGTGGATACACTTCTTGATAGTGGGTCCCGCGGGCAACCAACGAGGGATGGTCACAATAAAGTATACAAATCACTTTCAGATGTAATTGAAGACTTTGATGGGGATCAAATGGCTGTTCATCTACCTTTATCCTTGGAAGCTCAGGCGGAAGCTCGTTTACTTATGTTTTCTCATATGAATCTCCTATCTCCCGCTATTGGGGATCCTATTTGCGTACCAACCCAAGACATTCTTATCGGACTTTATGTATTAACGATTGGAAACCGTCGAGGAGCTAGAGGAAATGCATCGCAGGTACACCAATTAGTAGGTATGCGAGGATTAATGGCGGATCCTCAAGGACAAATGATTGATTTACCTATTCAAAGCAATTTACGCGAGGGACTTTCTTTGACAGAATATATAATTTCCTGCTACGGAGCCCGCAAAGGGGTTGTAGATACTGCTGTACGAACGGCGGATGCTGGATATCTTACACGTAGACTTGTTGAAGTAGTTCAACATATTATTAGTCAGGATATTCTACATAGTGTGACTATTCCTTCAAAAAGCTTGATTCTAGTGCAAAATGATCAATATGTAGAATCCGAACAAATGGGGAAATGCACTGGAGTACCGATGTTTATCATGCGCCCGAATATCAATATGTATCATCAAGAACAAGAGAAAGAACCAATATCCTGTTTTGGGATTTCGATTGAAATACCCTTTATGGGTGTTTTACGTAGAAATACTATAGTTGCTTATTTTGACGACCCACGATACAAAAAAGATAAAAAGGGTTCAGGAATTGTTAAATTTAGATATAGGACCCTAGAGGACGAATATAGGACTCGAGAGAAAGACTCAGAGAACGAATACGGGAGCCCAGAAAACGAATATAGGACCCGAGAGGAAGAATGTAAAACCCTAGAAGACGAATATAGGACTCGAGAGGAGGAGTATGAAACCCTAGAAGATGAATATGGGATCCCAGAGAACGAATATGAAACCCTAGAAGATGAATATGGAATCCTAGAGGACGAATATAGGACTCGAGAGGAGGAATCCGAGGACGAATATGGGAGTCCAGAGAACAAATATAGGCCCCGAGAGGATAAATATGGCACTTTAGAGGAAGACTCAGAGGACGAACATGGGACTTTAGAGGAAGACTCAGAGAAAGACTCAGAGGACGAATATGGGAACCCGGAGGAAGATTCCGTCTTAAAAAAGGGGGTTTTGATTAAGCATCGAGGAACAAAAGAATTTAGTCTAAAATACCAAAAAGAAGTAGATCGGTTTTTTTTCATTCTCCAAGAACTGCATATCTTGCCGAGATCCTCATCCCTAAAGGTACTTGACAATAGTATTATTGGAGTGGATACACAACTCACAAAAAATACAAGAAGTCGGCTGGGTGGATTGGTTCGAGTGAAGAGAAAAAAAAGCCATACGGAACTAAAAATCTTTTCTGGAGATATTCATTTTCCTGAAGAGGCGGATAAGATATTAGGTGGCAGTTTGATACCACTAGAAAGAGAAAAAAAAGATTCGAAGGAATCAAAAAAAAGGGAAAATTGGGTCTATGTTCAGTGGAAAAAAATTCTCAAGAGCAAGGAAAAGTATTTTGTTTTGGTTCGACCTGCAGTCGCGTATGAAATGAACGAAGGGAGAAATTTAGCAACACTTTTCCCACAGGATCTCTTGCAGGAAGAGGCTAAGCCTTATTTGGCCACTACAGGAGCAACTGTTCATGGTCATTATGGAGAAATCCTTTACAAAGGGGATAGGTTAGTTACGTTTATATACGAAAAAGCGAGATCTAGTGACATAACGCAAGGTCTTCCAAAAGTAGAACAAATCTTCGAAGCGCGTTCAATTGATTCACTATCGCCGAATCTCGAAAGGAGAATTGAGGATTGGAATGAGCGTATACCAAGAATTCTTGGGGGTCCTTGGGGATTCTTGATTGGAGCTGAGTTAACCATAGCCCAAAGTCGTATCTCTTTGGTTAATAAGATCCAAAAGGTTTATCGATCCCAAGGGGTACAGATCCATAATAGACATATAGAGATTATTATACGCCAAGTAACATCAAAAGTGCGGGTTTCCGAAGATGGAATGTCTAATGTTTTTTCACCTGGGGAATTAATTGGACTATTGCGAGCAGAGCGAGCAGGGCGGGCTTTGGATGAATCGATCTATTATCGGGCAATCTTATTGGGAATAACAAGGGTTTCCCTGAATACCCAAAGTTTCATATCTGAAGCAAGTTTTCAAGAAACTGCTCGAGTTTTAGCAAAAGCTGCCTTACGAGGTCGTATTGATTGGTTGAAAGGCCTGAAAGAAAACGTAGTTCTGGGGGGGATTATACCTGTTGGTACCGGATTCCAAAAATTTGTGCACCGTTACCCACAAGACAAGAACCTTTATTTCGAAATTCCAAAAAAAAAACTATTTGCGTCGGAAATGAGAGATATTTTGTTTCTCCATACAGAATTAGTTTCTTCTGATTCTGACGTAACAAACAATTTCTATGAGACATCAGAATCACCATTTACCCCATTTATATGA
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| Protein seq | MGYIKLACPVTHVWYLKGLPSYIANLLDKPLKKLEGLVYGDFSFARPSAKKPTFLRLRGFTTFRNREIATGAGAIREQLADLDLRIILENSSVEWKELEDEGYSGDEWEDRKRRIRKVFLIRRMQLAKHFIQTNVEPEWMVLCLLPVLPPELRPIVYRSGDKVVTSDINELYKRVIRRNNNLAYLLKRSELAPADLVMCQEKLVQEAVDTLLDSGSRGQPTRDGHNKVYKSLSDVIEDFDGDQMAVHLPLSLEAQAEARLLMFSHMNLLSPAIGDPICVPTQDILIGLYVLTIGNRRGARGNASQVHQLVGMRGLMADPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTADAGYLTRRLVEVVQHIISQDILHSVTIPSKSLILVQNDQYVESEQMGKCTGVPMFIMRPNINMYHQEQEKEPISCFGISIEIPFMGVLRRNTIVAYFDDPRYKKDKKGSGIVKFRYRTLEDEYRTREKDSENEYGSPENEYRTREEECKTLEDEYRTREEEYETLEDEYGIPENEYETLEDEYGILEDEYRTREEESEDEYGSPENKYRPREDKYGTLEEDSEDEHGTLEEDSEKDSEDEYGNPEEDSVLKKGVLIKHRGTKEFSLKYQKEVDRFFFILQELHILPRSSSLKVLDNSIIGVDTQLTKNTRSRLGGLVRVKRKKSHTELKIFSGDIHFPEEADKILGGSLIPLEREKKDSKESKKRENWVYVQWKKILKSKEKYFVLVRPAVAYEMNEGRNLATLFPQDLLQEEAKPYLATTGATVHGHYGEILYKGDRLVTFIYEKARSSDITQGLPKVEQIFEARSIDSLSPNLERRIEDWNERIPRILGGPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIIRQVTSKVRVSEDGMSNVFSPGELIGLLRAERAGRALDESIYYRAILLGITRVSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFQKFVHRYPQDKNLYFEIPKKKLFASEMRDILFLHTELVSSDSDVTNNFYETSESPFTPFI |
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| Function | DNA-directed RNA polymerase subunit beta'' [UniProtKB/Swiss-Prot:Q6ENI2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_06G015380 | OsN22_06G015380_01 | Chr06 | 15723022 | 15729503 | - | NAM | ||
| CDS seq | ATGGGATACATCAAACTCGCATGTCCCGTGACTCATGTGTGGTATTTAAAAGGTCTTCCTAGTTATATCGCGAATCTTTTAGATAAACCCCTTAAGAAATTGGAGGGCCTAGTATATGGCGATTTCTCTTTTGCTAGGCCCAGTGCTAAAAAACCAACTTTCTTACGATTACGAGGCTTTACAACATTTCGAAATCGGGAAATTGCGACAGGAGCAGGTGCTATTAGAGAACAATTAGCAGATTTGGATTTGCGAATTATTTTAGAGAATTCCTCGGTCGAATGGAAGGAATTAGAAGACGAGGGGTATAGTGGAGATGAATGGGAAGATAGAAAAAGACGAATAAGAAAAGTTTTTTTGATTAGACGCATGCAATTGGCGAAACATTTTATTCAAACAAATGTAGAACCAGAATGGATGGTTTTGTGCTTATTACCAGTTCTTCCTCCCGAATTAAGACCCATTGTTTATAGGTCTGGGGATAAAGTAGTGACTTCGGATATTAATGAACTTTATAAGAGAGTTATCCGTCGGAACAACAATCTTGCCTATCTATTAAAAAGAAGTGAATTAGCGCCAGCAGATTTAGTAATGTGCCAGGAAAAATTGGTACAAGAAGCCGTGGATACACTTCTTGATAGTGGGTCCCGCGGGCAACCAACGAGGGATGGTCACAATAAAGTATACAAATCACTTTCAGATGTAATTGAAGACTTTGATGGGGATCAAATGGCTGTTCATCTACCTTTATCCTTGGAAGCTCAGGCGGAAGCTCGTTTACTTATGTTTTCTCATATGAATCTCCTATCTCCCGCTATTGGGGATCCTATTTGCGTACCAACCCAAGACATTCTTATCGGACTTTATGTATTAACGATTGGAAACCGTCGAGGAGCTAGAGGAAATGCATCGCAGGTACACCAATTAGTAGGTATGCGAGGATTAATGGCGGATCCTCAAGGACAAATGATTGATTTACCTATTCAAAGCAATTTACGCGAGGGACTTTCTTTGACAGAATATATAATTTCCTGCTACGGAGCCCGCAAAGGGGTTGTAGATACTGCTGTACGAACGGCGGATGCTGGATATCTTACACGTAGACTTGTTGAAGTAGTTCAACATATTATTAGTCAGGATATTCTACATAGTGTGACTATTCCTTCAAAAAGCTTGATTCTAGTGCAAAATGATCAATATGTAGAATCCGAACAAATGGGGAAATGCACTGGAGTACCGATGTTTATCATGCGCCCGAATATCAATATGTATCATCAAGAACAAGAGAAAGAACCAATATCCTGTTTTGGGATTTCGATTGAAATACCCTTTATGGGTGTTTTACGTAGAAATACTATAGTTGCTTATTTTGACGACCCACGATACAAAAAAGATAAAAAGGGTTCAGGAATTGTTAAATTTAGATATAGGACCCTAGAGGACGAATATAGGACTCGAGAGAAAGACTCAGAGAACGAATACGGGAGCCCAGAAAACGAATATAGGACCCGAGAGGAAGAATGTAAAACCCTAGAAGACGAATATAGGACTCGAGAGGAGGAGTATGAAACCCTAGAAGATGAATATGGGATCCCAGAGAACGAATATGAAACCCTAGAAGATGAATATGGAATCCTAGAGGACGAATATAGGACTCGAGAGGAGGAATCCGAGGACGAATATGGGAGTCCAGAGAACAAATATAGGCCCCGAGAGGATAAATATGGCACTTTAGAGGAAGACTCAGAGGACGAACATGGGACTTTAGAGGAAGACTCAGAGAAAGACTCAGAGGACGAATATGGGAACCCGGAGGAAGATTCCGTCTTAAAAAAGGGGGTTTTGATTAAGCATCGAGGAACAAAAGAATTTAGTCTAAAATACCAAAAAGAAGTAGATCGGTTTTTTTTCATTCTCCAAGAACTGCATATCTTGCCGAGATCCTCATCCCTAAAGGTACTTGACAATAGTATTATTGGAGTGGATACACAACTCACAAAAAATACAAGAAGTCGGCTGGGTGGATTGGTTCGAGTGAAGAGAAAAAAAAGCCATACGGAACTAAAAATCTTTTCTGGAGATATTCATTTTCCTGAAGAGGCGGATAAGATATTAGGTGGCAGTTTGATACCACTAGAAAGAGAAAAAAAAGATTCGAAGGAATCAAAAAAAAGGGAAAATTGGGTCTATGTTCAGTGGAAAAAAATTCTCAAGAGCAAGGAAAAGTATTTTGTTTTGGTTCGACCTGCAGTCGCGTATGAAATGAACGAAGGGAGAAATTTAGCAACACTTTTCCCACAGGATCTCTTGCAGGAAGAGGCTAAGCCTTATTTGGCCACTACAGGAGCAACTGTTCATGGTCATTATGGAGAAATCCTTTACAAAGGGGATAGGTTAGTTACGTTTATATACGAAAAAGCGAGATCTAGTGACATAACGCAAGGTCTTCCAAAAGTAGAACAAATCTTCGAAGCGCGTTCAATTGATTCACTATCGCCGAATCTCGAAAGGAGAATTGAGGATTGGAATGAGCGTATACCAAGAATTCTTGGGGGTCCTTGGGGATTCTTGATTGGAGCTGAGTTAACCATAGCCCAAAGTCGTATCTCTTTGGTTAATAAGATCCAAAAGGTTTATCGATCCCAAGGGGTACAGATCCATAATAGACATATAGAGATTATTATACGCCAAGTAACATCAAAAGTGCGGGTTTCCGAAGATGGAATGTCTAATGTTTTTTCACCTGGGGAATTAATTGGACTATTGCGAGCAGAGCGAGCAGGGCGGGCTTTGGATGAATCGATCTATTATCGGGCAATCTTATTGGGAATAACAAGGGTTTCCCTGAATACCCAAAGTTTCATATCTGAAGCAAGTTTTCAAGAAACTGCTCGAGTTTTAGCAAAAGCTGCCTTACGAGGTCGTATTGATTGGTTGAAAGGCCTGAAAGAAAACGTAGTTCTGGGGGGGATTATACCTGTTGGTACCGGATTCCAAAAATTTGTGCACCGTTACCCACAAGACAAGAACCTTTATTTCGAAATTCCAAAAAAAAAACTATTTGCGTCGGAAATGAGAGATATTTTGTTTCTCCATACAGAATTAGTTTCTTCTGATTCTGACGTAACAAACAATTTCTATGAGACATCAGAATCACCATTTACCCCATTTATATGA
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| Protein seq | MGYIKLACPVTHVWYLKGLPSYIANLLDKPLKKLEGLVYGDFSFARPSAKKPTFLRLRGFTTFRNREIATGAGAIREQLADLDLRIILENSSVEWKELEDEGYSGDEWEDRKRRIRKVFLIRRMQLAKHFIQTNVEPEWMVLCLLPVLPPELRPIVYRSGDKVVTSDINELYKRVIRRNNNLAYLLKRSELAPADLVMCQEKLVQEAVDTLLDSGSRGQPTRDGHNKVYKSLSDVIEDFDGDQMAVHLPLSLEAQAEARLLMFSHMNLLSPAIGDPICVPTQDILIGLYVLTIGNRRGARGNASQVHQLVGMRGLMADPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTADAGYLTRRLVEVVQHIISQDILHSVTIPSKSLILVQNDQYVESEQMGKCTGVPMFIMRPNINMYHQEQEKEPISCFGISIEIPFMGVLRRNTIVAYFDDPRYKKDKKGSGIVKFRYRTLEDEYRTREKDSENEYGSPENEYRTREEECKTLEDEYRTREEEYETLEDEYGIPENEYETLEDEYGILEDEYRTREEESEDEYGSPENKYRPREDKYGTLEEDSEDEHGTLEEDSEKDSEDEYGNPEEDSVLKKGVLIKHRGTKEFSLKYQKEVDRFFFILQELHILPRSSSLKVLDNSIIGVDTQLTKNTRSRLGGLVRVKRKKSHTELKIFSGDIHFPEEADKILGGSLIPLEREKKDSKESKKRENWVYVQWKKILKSKEKYFVLVRPAVAYEMNEGRNLATLFPQDLLQEEAKPYLATTGATVHGHYGEILYKGDRLVTFIYEKARSSDITQGLPKVEQIFEARSIDSLSPNLERRIEDWNERIPRILGGPWGFLIGAELTIAQSRISLVNKIQKVYRSQGVQIHNRHIEIIIRQVTSKVRVSEDGMSNVFSPGELIGLLRAERAGRALDESIYYRAILLGITRVSLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFQKFVHRYPQDKNLYFEIPKKKLFASEMRDILFLHTELVSSDSDVTNNFYETSESPFTPFI
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_06G015380 | OsN22_06G015380_02 | Chr06 | 15724947 | 15728914 | - | IsoSeq | ||
| CDS seq | ATCCGTCGGAACAACAATCTTGCCTATCTATTAAAAAGAAGTGAATTAGCGCCAGCAGATTTAGTAATGTGCCAGGAAAAATTGGTACAAGAAGCCGTGGATACACTTCTTGATAGTGGGTCCCGCGGGCAACCAACGAGGGATGGTCACAATAAAGTATACAAATCACTTTCAGATGTAATTGAAGGTAAAGAGGGGAGGTTTCGCGAAACTCTGCTTGGGAAACGGGTCGATTACTCGGGGCGTTCTGTCATTGTTGTGGGTCCTTCACTTTCATTACATCAATGTGGGTTACCTCTAGAGATAGCAATAAAGCTTTTTCAGCTATTTGTAATTCGCGATTTAATCACGAAACGTGCTACTTCTAATGTTAGGATTGCTAAAAGGAAAATTTGGGAAAAGGAACCCATTGTATGGGAAATACTTCAAGAAGTTATGAGGGGACATCCTGTACTGTTGAATAGAGCACCTACCCTGCATAGATTAGGCATACAGGCTTTCCAACCCACTTTAGTAGAGGGGCGTACTATTTGTTTACACCCATTAGTGTGTAAAGGTTTCAATGCAGACTTTGATGGGGATCAAATGGCTGTTCATCTACCTTTATCCTTGGAAGCTCAGGCGGAAGCTCGTTTACTTATGTTTTCTCATATGAATCTCCTATCTCCCGCTATTGGGGATCCTATTTGCGTACCAACCCAAGACATTCTTATCGGACTTTATGTATTAACGATTGGAAACCGTCGAGGTATTTGTGCAAATAGATATAATAGTTGCGGAAACTATCCAAACCAAAAAGTAAATTACAATAATAATAATCCTAAGTATACGAAAGATAAAGAATCTCTTTTTTCTAGTTCCTATGATGCACTGGGAGCTTATAGACAGAAACAAATCTGTTTAGACAGTCCCTTGTGGCTCCGATGGAAACTAGATCAACGCGTCATTGGGTTAAGAGAAGTTCCGATTGAAGTTCAATATGAATCTTTGGGGACTTATCGTGAGATTTTTGCCCACTATCTAGTAGTGGGAAATAGAAAAAAGGAAATCCGTTCTATATACATTCGCACCACTCTTGGTCATATTTCTTTTTATAGAGAAATAGAGGAAGCCATACAAGGATTTAGTCAGGCCTATTCATACACT
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| Protein seq | IRRNNNLAYLLKRSELAPADLVMCQEKLVQEAVDTLLDSGSRGQPTRDGHNKVYKSLSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPLEIAIKLFQLFVIRDLITKRATSNVRIAKRKIWEKEPIVWEILQEVMRGHPVLLNRAPTLHRLGIQAFQPTLVEGRTICLHPLVCKGFNADFDGDQMAVHLPLSLEAQAEARLLMFSHMNLLSPAIGDPICVPTQDILIGLYVLTIGNRRGICANRYNSCGNYPNQKVNYNNNNPKYTKDKESLFSSSYDALGAYRQKQICLDSPLWLRWKLDQRVIGLREVPIEVQYESLGTYREIFAHYLVVGNRKKEIRSIYIRTTLGHISFYREIEEAIQGFSQAYSYT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 9.819145 | 16.596857 | 20.090782 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g16830 | RBH | 0.316089 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0015530 | RBH | 4.694625 | 7.814671 | 28.027016 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0015570 | RBH | 4.625588 | 5.370242 | 14.354862 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0015420 | RBH | 1.941743 | 0.481139 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0017630 | SBH | 0.000000 | 36.063107 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0006870 | SBH | 1.969238 | 1.685488 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0020040 | RBH | 0.259193 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0007360 | SBH | 3.356486 | 12.231203 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
