Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsMH63_07G0074300 | OGI:07013110 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr07:4395371-4397155 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | TCGCCTCAAACCTCAATTCGACAAATCCATCTCCCGCTCCACCCAAAACCCCTCGTCCTCTCTCCCGGCGACAATGGCGGCGGCGGCGGCGCCGCTCGCCGACGACGGCGACGGGATCGTAGACCGTGCCATGTGGCTCGCATGCGCCGCCCCGAACTCCGGCCGCCTCCCCGCCGTCGGCTCGGTGGTCTTCTACTTCGTCGACGGCCACGCCGCTCAGTTTTGCCAGTTCCCCGCCCCTCTCCTGGAGCAGCTCGCCGTCCCCGGCCCCCGCGTCTTCCTCTGTACGGTGGCCGCCGTCCGCCTCCGCGCCGACGCCCTCACCAATGAGGCCTACGCCGAGATCACCCTCGACCCGGTCGCCGACCACGACGTCCCGCGCCTGGCCCCCGCTCCCGCTCCCGCACCCGCCGCCGCCGCCGGTGGCCAGCAGTTGCGTTACTTCGTCAAGACGCTGATGATTTCCGACTTCGACTTCCGCATCCGCTTCTCCGCCCCCATGGCTGACGCCAAGGGCGTCTTCCCGCCGCTGGTCGACGCCAAAGCGGTCCAGCCCCTCCTCGTCAAGGACCTCCATGGATCTCCGATGACGTTCGACTACGGCAGGAAGGGCAAGAGAGTCACGCTCGCCAAGGTCTGGAAGAAATTTCGGGACGACATGGACTTCGTCGACGGAGACAGCGTCATCTTCATGCGTCGCCGCGACGACGACGACGACGACGGCGAGCTGTACGTCGGGGTGCGGCGCCAGCGCACGCTCGAAAGGCCACTCAGGAATACGATGCGCCGGTACAGGCCTCCGACCCCGCCCCAGGCGGCCGTGCAGGAGGCGGTACTAGCCGCGGCGGGTCACGCGGCGGCCGGCGAGCGGTTCACGGTGGCGTACCGGTCGCGGCAGGACGGCGACGAGTTCGTCGTGCCACGCGAGGCGGTGGAGGAGGGGCTCCGCGCCAGACTCACCTCGCTGGCGGAGGTGGAGTTTGTGTGGGCCGTCGAGGACGGCGCGCCGCCCATCGTCGGGCCACGGGGCAAGGTCACCGCCATTGCCACCGGACAGCTGTGGCGAAATCTCGAGGTAATCCATTCTTGACAGCTTCCTGACATCCATGCCAATGAATTTTCATTTTGTTTGTTTGATTGTTTTTTGTCCCTCATCAGCACAGCATCATCATCGATTTCGTTCTTGCATGCCCAGTGTTACTGTTTTGTTCATGCAAGATTAATCACTACCGCGTGATTGATTATTACTCAATAATTGCATTGATATGGATTCTACTCTGCTCGTTGTGCACATCTTCAGATTGTATGGGATGGAAACTCGGAGATGGACATGAGTGCCAACTTTTGGCAAGTTCGACCTGTTGAGGAAGTTGATATTTCTCCTTCTACTCCTCCTCCGAAGAGGCTCAAGAATTGTGAGATTGATGATACCGCCTCTACTTCTGTTTCCGTCGACAATGGAGATGAGCAAGTTCCAACGATGAGGCAACGGCTAGAGGCGCTGATTCCTGATAACATCTGAGGCCAAGTACACCTGCTTGTGACTAACTCAAGTAAAAATTAGTTCTGTCACTTGTGAGTTGTGACTTTGTGAGATTGGGTCCGTCATGAATCAGCTTTGGTCTGCATTTAGTTTGAAGGTTATTCCGAATAGTTTCAAAATTCGGGGAACAAGTTTGCAGTGTTAAATGTCCATTCTAAATCTGACGGAATTGGAAAATGGTGTACCTGCAATCTGATATCTGAAGAACACGAACAGTTCAGATCGAGATGACATAACGACAA
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CDS seq | ATGGCGGCGGCGGCGGCGCCGCTCGCCGACGACGGCGACGGGATCGTAGACCGTGCCATGTGGCTCGCATGCGCCGCCCCGAACTCCGGCCGCCTCCCCGCCGTCGGCTCGGTGGTCTTCTACTTCGTCGACGGCCACGCCGCTCAGTTTTGCCAGTTCCCCGCCCCTCTCCTGGAGCAGCTCGCCGTCCCCGGCCCCCGCGTCTTCCTCTGTACGGTGGCCGCCGTCCGCCTCCGCGCCGACGCCCTCACCAATGAGGCCTACGCCGAGATCACCCTCGACCCGGTCGCCGACCACGACGTCCCGCGCCTGGCCCCCGCTCCCGCTCCCGCACCCGCCGCCGCCGCCGGTGGCCAGCAGTTGCGTTACTTCGTCAAGACGCTGATGATTTCCGACTTCGACTTCCGCATCCGCTTCTCCGCCCCCATGGCTGACGCCAAGGGCGTCTTCCCGCCGCTGGTCGACGCCAAAGCGGTCCAGCCCCTCCTCGTCAAGGACCTCCATGGATCTCCGATGACGTTCGACTACGGCAGGAAGGGCAAGAGAGTCACGCTCGCCAAGGTCTGGAAGAAATTTCGGGACGACATGGACTTCGTCGACGGAGACAGCGTCATCTTCATGCGTCGCCGCGACGACGACGACGACGACGGCGAGCTGTACGTCGGGGTGCGGCGCCAGCGCACGCTCGAAAGGCCACTCAGGAATACGATGCGCCGGTACAGGCCTCCGACCCCGCCCCAGGCGGCCGTGCAGGAGGCGGTACTAGCCGCGGCGGGTCACGCGGCGGCCGGCGAGCGGTTCACGGTGGCGTACCGGTCGCGGCAGGACGGCGACGAGTTCGTCGTGCCACGCGAGGCGGTGGAGGAGGGGCTCCGCGCCAGACTCACCTCGCTGGCGGAGGTGGAGTTTGTGTGGGCCGTCGAGGACGGCGCGCCGCCCATCGTCGGGCCACGGGGCAAGGTCACCGCCATTGCCACCGGACAGCTGTGGCGAAATCTCGAGATTGTATGGGATGGAAACTCGGAGATGGACATGAGTGCCAACTTTTGGCAAGTTCGACCTGTTGAGGAAGTTGATATTTCTCCTTCTACTCCTCCTCCGAAGAGGCTCAAGAATTGTGAGATTGATGATACCGCCTCTACTTCTGTTTCCGTCGACAATGGAGATGAGCAAGTTCCAACGATGAGGCAACGGCTAGAGGCGCTGATTCCTGATAACATCTGA
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Protein seq | MAAAAAPLADDGDGIVDRAMWLACAAPNSGRLPAVGSVVFYFVDGHAAQFCQFPAPLLEQLAVPGPRVFLCTVAAVRLRADALTNEAYAEITLDPVADHDVPRLAPAPAPAPAAAAGGQQLRYFVKTLMISDFDFRIRFSAPMADAKGVFPPLVDAKAVQPLLVKDLHGSPMTFDYGRKGKRVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDDDDGELYVGVRRQRTLERPLRNTMRRYRPPTPPQAAVQEAVLAAAGHAAAGERFTVAYRSRQDGDEFVVPREAVEEGLRARLTSLAEVEFVWAVEDGAPPIVGPRGKVTAIATGQLWRNLEIVWDGNSEMDMSANFWQVRPVEEVDISPSTPPPKRLKNCEIDDTASTSVSVDNGDEQVPTMRQRLEALIPDNI |
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Function | B3 domain-containing protein Os07g0183200 [UniProtKB/Swiss-Prot:Q8H507] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsMH63_07G0074300 | OsMH63_07T0074300.1 | Chr07 | 4395371 | 4397155 | + | maker | ||
CDS seq | ATGGCGGCGGCGGCGGCGCCGCTCGCCGACGACGGCGACGGGATCGTAGACCGTGCCATGTGGCTCGCATGCGCCGCCCCGAACTCCGGCCGCCTCCCCGCCGTCGGCTCGGTGGTCTTCTACTTCGTCGACGGCCACGCCGCTCAGTTTTGCCAGTTCCCCGCCCCTCTCCTGGAGCAGCTCGCCGTCCCCGGCCCCCGCGTCTTCCTCTGTACGGTGGCCGCCGTCCGCCTCCGCGCCGACGCCCTCACCAATGAGGCCTACGCCGAGATCACCCTCGACCCGGTCGCCGACCACGACGTCCCGCGCCTGGCCCCCGCTCCCGCTCCCGCACCCGCCGCCGCCGCCGGTGGCCAGCAGTTGCGTTACTTCGTCAAGACGCTGATGATTTCCGACTTCGACTTCCGCATCCGCTTCTCCGCCCCCATGGCTGACGCCAAGGGCGTCTTCCCGCCGCTGGTCGACGCCAAAGCGGTCCAGCCCCTCCTCGTCAAGGACCTCCATGGATCTCCGATGACGTTCGACTACGGCAGGAAGGGCAAGAGAGTCACGCTCGCCAAGGTCTGGAAGAAATTTCGGGACGACATGGACTTCGTCGACGGAGACAGCGTCATCTTCATGCGTCGCCGCGACGACGACGACGACGACGGCGAGCTGTACGTCGGGGTGCGGCGCCAGCGCACGCTCGAAAGGCCACTCAGGAATACGATGCGCCGGTACAGGCCTCCGACCCCGCCCCAGGCGGCCGTGCAGGAGGCGGTACTAGCCGCGGCGGGTCACGCGGCGGCCGGCGAGCGGTTCACGGTGGCGTACCGGTCGCGGCAGGACGGCGACGAGTTCGTCGTGCCACGCGAGGCGGTGGAGGAGGGGCTCCGCGCCAGACTCACCTCGCTGGCGGAGGTGGAGTTTGTGTGGGCCGTCGAGGACGGCGCGCCGCCCATCGTCGGGCCACGGGGCAAGGTCACCGCCATTGCCACCGGACAGCTGTGGCGAAATCTCGAGATTGTATGGGATGGAAACTCGGAGATGGACATGAGTGCCAACTTTTGGCAAGTTCGACCTGTTGAGGAAGTTGATATTTCTCCTTCTACTCCTCCTCCGAAGAGGCTCAAGAATTGTGAGATTGATGATACCGCCTCTACTTCTGTTTCCGTCGACAATGGAGATGAGCAAGTTCCAACGATGAGGCAACGGCTAGAGGCGCTGATTCCTGATAACATCTGA
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Protein seq | MAAAAAPLADDGDGIVDRAMWLACAAPNSGRLPAVGSVVFYFVDGHAAQFCQFPAPLLEQLAVPGPRVFLCTVAAVRLRADALTNEAYAEITLDPVADHDVPRLAPAPAPAPAAAAGGQQLRYFVKTLMISDFDFRIRFSAPMADAKGVFPPLVDAKAVQPLLVKDLHGSPMTFDYGRKGKRVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDDDDGELYVGVRRQRTLERPLRNTMRRYRPPTPPQAAVQEAVLAAAGHAAAGERFTVAYRSRQDGDEFVVPREAVEEGLRARLTSLAEVEFVWAVEDGAPPIVGPRGKVTAIATGQLWRNLEIVWDGNSEMDMSANFWQVRPVEEVDISPSTPPPKRLKNCEIDDTASTSVSVDNGDEQVPTMRQRLEALIPDNI
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0 | 0 | 0 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
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Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0183200 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g08530 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os07g0183200 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0005240 | RBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0005200 | RBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0005110 | RBH | 0.0 | 0.0 | 0.0 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0005040 | RBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0005160 | RBH | 0.0 | 0.0 | 0.0 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0074400 | RBH | 0.005182 | 0 | 0.097153 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0005680 | RBH | 0.0 | 0.0 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0077300 | RBH | 0.011531 | 0 | 0 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0005140 | RBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0005150 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0005190 | RBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0005270 | RBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0005130 | RBH | 0.0 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G005320 | RBH | 0.0 | 0.0 | 0.232227 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0005100 | RBH | 0.0 | 0.0 | 0.0 |