Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsMH63_06G0089400 OGI:06015190 | 16/16 Minghui 63 | MH63RS3 | HZAU Chr06:5089477-5093106
Gene Symbol -
DNA seq

TCAGAAACAGAGTACATGGTTGATGTTATAATTCCTAAACCTTGTGTTGGAGTTCAGAACAGAAGCAAAACATGATCTCAATGGATAAGCAATATGAGAGATGTTTTGACAGCTAAAAACAGGAGAAGAGAAGTTTTCTCTAGCCTCCTTAGCAAGTTTATCAGCTGTTTTATTGAGAGTTCTCGGGATCCAGTAAACTCTAAGAAGATGATCCGGCAAGGTCTGAATTTGACTCCAAAAAGGTAAGAGACTCCAGTATCCAGGGTCCTCCTGAAAACTTCTCTTCTTTGTCGTGTCCGCCACCATCGAGCAGTCGGTGAGGAAGATCGTATCTGTAAAGTTCAACAACAAAGCAATTTCCAAAGCTAACTGCAAGGCAAGCAATTCTGCTTGAAGAGGGGAATCAGCCATGCAGCTATTGGCTTTAACAAAAAGAGCATTATGCGTGGCAGGGAAGTGGAAGAAAATCCCAATACCGGTTTTATAGTCATCCCAAGATGCATCCACATAACATCTGTTCCCTTCAGGAATTCTTTCCATTTTCCTCTCCATTGACGTTGATGCCTGAACATTAACCTGCATTTGAGTCTGTTCCATACAAGCAGAATAAGATGTAATCATAGCTTCAGCAGCATAACAGACTTGGGTTGGCTCCTGCATCTTTCCCTGAAACTTAAGATCATTTCTAGCTTTCCAAAGTTGCCATAAAATATTGAAAATCCTATTTAAGGTGGCTTTGGTAGAACAATTACTGGTAATATAAGCAATGATGTGAGCCATAGAGACATTATCAGGAAAAAGGTTAGGGCGTAAATTAACATCAGAGATCATCCAGGTTATTTTACTGAAAGGACAATCAAAGAAGAGGTGGAAATCATTTTCAATCGAACCACATCTGCAACAGTTAGGAGTAATATCATTGACCCTAGAATGCAATCTTTGAGCAGTGGGTAAAGCACCCAGAAGTAATCTCCAAGCAAAAACCTTGATTTTCGGAGGAATGCATTTATCTTTCCAAATTTGTTTCAAGATGGCTTTGTCTTGACTACTTACCTGAGTTCCATAATTAGCCTCTTTTTTCCTGATTTCCTTGTAGGCACTTTTGGAATTGCATTCACCATTTGGGGTGAACTTCCAGCAGAGTTTGTCCTCCCCCTCACCTTGAACGATTGGAACCTGCAAAATTTTGTTAACTGCCTGTTGATAAAAAATAGTGTTCAGTTTTTTAACATCCCAGGCTTTTCCTACAGTCCACAGCTCAGCAACAGTGTTGGGCAAAGGAACCTGCAAAGAATCTAACTTGATATAGTCATGAATATCATTATTTAGATCACACCAAGGCTGGCTCCAAATTGAAATGTTGCCATCTGCTAGTTGCCAAGTCACAGCTTCCCTCAGAGTTTTCCTAAAACACAGAATTGAGCTCCAAAACACAGATTTAGAAGAATTACTGGAAGCCTTCCAAAAAGATGTACTTGGGAAATACTTACCTTTCAAAACCTGAGATACCTGCTCTTCCGGCTTAGTGACCAGTCTCCAGGTAGCATTCAGGATAAGGCCTTTGTTAACCAAATGGATGTCTCTAATTCCCAACCAACCTTCCTGAGTCGGCTTGCAAATGTCAGACCAAGATTTTGAACAAAGAGGTTTCTTGTCTTGGCCTTCCTTCACCCCTGTCCACCAAAAGGTTCTAATGATGGAAGTTAATTTGGAAGTGAGCTTTTTGGGCAGAAGAGTGGTGGCCATGTAGTAAATAGGAAGCGAGGCAAAAACAGATTTGATCAAGGTGAGTCTGCCTGCATGGGAAAGTTTATTGGCTTTAAGGATAGTAAGCTTAGTTCTGAACTTATCAACAATGAATTGATAGACAAAGGCTTTGGTTCTGTTGGTTACAAAAAGAGGATGGCCCAGGTGTTTTGTATTAGCATCCACTGGAGCAACATGAAAGATTCTAGTGATGAACTCTTTAATATGATGAGGAGTGTGTTTACTGAAGAGGATGAAGGATTTGTTCCAGTTAGGAGTTTGGCCAGATCTGTTGCAGAAAATATCAATGATCTCTTTGATTATTCTTGCTTCAATCTCTGTGGCTTCACCTGTGATAATCAGGTCATCTGCATAAAGAAGAGAGTGAATAGCAGGTCCTTGAGGACTTAGACTGGTACCTTTAAGCTGATTATTAAGAAGGGCTTCATTCAACTGCTCAGAAAGTTCATTAAGAGCCAGCACAAAAAGATAAGGAGAAAGGGGGGCAACCTTGTCTAACTCCTCTATTAGCATTAAAAGCACCATAGGATTGACCATTGATATTAACAGAAAAAGAGGAGGAGCTGATACAGCCAAGCACCAAATTAATGAAATCAGAATGAAAACCCTTTTTTTTCAGAGCCAAAGCAATAAAATCCCATTCCAATCTATCAAAAGCTTTAGAGAGATCAATTTGCAGTAAAAAAAAAAACCTTTTCTTTTGAAAGACTTGAGGCCAAAAGAGTGAAAATTTTCTTGAGCAATAATAGTGTTATTAGCAATTCTTCTACCTGGGATAAAAGCATGTTGGGAATTGGAAATGAGATCAGGGAGTTTACCTTTGATTCTATTAGCTATGGATTTGGCAATGACTTTGTACATCACATTACACAAGCTGATTGGTCTGAAATCTGCAGGATTAGCAGGCCTATTTTTCTTAGGGATAAGAACAATGTTAGTCTTGTTGAGCTCTCTGGGAAAATTACCTGTGCTGTAGAAGTTTTAAATCAGGCCCATGACATCATTTCTTATCCATCCCCAGGCAGCCTTGAAGAAAGCTGCATTCAGCCCATCAGGCCCAGGGGAGGCATTACTTTTCATACTTCTGATGATCTGCAAAACTTCCTGTTCATCTGGGCATTGCCAGTCAACTTGGGCTGGATCATCATTTCCAGGAAAATAAGAGGTAGACCTGTTGTTTCTATCTGTACAAAAGAGGTTAGAAAAATAATCAATGAAAACATTTGCAATCTCATCAGGATTAGTGATAAGCTGATCATTTGATATGATGGAAGAGATTCTATTTTTCCTTCTTCTTTTGATAGCAGCTTGATGGAAGAAGGAAGTGTTCCTGTCTCCATCTTTGACCCAGTGCTTTTTGGCTCTTTGCTTGTGATAATCTGAAAGCTTGTGCAGAAGGGAGTCATGCTTGGTTATTAGTTCTTTTTCTTTTTCTTGCTGATCTTGTCTGTTGTTAGAAGACTGAATATCAAGAATCTCCTGTTCAGTACTGGCAATCTGGTCTTGAAGAGGCTTCTTTTTCCTGCACCATGTTAGAAGATTCTGCCCTAGATTCTTAGCTTTAGCAACAAAGGAGCCATTAACAATAGAGTTCCAGCTGTTTTTTGCCAAATCATGAAAATCATTTTCAGACAGCCACCAATTTTCAAATTTGAAAGATTTTTTTGGCTTTCTATGAGTAGGATTGAGAAGGATCAAGATAGGAGCATGATCACCATAAATAAGGGGAAGATGATAAACAGTGGTGTAAGGAAATTTAGAGCACCATTCAACATTAGCCAGACACCTATCTAATCTCTCATAGATGACATTGTTACCTGTCCTCTTGTTAGTCCAGGTGTAAGCAGGACCATTGTAGCCCAT

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CDS seq

ATGGGCTACAATGGTCCTGCTTACACCTGGACTAACAAGAGGACAGGTAACAATGTCATCTATGAGAGATTAGATAGGTGTCTGGCTAATGTTGAATGGTGCTCTAAATTTCCTTACACCACTGTTTATCATCTTCCCCTTATTTATGGTGATCATGCTCCTATCTTGATCCTTCTCAATCCTACTCATAGAAAGCCAAAAAAATCTTTCAAATTTGAAAATTGGTGGCTGTCTGAAAATGATTTTCATGATTTGGCAAAAAACAGCTGGAACTCTATTGTTAATGGCTCCTTTGTTGCTAAAGCTAAGAATCTAGGGCAGAATCTTCTAACATGGTGCAGGAAAAAGAAGCCTCTTCAAGACCAGATTGCCAGTACTGAACAGGAGATTCTTGATATTCAGTCTTCTAACAACAGACAAGATCAGCAAGAAAAAGAAAAAGAACTAATAACCAAGCATGACTCCCTTCTGCACAAGCTTTCAGATTATCACAAGCAAAGAGCCAAAAAGCACTGGGTCAAAGATGGAGACAGGAACACTTCCTTCTTCCATCAAGCTGCTATCAAAAGAAGAAGGAAAAATAGAATCTCTTCCATCATATCAAATGATCAGCTTATCACTAATCCTGATGAGATTGCAAATGTTTTCATTGATTATTTTTCTAACCTCTTTTGTACAGATAGAAACAACAGGTCTACCTCTTATTTTCCTGGAAATGATGATCCAGCCCAAGTTGACTGGCAATGCCCAGATGAACAGGAAGTTTTGCAGATCATCAGAAGTATGAAAAGTAATGCCTCCCCTGGGCCTGATGGGCTGAATGCAGCTTTCTTCAAGGCTGCCTGGGGATGGATAAGAAATGATAAAAATAGGCCTGCTAATCCTGCAGATTTCAGACCAATCAGCTTGTGTAATGTGATGTACAAAGTCATTGCCAAATCCATAGCTAATAGAATCAAAGCTCCTCCTCTTTTTCTGTTAATATCAATGGTCAATCCTATGGTGCTTTTAATGCTAATAGAGGAGTTAGACAAGGTTGCCCCCCTTTCTCCTTATCTTTTTGTGCTGGCTCTTAATGAACTTTCTGAGCAGTTGAATGAAGCCCTTCTTAATAATCAGCTTAAAGGTACCAGTCTAAGTCCTCAAGGACCTGCTATTCACTCTCTTCTTTATGCAGATGACCTGATTATCACAGGTGAAGCCACAGAGATTGAAGCAAGAATAATCAAAGAGATCATTGATATTTTCTGCAACAGATCTGGCCAAACTCCTAACTGGAACAAATCCTTCATCCTCTTCAGTAAACACACTCCTCATCATATTAAAGAGTTCATCACTAGAATCTTTCATGTTGCTCCAGTGGATGCTAATACAAAACACCTGGGCCATCCTCTTTTTGTAACCAACAGAACCAAAGCCTTTGTCTATCAATTCATTGTTGATAAGTTCAGAACTAAGCTTACTATCCTTAAAGCCAATAAACTTTCCCATGCAGGCAGACTCACCTTGATCAAATCTGTTTTTGCCTCGCTTCCTATTTACTACATGGCCACCACTCTTCTGCCCAAAAAGCTCACTTCCAAATTAACTTCCATCATTAGAACCTTTTGGTGGACAGGGGTGAAGGAAGGCCAAGACAAGAAACCTCTTTGTTCAAAATCTTGGTCTGACATTTGCAAGCCGACTCAGGAAGGTTGGTTGGGAATTAGAGACATCCATTTGGTTAACAAAGGCCTTATCCTGAATGCTACCTGGAGACTGGTCACTAAGCCGGAAGAGCAGGCAGTTAACAAAATTTTGCAGGTTCCAATCGTTCAAGGTGAGGGGGAGGACAAACTCTGCTGGAAGTTCACCCCAAATGGTGAATGCAATTCCAAAAGTGCCTACAAGGAAATCAGGAAAAAAGAGGCTAATTATGGAACTCAGACTCAAATGCAGGTTAATGTTCAGGCATCAACGTCAATGGAGAGGAAAATGGAAAGAATTCCTGAAGGGAACAGATGTTATGTGGATGCATCTTGGGATGACTATAAAACCGATACGATCTTCCTCACCGACTGCTCGATGGTGGCGGACACGACAAAGAAGAGAAGTTTTCAGGAGGACCCTGGATACTGGAGTCTCTTACCTTTTTGGAGTCAAATTCAGACCTTGCCGGATCATCTTCTTAGAGTTTACTGGATCCCGAGAACTCTCAATAAAACAGCTGATAAACTTGCTAAGGAGGCTAGAGAAAACTTCTCTTCTCCTGTTTTTAGCTGTCAAAACATCTCTCATATTGCTTATCCATTGAGATCATGTTTTGCTTCTGTTCTGAACTCCAACACAAGGTTTAGGAATTATAACATCAACCATGTACTCTGTTTCTGA

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Protein seq

MGYNGPAYTWTNKRTGNNVIYERLDRCLANVEWCSKFPYTTVYHLPLIYGDHAPILILLNPTHRKPKKSFKFENWWLSENDFHDLAKNSWNSIVNGSFVAKAKNLGQNLLTWCRKKKPLQDQIASTEQEILDIQSSNNRQDQQEKEKELITKHDSLLHKLSDYHKQRAKKHWVKDGDRNTSFFHQAAIKRRRKNRISSIISNDQLITNPDEIANVFIDYFSNLFCTDRNNRSTSYFPGNDDPAQVDWQCPDEQEVLQIIRSMKSNASPGPDGLNAAFFKAAWGWIRNDKNRPANPADFRPISLCNVMYKVIAKSIANRIKAPPLFLLISMVNPMVLLMLIEELDKVAPLSPYLFVLALNELSEQLNEALLNNQLKGTSLSPQGPAIHSLLYADDLIITGEATEIEARIIKEIIDIFCNRSGQTPNWNKSFILFSKHTPHHIKEFITRIFHVAPVDANTKHLGHPLFVTNRTKAFVYQFIVDKFRTKLTILKANKLSHAGRLTLIKSVFASLPIYYMATTLLPKKLTSKLTSIIRTFWWTGVKEGQDKKPLCSKSWSDICKPTQEGWLGIRDIHLVNKGLILNATWRLVTKPEEQAVNKILQVPIVQGEGEDKLCWKFTPNGECNSKSAYKEIRKKEANYGTQTQMQVNVQASTSMERKMERIPEGNRCYVDASWDDYKTDTIFLTDCSMVADTTKKRSFQEDPGYWSLLPFWSQIQTLPDHLLRVYWIPRTLNKTADKLAKEARENFSSPVFSCQNISHIAYPLRSCFASVLNSNTRFRNYNINHVLCF

Function Putative ribonuclease H protein At1g65750 [UniProtKB/Swiss-Prot:P0C2F6]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsMH63_06G0089400 OsMH63_06T0089400.1 Chr06 5089477 5093106 - maker
CDS seq

ATGGGCTACAATGGTCCTGCTTACACCTGGACTAACAAGAGGACAGGTAACAATGTCATCTATGAGAGATTAGATAGGTGTCTGGCTAATGTTGAATGGTGCTCTAAATTTCCTTACACCACTGTTTATCATCTTCCCCTTATTTATGGTGATCATGCTCCTATCTTGATCCTTCTCAATCCTACTCATAGAAAGCCAAAAAAATCTTTCAAATTTGAAAATTGGTGGCTGTCTGAAAATGATTTTCATGATTTGGCAAAAAACAGCTGGAACTCTATTGTTAATGGCTCCTTTGTTGCTAAAGCTAAGAATCTAGGGCAGAATCTTCTAACATGGTGCAGGAAAAAGAAGCCTCTTCAAGACCAGATTGCCAGTACTGAACAGGAGATTCTTGATATTCAGTCTTCTAACAACAGACAAGATCAGCAAGAAAAAGAAAAAGAACTAATAACCAAGCATGACTCCCTTCTGCACAAGCTTTCAGATTATCACAAGCAAAGAGCCAAAAAGCACTGGGTCAAAGATGGAGACAGGAACACTTCCTTCTTCCATCAAGCTGCTATCAAAAGAAGAAGGAAAAATAGAATCTCTTCCATCATATCAAATGATCAGCTTATCACTAATCCTGATGAGATTGCAAATGTTTTCATTGATTATTTTTCTAACCTCTTTTGTACAGATAGAAACAACAGGTCTACCTCTTATTTTCCTGGAAATGATGATCCAGCCCAAGTTGACTGGCAATGCCCAGATGAACAGGAAGTTTTGCAGATCATCAGAAGTATGAAAAGTAATGCCTCCCCTGGGCCTGATGGGCTGAATGCAGCTTTCTTCAAGGCTGCCTGGGGATGGATAAGAAATGATAAAAATAGGCCTGCTAATCCTGCAGATTTCAGACCAATCAGCTTGTGTAATGTGATGTACAAAGTCATTGCCAAATCCATAGCTAATAGAATCAAAGCTCCTCCTCTTTTTCTGTTAATATCAATGGTCAATCCTATGGTGCTTTTAATGCTAATAGAGGAGTTAGACAAGGTTGCCCCCCTTTCTCCTTATCTTTTTGTGCTGGCTCTTAATGAACTTTCTGAGCAGTTGAATGAAGCCCTTCTTAATAATCAGCTTAAAGGTACCAGTCTAAGTCCTCAAGGACCTGCTATTCACTCTCTTCTTTATGCAGATGACCTGATTATCACAGGTGAAGCCACAGAGATTGAAGCAAGAATAATCAAAGAGATCATTGATATTTTCTGCAACAGATCTGGCCAAACTCCTAACTGGAACAAATCCTTCATCCTCTTCAGTAAACACACTCCTCATCATATTAAAGAGTTCATCACTAGAATCTTTCATGTTGCTCCAGTGGATGCTAATACAAAACACCTGGGCCATCCTCTTTTTGTAACCAACAGAACCAAAGCCTTTGTCTATCAATTCATTGTTGATAAGTTCAGAACTAAGCTTACTATCCTTAAAGCCAATAAACTTTCCCATGCAGGCAGACTCACCTTGATCAAATCTGTTTTTGCCTCGCTTCCTATTTACTACATGGCCACCACTCTTCTGCCCAAAAAGCTCACTTCCAAATTAACTTCCATCATTAGAACCTTTTGGTGGACAGGGGTGAAGGAAGGCCAAGACAAGAAACCTCTTTGTTCAAAATCTTGGTCTGACATTTGCAAGCCGACTCAGGAAGGTTGGTTGGGAATTAGAGACATCCATTTGGTTAACAAAGGCCTTATCCTGAATGCTACCTGGAGACTGGTCACTAAGCCGGAAGAGCAGGCAGTTAACAAAATTTTGCAGGTTCCAATCGTTCAAGGTGAGGGGGAGGACAAACTCTGCTGGAAGTTCACCCCAAATGGTGAATGCAATTCCAAAAGTGCCTACAAGGAAATCAGGAAAAAAGAGGCTAATTATGGAACTCAGACTCAAATGCAGGTTAATGTTCAGGCATCAACGTCAATGGAGAGGAAAATGGAAAGAATTCCTGAAGGGAACAGATGTTATGTGGATGCATCTTGGGATGACTATAAAACCGATACGATCTTCCTCACCGACTGCTCGATGGTGGCGGACACGACAAAGAAGAGAAGTTTTCAGGAGGACCCTGGATACTGGAGTCTCTTACCTTTTTGGAGTCAAATTCAGACCTTGCCGGATCATCTTCTTAGAGTTTACTGGATCCCGAGAACTCTCAATAAAACAGCTGATAAACTTGCTAAGGAGGCTAGAGAAAACTTCTCTTCTCCTGTTTTTAGCTGTCAAAACATCTCTCATATTGCTTATCCATTGAGATCATGTTTTGCTTCTGTTCTGAACTCCAACACAAGGTTTAGGAATTATAACATCAACCATGTACTCTGTTTCTGA

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Protein seq

MGYNGPAYTWTNKRTGNNVIYERLDRCLANVEWCSKFPYTTVYHLPLIYGDHAPILILLNPTHRKPKKSFKFENWWLSENDFHDLAKNSWNSIVNGSFVAKAKNLGQNLLTWCRKKKPLQDQIASTEQEILDIQSSNNRQDQQEKEKELITKHDSLLHKLSDYHKQRAKKHWVKDGDRNTSFFHQAAIKRRRKNRISSIISNDQLITNPDEIANVFIDYFSNLFCTDRNNRSTSYFPGNDDPAQVDWQCPDEQEVLQIIRSMKSNASPGPDGLNAAFFKAAWGWIRNDKNRPANPADFRPISLCNVMYKVIAKSIANRIKAPPLFLLISMVNPMVLLMLIEELDKVAPLSPYLFVLALNELSEQLNEALLNNQLKGTSLSPQGPAIHSLLYADDLIITGEATEIEARIIKEIIDIFCNRSGQTPNWNKSFILFSKHTPHHIKEFITRIFHVAPVDANTKHLGHPLFVTNRTKAFVYQFIVDKFRTKLTILKANKLSHAGRLTLIKSVFASLPIYYMATTLLPKKLTSKLTSIIRTFWWTGVKEGQDKKPLCSKSWSDICKPTQEGWLGIRDIHLVNKGLILNATWRLVTKPEEQAVNKILQVPIVQGEGEDKLCWKFTPNGECNSKSAYKEIRKKEANYGTQTQMQVNVQASTSMERKMERIPEGNRCYVDASWDDYKTDTIFLTDCSMVADTTKKRSFQEDPGYWSLLPFWSQIQTLPDHLLRVYWIPRTLNKTADKLAKEARENFSSPVFSCQNISHIAYPLRSCFASVLNSNTRFRNYNINHVLCF

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0160885 0 0.003155

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_06g0205337 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os06g10390 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os06g0205337 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_06g0007280 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_06g0007090 RBH 0.0 0.0 0.483396
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_06g0007130 RBH 0.0 0.000000 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_06g0007200 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_06g0007100 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU NA NA NA NA NA
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_06g0006890 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_06G0089500 RBH 0.0310115 0.0117235 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_06g0007290 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_06g0007160 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_06g0007210 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_Ung0028580 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_06g0007080 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_06G006960 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_06g0007230 RBH 0.0 0.000000 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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