Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsMH63_01G0394900 OGI:01073680 | 1/16 Minghui 63 | MH63RS3 | HZAU Chr01:25392311-25396100
Gene Symbol -
DNA seq

AAATTTAAATTTAAACATGCCTTAGTTAACAAATTCAAATTTCACAACTTACTTAACAAATTCAAATTTGAACATGCCTTAGTTAACAAATTTAAATTACACAACTTAGTTGACAAATATAAATTTGAACATGCCTTGGTTAACAAATTCAAATAACACAACTTACACAACTTAGTTGACAAATTCAAATTTGAACATGCCTTAGTTGAATTCACAGTTCTAGATTCACATATCACCTTTACAAAAATTCACAGATCACAGATCAAAGATTCACAGATCACATTGACAAAAATTCATAGATCACTTGACTAAGATCACATATCACATGGACAATTCACAGAAGAGTTTCAACAATCACAGACTCACAGTTGTAGATTCAAAAATTTCACCAAGTCAAATTACCCAAAATCACAAATTTTCACCCAAACTTTCACCCAAAAAACTTGACTTAGATCACAGATGACATGGACAATTCACAGAAATCACAGTTCTAAGATTCAAAAGTTTCACTAAGTCAAAAATTACCCAAAATCATAAACTTTCACCCAAAAACTTGACACAAGTATTTCAATGAATAAAGTAGCTGTGTAGTGCAATGGCTGCCTCGTTAAAAACCTTTCTAGGTAAAAACTCACACCTCGTGAGAAAACCCTAGAAAGGAAAAAAGAGTGCAGCCCACAGCATTAATCAAATGTTCATAATAAAGTCCAAGTCCAATACAATCATCCAGTCCCAGTGGCAGTGGTTACTTCATCAAGAAACAAATTGTCAAAAGAGTTTATAAGCTCTAAATTCTCCATGGTATGTTGCATCTTTGCATCTGCTTGCTCCCAATCTTTGATTAGTGCCAAAGCTTGCACCATGTCAGGAGCTAGACGCCGTCGTCGCTCCTCGATGATCCTGCCAGTTAAGCTAAAAGCAGATTCCGATGATATAGTAGAAACAGGAACAGTCAAAACATCCCTAGCTAATATGGAAAGAATAGGATAGGTGTGGTTGTGCTCATGCCACCAGTTAAGGATATTGAAGTCATCATCGTATTGGTTGACAGTGTCACTGTCAAGATAGGCAAACAACTCAGATGCATTCATGTTAGCAGTAGAAGAAACAGCCTGAATCAAAGCGGTAGCAGAAGTTCTCCTAGAAAATGCACCAGCACCAAGTCCAGATCCTGCACTGGCACCAGCATCACCAAGTCCAGAACCTGGACTGGCACTAGCACCAAATCCAGAACCTGGACTGGCACCAGCACCAAATCCAGAACCTGGACTGGTACTAGCACCAGCATTACCAGCACCAAGTCCAGCACCAAGACTGGAACCACAAGCAGCAGCACCAAAAATTTTCCCCCAAGCTGTCTTTTTCTTACCAGAAGAAGAGCTTGGGGTTGCCCTTTGTAATCTCACAGCACCAAATTTACTTTCATACTTAGCATACATGTCAGACAATGCAGCCCTAACCTCATTTAAATATGCAGAGTAATCACCACTAATAAGTTGTCCCATAATTTGGAGAACATTGCTAAAACCCCTGATCTTGGCCCTAGGATCCAAGATAAAAGCAAATGAATACAGAAATGGAATCTCAGACCAGTATGACAAGAACTTATTTTTCATGGGAACAACAACATTTCTAAGGTTCCAATCATTCTCATAAGTATTTAGATGTCCAGCAATCTCAAGAATGTGATGCATAATTAATGGAGATGTTGGATAATAAACACCAGACAAAATAACAGTTGAATCATAAAATTGTTCAAGGAATAAAAGAACAGTTTCAGCAATTGTCCAGTGTAAATCAGTCAGTAATGGCTGACCATCAGCCATTGGATGGTGAGATGCAATAAACACTGAAAAAATGACCCTATGTGGCAAGAGATACTTAAGCATTAGATAAGTTGCATTCCATCTAACATCCATGTCCAAACCAAATTTACGAGGACGAATACCTTTAGCAATGCAGAAGTTTTTGTATAAAGCAATGCGCTGATTAGATGCATTTATAAATGAAATAGCAGTTCTAAAATCTTGAAGCATGGGTTTGAAGATTTCTAGACCAGCCTTAACAATTAAATTGATGATATGACATGCACAACGCTGATGCAAATATAAATCACCAATATAACCAGACAGAGCAGGTTTAAGACTATCCATTGCTTTAGAATTAGCAGAGGCATTGTCCAGGGTAATAGAGAAGATCTTATTAGTCAAACCATATTCTTGAACAACAGAAAGCACACGTTCAGAAATATTTTCAGCATTGTGTGACACATCAATTAGCACCAGTCCCAAAATCCTCTTCTCTAATTGCCAATTAGAATTAACAAAATGGGCAACAACACTCAAATAATCCTCCTTAGCATTACCAGACCATATATCAGATGTCAAAGCAACAGAGCTAACAGACTTCAAAGTATCAATAAGCATAGCACGTCTCTTGTCGAAGACCTTAAAAACGTCCCTACTGATAGTTTGCCTAGAGACAACACTAAATCTAGGGTTGTGAGCATTCTGAATATACTCCTCAAAAGCAGCAGATTGACCAAAAGTAAGTGGAAGATCCTCTCTAGCAATCAACCTAACCAACTCAGTTCTAGCCACATCCGGTTTATATTCCCATTGACTAACAGAACCATCAGCATTAAACCTAAGCATGGACTGAGACAAAGCACCAACATTTCTAGGTTTGCACGATTTAATATGCCTAAGCAAATGTCCAGTACCACCAGTTGAACGAGCAGACAATGTTTTATGACAGTAATTGCATTTAGCAGAAACGCGAACCTGAGCGCCATTGCGCTCTTCAAAGAGTTCTTCAAAGTCGTCCCATACCTCAGACCTGGACCTCTTGTTGCTAGCACTTGAGCCAGACGGAGCACCGTTGCCATCGGCACCGGTACCATCATCGTGTGGCTCCGGATGCGACAGATCTCTCAGAGGTGAAGCAGTGTTGCCAAACACCTCGATGCGTTCCTCCTCCAAGTCATCTTCGTCATCACCCTGCGTCCCCATCACCCTCGCCTCGTAGTTGCATGAGGTTGGATCACCATCCATCGCAGGCACTCCGGTTCCTCTCAACGGTGGCTGCCGCCTGCCGCTCAGCGACCTGCAAGAACAAATGAAACAACGACGAGAGCAGAGAGTAGTTACGGATCTGATCGAATAGAGAAAATAAACTAAAAAAAAAGCTTGTACCTGCGCATCCGGAGCACCGGAGTTGCCGTTGATGATAGAGATCCACAGATCTACGAGAAGACAAGAGGAGAGACTAGATTTGGGGGGTGGATGAGTGGATCTGAGTATCTGACGAAGAGAAACGATGAGGGTTGCAAAAAAAAGTACAGAATGGAGAGGAAATCGACAATGCGACCGTCGATCCGGTGACCGGAGAGGCGGAGACGAAGAGCTCACGGAGTCACGGTCACAGATCAGCCAAAGAGATGAAAGAAAAGGATAGAGAAGAGACGACCCTCAAGCCCCCAGCGGGAGCCCGCTGACCCTCGGTGCTAGATCCGGCGAGGCATCCATCGGAGACGCCGACGAAGAGGGATGGAGGCGTGGAGGGCTGAGGGGTCGGAGCCTGGAGGTGGAGGCGGAGCGGGCGAGCGGCGGATCGGTCGAGACTCCAGACTGATGTGGCTAGGGTTAGGGTTTGTCGGTTTGATGCGGTTTGGGGTATTTATACCCACCCGGCATAACAGGCCTCGGTCGGGCCGTGCCTGCCGTTGGACCGTGCCGGGCCGTGCCGGCCCACCGTGCCGACCTCTTTCGTGCCGGGCCGTGCCGGCCCA

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CDS seq

ATGCGCAGGTCGCTGAGCGGCAGGCGGCAGCCACCGTTGAGAGGAACCGGAGTGCCTGCGATGGATGGTGATCCAACCTCATGCAACTACGAGGCGAGGGTGATGGGGACGCAGGGTGATGACGAAGATGACTTGGAGGAGGAACGCATCGAGGTGTTTGGCAACACTGCTTCACCTCTGAGAGATCTGTCGCATCCGGAGCCACACGATGATGGTACCGGTGCCGATGGCAACGGTGCTCCGTCTGGCTCAAGTGCTAGCAACAAGAGGTCCAGGTCTGAGGTATGGGACGACTTTGAAGAACTCTTTGAAGAGCGCAATGGCGCTCAGGTTCGCGTTTCTGCTAAATGCAATTACTGTCATAAAACATTGTCTGCTCGTTCAACTGGTGGTACTGGACATTTGCTTAGGCATATTAAATCGTGCAAACCTAGAAATGTTGGTGCTTTGTCTCAGTCCATGCTTAGGTTTAATGCTGATGGTTCTGTTAGTCAATGGGAATATAAACCGGATGTGGCTAGAACTGAGTTGGTTAGGTTGATTGCTAGAGAGGATCTTCCACTTACTTTTGGTCAATCTGCTGCTTTTGAGGAGTATATTCAGAATGCTCACAACCCTAGATTTAGTGTTGTCTCTAGGCAAACTATCAGTAGGGACGTTTTTAAGGTCTTCGACAAGAGACGTGCTATGCTTATTGATACTTTGAAGTCTGTTAGCTCTGTTGCTTTGACATCTGATATATGGTCTGGTAATGCTAAGGAGGATTATTTGAGTGTTGTTGCCCATTTTGTTAATTCTAATTGGCAATTAGAGAAGAGGATTTTGGGACTGGTGCTAATTGATGTGTCACACAATGCTGAAAATATTTCTGAACGTGTGCTTTCTGTTGTTCAAGAATATGGTTTGACTAATAAGATCTTCTCTATTACCCTGGACAATGCCTCTGCTAATTCTAAAGCAATGGATAGTCTTAAACCTGCTCTGTCTGGTTATATTGGTGATTTATATTTGCATCAGCGTTGTGCATGTCATATCATCAATTTAATTGTTAAGGCTGGTCTAGAAATCTTCAAACCCATGCTTCAAGATTTTAGAACTGCTATTTCATTTATAAATGCATCTAATCAGCGCATTGCTTTATACAAAAACTTCTGCATTGCTAAAGGTATTCGTCCTCGTAAATTTGGTTTGGACATGGATGTTAGATGGAATGCAACTTATCTAATGCTTAAGTATCTCTTGCCACATAGGGTCATTTTTTCAGTGTTTATTGCATCTCACCATCCAATGGCTGATGGTCAGCCATTACTGACTGATTTACACTGGACAATTGCTGAAACTGTTCTTTTATTCCTTGAACAATTTTATGATTCAACTGTTATTTTGTCTGGTGTTTATTATCCAACATCTCCATTAATTATGCATCACATTCTTGAGATTGCTGGACATCTAAATACTTATGAGAATGATTGGAACCTTAGAAATGTTGTTGTTCCCATGAAAAATAAGTTCTTGTCATACTGGTCTGAGATTCCATTTCTGTATTCATTTGCTTTTATCTTGGATCCTAGGGCCAAGATCAGGGGTTTTAGCAATGTTCTCCAAATTATGGGACAACTTATTAGTGGTGATTACTCTGCATATTTAAATGAGGTTAGGGCTGCATTGTCTGACATGTATGCTAAGTATGAAAGTAAATTTGGTGCTGTGAGATTACAAAGGGCAACCCCAAGCTCTTCTTCTGGTAAGAAAAAGACAGCTTGGGGGAAAATTTTTGGTGCTGCTGCTTGTGGTTCCAGTCTTGGTGCTGGACTTGGTGCTGGTAATGCTGGTGCTAGTACCAGTCCAGGTTCTGGATTTGGTGCTGGTGCCAGTCCAGGTTCTGGATTTGGTGCTAGTGCCAGTCCAGGTTCTGGACTTGGTGATGCTGGTGCCAGTGCAGGATCTGGACTTGGTGCTGGTGCATTTTCTAGGAGAACTTCTGCTACCGCTTTGATTCAGGCTGTTTCTTCTACTGCTAACATGAATGCATCTGAGTTGTTTGCCTATCTTGACAGTGACACTGTCAACCAATACGATGATGACTTCAATATCCTTAACTGGTGGCATGAGCACAACCACACCTATCCTATTCTTTCCATATTAGCTAGGGATGTTTTGACTGTTCCTGTTTCTACTATATCATCGGAATCTGCTTTTAGCTTAACTGGCAGGATCATCGAGGAGCGACGACGGCGTCTAGCTCCTGACATGGTGCAAGCTTTGGCACTAATCAAAGATTGGGAGCAAGCAGATGCAAAGATGCAACATACCATGGAGAATTTAGAGCTTATAAACTCTTTTGACAATTTGTTTCTTGATGAAGTAACCACTGCCACTGGGACTGGATGA

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Protein seq

MRRSLSGRRQPPLRGTGVPAMDGDPTSCNYEARVMGTQGDDEDDLEEERIEVFGNTASPLRDLSHPEPHDDGTGADGNGAPSGSSASNKRSRSEVWDDFEELFEERNGAQVRVSAKCNYCHKTLSARSTGGTGHLLRHIKSCKPRNVGALSQSMLRFNADGSVSQWEYKPDVARTELVRLIAREDLPLTFGQSAAFEEYIQNAHNPRFSVVSRQTISRDVFKVFDKRRAMLIDTLKSVSSVALTSDIWSGNAKEDYLSVVAHFVNSNWQLEKRILGLVLIDVSHNAENISERVLSVVQEYGLTNKIFSITLDNASANSKAMDSLKPALSGYIGDLYLHQRCACHIINLIVKAGLEIFKPMLQDFRTAISFINASNQRIALYKNFCIAKGIRPRKFGLDMDVRWNATYLMLKYLLPHRVIFSVFIASHHPMADGQPLLTDLHWTIAETVLLFLEQFYDSTVILSGVYYPTSPLIMHHILEIAGHLNTYENDWNLRNVVVPMKNKFLSYWSEIPFLYSFAFILDPRAKIRGFSNVLQIMGQLISGDYSAYLNEVRAALSDMYAKYESKFGAVRLQRATPSSSSGKKKTAWGKIFGAAACGSSLGAGLGAGNAGASTSPGSGFGAGASPGSGFGASASPGSGLGDAGASAGSGLGAGAFSRRTSATALIQAVSSTANMNASELFAYLDSDTVNQYDDDFNILNWWHEHNHTYPILSILARDVLTVPVSTISSESAFSLTGRIIEERRRRLAPDMVQALALIKDWEQADAKMQHTMENLELINSFDNLFLDEVTTATGTG

Function Zinc finger BED domain-containing protein RICESLEEPER 2 [UniProtKB/Swiss-Prot:Q6AVI0]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsMH63_01G0394900 OsMH63_01T0394900.1 Chr01 25392311 25396100 - maker
CDS seq

ATGCGCAGGTCGCTGAGCGGCAGGCGGCAGCCACCGTTGAGAGGAACCGGAGTGCCTGCGATGGATGGTGATCCAACCTCATGCAACTACGAGGCGAGGGTGATGGGGACGCAGGGTGATGACGAAGATGACTTGGAGGAGGAACGCATCGAGGTGTTTGGCAACACTGCTTCACCTCTGAGAGATCTGTCGCATCCGGAGCCACACGATGATGGTACCGGTGCCGATGGCAACGGTGCTCCGTCTGGCTCAAGTGCTAGCAACAAGAGGTCCAGGTCTGAGGTATGGGACGACTTTGAAGAACTCTTTGAAGAGCGCAATGGCGCTCAGGTTCGCGTTTCTGCTAAATGCAATTACTGTCATAAAACATTGTCTGCTCGTTCAACTGGTGGTACTGGACATTTGCTTAGGCATATTAAATCGTGCAAACCTAGAAATGTTGGTGCTTTGTCTCAGTCCATGCTTAGGTTTAATGCTGATGGTTCTGTTAGTCAATGGGAATATAAACCGGATGTGGCTAGAACTGAGTTGGTTAGGTTGATTGCTAGAGAGGATCTTCCACTTACTTTTGGTCAATCTGCTGCTTTTGAGGAGTATATTCAGAATGCTCACAACCCTAGATTTAGTGTTGTCTCTAGGCAAACTATCAGTAGGGACGTTTTTAAGGTCTTCGACAAGAGACGTGCTATGCTTATTGATACTTTGAAGTCTGTTAGCTCTGTTGCTTTGACATCTGATATATGGTCTGGTAATGCTAAGGAGGATTATTTGAGTGTTGTTGCCCATTTTGTTAATTCTAATTGGCAATTAGAGAAGAGGATTTTGGGACTGGTGCTAATTGATGTGTCACACAATGCTGAAAATATTTCTGAACGTGTGCTTTCTGTTGTTCAAGAATATGGTTTGACTAATAAGATCTTCTCTATTACCCTGGACAATGCCTCTGCTAATTCTAAAGCAATGGATAGTCTTAAACCTGCTCTGTCTGGTTATATTGGTGATTTATATTTGCATCAGCGTTGTGCATGTCATATCATCAATTTAATTGTTAAGGCTGGTCTAGAAATCTTCAAACCCATGCTTCAAGATTTTAGAACTGCTATTTCATTTATAAATGCATCTAATCAGCGCATTGCTTTATACAAAAACTTCTGCATTGCTAAAGGTATTCGTCCTCGTAAATTTGGTTTGGACATGGATGTTAGATGGAATGCAACTTATCTAATGCTTAAGTATCTCTTGCCACATAGGGTCATTTTTTCAGTGTTTATTGCATCTCACCATCCAATGGCTGATGGTCAGCCATTACTGACTGATTTACACTGGACAATTGCTGAAACTGTTCTTTTATTCCTTGAACAATTTTATGATTCAACTGTTATTTTGTCTGGTGTTTATTATCCAACATCTCCATTAATTATGCATCACATTCTTGAGATTGCTGGACATCTAAATACTTATGAGAATGATTGGAACCTTAGAAATGTTGTTGTTCCCATGAAAAATAAGTTCTTGTCATACTGGTCTGAGATTCCATTTCTGTATTCATTTGCTTTTATCTTGGATCCTAGGGCCAAGATCAGGGGTTTTAGCAATGTTCTCCAAATTATGGGACAACTTATTAGTGGTGATTACTCTGCATATTTAAATGAGGTTAGGGCTGCATTGTCTGACATGTATGCTAAGTATGAAAGTAAATTTGGTGCTGTGAGATTACAAAGGGCAACCCCAAGCTCTTCTTCTGGTAAGAAAAAGACAGCTTGGGGGAAAATTTTTGGTGCTGCTGCTTGTGGTTCCAGTCTTGGTGCTGGACTTGGTGCTGGTAATGCTGGTGCTAGTACCAGTCCAGGTTCTGGATTTGGTGCTGGTGCCAGTCCAGGTTCTGGATTTGGTGCTAGTGCCAGTCCAGGTTCTGGACTTGGTGATGCTGGTGCCAGTGCAGGATCTGGACTTGGTGCTGGTGCATTTTCTAGGAGAACTTCTGCTACCGCTTTGATTCAGGCTGTTTCTTCTACTGCTAACATGAATGCATCTGAGTTGTTTGCCTATCTTGACAGTGACACTGTCAACCAATACGATGATGACTTCAATATCCTTAACTGGTGGCATGAGCACAACCACACCTATCCTATTCTTTCCATATTAGCTAGGGATGTTTTGACTGTTCCTGTTTCTACTATATCATCGGAATCTGCTTTTAGCTTAACTGGCAGGATCATCGAGGAGCGACGACGGCGTCTAGCTCCTGACATGGTGCAAGCTTTGGCACTAATCAAAGATTGGGAGCAAGCAGATGCAAAGATGCAACATACCATGGAGAATTTAGAGCTTATAAACTCTTTTGACAATTTGTTTCTTGATGAAGTAACCACTGCCACTGGGACTGGATGA

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Protein seq

MRRSLSGRRQPPLRGTGVPAMDGDPTSCNYEARVMGTQGDDEDDLEEERIEVFGNTASPLRDLSHPEPHDDGTGADGNGAPSGSSASNKRSRSEVWDDFEELFEERNGAQVRVSAKCNYCHKTLSARSTGGTGHLLRHIKSCKPRNVGALSQSMLRFNADGSVSQWEYKPDVARTELVRLIAREDLPLTFGQSAAFEEYIQNAHNPRFSVVSRQTISRDVFKVFDKRRAMLIDTLKSVSSVALTSDIWSGNAKEDYLSVVAHFVNSNWQLEKRILGLVLIDVSHNAENISERVLSVVQEYGLTNKIFSITLDNASANSKAMDSLKPALSGYIGDLYLHQRCACHIINLIVKAGLEIFKPMLQDFRTAISFINASNQRIALYKNFCIAKGIRPRKFGLDMDVRWNATYLMLKYLLPHRVIFSVFIASHHPMADGQPLLTDLHWTIAETVLLFLEQFYDSTVILSGVYYPTSPLIMHHILEIAGHLNTYENDWNLRNVVVPMKNKFLSYWSEIPFLYSFAFILDPRAKIRGFSNVLQIMGQLISGDYSAYLNEVRAALSDMYAKYESKFGAVRLQRATPSSSSGKKKTAWGKIFGAAACGSSLGAGLGAGNAGASTSPGSGFGAGASPGSGFGASASPGSGLGDAGASAGSGLGAGAFSRRTSATALIQAVSSTANMNASELFAYLDSDTVNQYDDDFNILNWWHEHNHTYPILSILARDVLTVPVSTISSESAFSLTGRIIEERRRRLAPDMVQALALIKDWEQADAKMQHTMENLELINSFDNLFLDEVTTATGTG

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.011568 0.030079 0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_01g0698300 SBH 0.749589 0.867366 1.800701
Nipponbare | IRGSP 1.0 | MSU LOC_Os01g53870 SBH 0.0 0.077962 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os01g0802400 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) NA NA NA NA NA
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_01g0030290 SBH 2.456088 9.163258 11.191405
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Minghui 63 | MH63RS3 | HZAU OsMH63_01G0397000 RBH 0.043993 0.048375 0.0167755
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_01G0508000 SBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) NA NA NA NA NA
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_01g0023330 SBH 0.027272 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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