Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_10g0017610 | OGI:10062680 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr10:22738245-22745864 | ||||||||
| Gene Symbol | GSTU3, OsGSTU3, OsGSTU29, GSTU29, Osgstu4, GST, GSTU18, OsGSTU18, OsGSTU7, GSTU7, GSTU30, OsGSTU30 | ||||||||||
| DNA seq | ATGGCCGGAGGAGACGAGCTGAAGCTGCTCGGCGCATTTCCAAGCGCATATGTCACCAGAGTGGAGCTGGCTCTCGGCTTCAAGGGCCTGAGCTACGAGTACGTCAAGGAGGACTTGGCCAACAAGAGCGAGCTCCTACTCAGCTCCAACCCGGTGCACAAGAAGGTCCCTGTGCTCATCCACAACGGCAAGCCCATCTCCGAGTCGCAGGTCATCTTGGAGTACATCGACGAGGCCTTCACCGGCGCCTCCCTACTCTCCAGGGACCCCTATGAGCGAGCCGTCGCTCGTTTCTGGGTTGCATACATCGACGACAAGGTAGGGCGCATCTTTTATCAAAAGCAATAAAAACTTAAAAAATAGAGATATCCTGATGAGACAAATCTCTAACTCTCTTAAAAAATATTTAGTTGATATAACATTTATAAAACCATATAGAGCATCATATCACTATAGCAACTACAATTTGACCAACATAGATATGACACACCTTTTGTACAGATGAGGCTTCCCTGACTTTGTGCAAAAACAGCACAAAGTCAGAGAATCCACTGTTCTTTAGCAAATACTCTATCCGTTCTGGAATATAAACATTTTCAACAATGAATCTTGATAATTGTGTGTCCCGGTACATAGTTAAAAGTTACTATATTTTGGAATGGAGGTGGTATGTATGTATGGGTCCTGGTTTAACTGGTTACTGATGCAACGACATGTTTGTATGTAGTTCATTACATCATGGTACCCAATGATACTAGGAAAGACGAGGGAGGAGAAGGAGGGGTTGAAGCAGACGTTCGCGGCGGTAGAGCCCTGAAGGATAGCTCCAAGGGAAAGCCCTTTTTCGGTGGAGACACCGTTGGGCTCGTAGATATCACGCTTGGTAGCCTGATCGCATGGATGAAAGCAACTGAGGTGCTCACCGGTGCCAAGATCTTCGATCCGGCCAAGACTCCGCTCCTGGCTGCGTGGACGGAGCGCTTTGCCGAGCTCGACACCACCAAGAAGGTGCTACCGGACGTTGCCGGGTATGTCGAGTATGTCAACAAGAGGCGGCAGACACAGGCTGCCACAGCTGCCGTAGTGGCTTCAAACAGCTAAGATGGCATCTTGACCATGTAGTAATATCCCCATGGTTTCGGGTAAAATAATGTGCTTATATATTGTCGGAAAACAGTAGAATTTGTTGCTTGGTCGCAATGTTTGTGTCTGTTCTGTGTTGCTTGCTCACTTGGTGTAAGTCAGAATAACGAGAGGAATATTGATTTTGTTACTCTGTTTTCTCTGTTCTGTGCTTGCTGCTCTATTTGTTTATCTATGTTCCGATTTAAATTCAACTGATCTGCCAAAGGGAGATGCATAATTTCGTGGATTTCAGTTTGGATTTCTTTTTTAGTGAAGTTTCATATCAAGCCACTTTGGCCCATGTTTTTTTTTTTTACTTGACATCTCCTATTTTATTTTATTTTTTCCCACATGACCCCTTTTACTCTTATTCTCAATCTGTTGCCAACACCTATCTGGGTCCTGGCATCCTCCACCTATCTGGAGTTAACAACATTTTGAGGAGCAGGGGTTAAAAAATAAAAATAAGGGTCAAATCGAAAATGTCTGTTAAAGAAAATCTAAAGTGAAACTTTCATAAGAAAAGTGAGTCGAAACTCTAAACTGAATTTCACTAGGGGACTTACAAGAAGACTGCTGGAGTTCTGGACAGTTCCAACGCTGACGTTCTGCTGGAGTTCTTTAATGAAACTAATTTAATTACCGTCTCAATATTCTCAATATATAGCAACTCAAGACTGAATTCCACATATTCTAGAACTACAAATCTAAATAAATATTCAGATTTATAGTCCTAAGATATATTAAATCTGGTCCTAGATTGCTATATATTAGAACGGAGGGAGATATAAACTAGGTCAAACTTAATAGAAATTGACTATGAAAATAGTCAAACTATTTGTAATATGAAATGAATGGAGTATAAACAAGAGTCCGGTCAGACCTCCGTCATCACTCACGTATCCATTACATTTACGAGTAGGGACTGCAGATGTGACTGTCCCGATCGATAAAGATCGTTTAATTTTTTTGACCAATTTAGCGGATCACACGTTTCAATACATCTGAATATGGGAGCGCGCATTCAACGAGCCACGCAATCGGTATACTAGCTACCCCATCCACAGAACACGAACCAAAACCATTTATTTAACCATCTCAAATCTCAAGACCTCACTCACGCGATTCACCAGTTCACCACCAAGCTACACAGCTAGAAGGCAATGGCCGGAGCAGGAGATGAGCTGAAGCTGCTGGGCATGTGGACGAGCCCGTTCGCTCTTCGAGTGAAGCTTGCGCTCAGCTTCAAGGGCCTGAGCTACGAGTACGCCGAGGAGGACCTCAGCAACAAGAGCGAGCTGCTGCTCAGCTCCAACCCGGTGCACAAGAAGGTGCCCGTGCTCATCCACAACGGCAAGCCCATCTGCGAGTCGCAGGTCATCGTGCAGTACATCGACGAGGCCTTCCCCGGCGCCGGCGTGCCCCTCCTCCCCTCCGACCCCTACGAGCGCGCCGTCGCTCGCTTCTGGGCCGCCTACATCGACGACAAGGTGATTCACAAATTGCCTCAAATCAATCGCAACGCCCTGTCTTGAATTTGCATCGAATCAATTCCAAATGACGATATTAATTTCTGGTGATTGATTAACTGTGTTAACTGCTGCGCTGGGTGCGTGCGTCGTCGCAGCTGTTGAAGTCGTGGCTGCAGGCGTCGATGGGCAAGACGGAGGAGGAGAAGGCGGAGGCGTTGAAGGAGACGTTCGCGGCGGTGGCGAACCTGGAGGCGGCCTTCGAGGGGTGCTCCAAGGGGAAGCCCTTCTTCGGCGGCGACGCCGTCGGGTACCTGGACGTCACGCTCGGCGCCCTGGTCAGCTGGGTGCACGCCGGCGAGGCCCTGTACGGGATGAGGCTCTTCGATGCCACCAGGAGCCCGCTCCTGGACGCGTGGGTGGACCGCTTCGCCGCACTGGATGCGGCCAAGGCGGCCTTGCCGGACGCCGGCAGGCTAGCCGAGTACGCCAAGAAGAGGCAGGCGGAGCGGGCCGCCGGCGAGGCTGCGAACAACTGAACTGGCAGGGGGCGTGGTTTGCGACGTGGTTGGGCCTCGACGATGAATTTGGTGTCATGGTGTGCCACTAGTAGTCCCGTCACATGTGGGCTTTGTTTGCTACGTGAAGTTGTTGTCTGTGTGCGTTCTTACGGTTGGATTGTCGTGTACTTTTGGTAAGCCCATTTCTTCCAATAAATGGAATTATTAGTTTTGAGAGGAACAAGAGTGAACATTTTTTTTTCAAAGATGACGAAAATTATTTACATCCTCGGCCTTTGCATAAGGAAAAGTGTGGTGGGACTAAATCGAACTGAAAGCCGAAAAAATCACACAAATTTTATAGAACTACTATTGGGAGCGCTGTGCGCTCCCATATTCCAAGCGTCCACCCCACGTCCCGTCATCCCGCTCTTACCGTTATCGGAGTAAACGATTTACTTCAATAAAAACAACTTCTCTGGCTACGATCCCACCCCACGTCCCGTCATCCCACTCCTACCGTTATCGGAGTAAACGATTTACTTCGATAATAAAAACAACTTCCCTTTCGATCCCACCCCACGTCCCACATCGTGCTCCCACCATTATCGGAGTAAATGATTTACTCCGATAAAAACAACTTCTCTACTTCTGGTATATATTCTATTTTTCCTGTACCCAACCAACCACTCTCGCCCCCACTTTATTTTTTCCCTTTTTTTTTCGGATCTGAATCGATCCACCATCCCAACCCACAGGATTGGCGACGCACCATGGAGGAGGAGGACGATACCGTGGCAATTGATGCGGTGGCCGGCAAGCGGGGGCTGGCGGCGCTTGAGGCGAAGGCACTGCTTCAAGCCTCGTTGCCGCAACATCTACTTCAGATCGATGCTGAAGAGACGTCTGGCCCATGGCGAACGAGGTGGACGTCGTGGGGACGGTGAGTTCTCTCAGCAATTTCTAATGAGATTATTGATTTCTTGCAAGAATTGTATACAATCTATGATTAATTAAATTCTTTATCCTTCTTGATTCTATGCAGTCTGACTTTGATTGGGTTGAAAACTCATCTTGGCGTGCTTCTCTATTCTCCCTTGCATGGCGGAGATCCTGTTTGTGATGGTCAATCGATTTGGTAACATCGGCAAGAAACTGTGATTTGTTTCATCACCTATGTCGTTGCCCAGTTTATGACAGTGAGGCGGTGACAACAGCAACGGCGATCTCCACCTTTGGCTCCGTCGCCGGATCCAGCTCCTTCCGAGGTCGCAGCGGCCAGACTTGGTACTGCCTCGGCTCTTGCATGCGTCTCTACCATTTTGTCTTCTTGCTCTCTCTAGTAGGATAGAAACTCCATTCAGCCGTCACGAGGAACTGGCGATGGCGTGTATTGCTGTGTTTGTGTGTAAAATTTTTATTCTTGTGCTTTTACTATGATGTGCATGTAAAATCTTTATTTTTTGTCCTGTGATTTAGGATGGAGTGATTCAATGTATAAGTAAAAAATTTATTCACGTATTATTTGGGGTAAACTAACTAGGCCCCAGTAACTCCCTCCTTATTTATTTTTCCTTTTTTTTCTTGCTTGATGCACTCACTATAAGAAATCATCAATCAAGGCTGGCAATAATACAATTACTACAAGTTAATGCACCATCAATTTTCATTTACATCGACAGTAATACGAAAATTACAAGATTTGATCAACCATTTTCATTTTTGTCAACAGTAACTTGATTACTACAAGATTTCACCAAGTATGGTTGTCGTTAATCCAATTACTACAGGCCCTTGCACCATCAATTTTCATTTACATCGATAGTAATTCGATTACTACAAGATTTGGTCTCGGTTTGTTGCACACCATATCGTAACTACCTCGATTGGAAAAAGAGATAAACCAATTACAACGATTATTTTCAACCGACCACCGATTTTACGGACTTGTAATTGATTTACCCTGAATTCAAATAGAAATGATCTAAACAGATCGAACGTGGGCAACCGAACACCAGTTTTTGTGGACTCTGGGCGCGATGTGCGGTGCTCAGAATAATATTCCGCGCTCTAGCGTTCGGAATAGCGCTACCGCAAATTTTAAGGATTTAGCCAATATATGTTAGCTACCTGAGCCAATTATTAAAAACATTTTGGTGTATTATTAAAATTGGAAGTGAATATGTCTCTTGCGTATTGCGAAAACAATATTTCTCTCGCTAAAATTTATTGAAATGGCTAGAAATCAAGTCCTTTTAAAGTGGCCACACGAGACAGTCGTGCCCTCTGCACTCGCCGTGTGCCCCCACTGTAAATGGCCTTACTGTGCCATTTCCTATGTTTCCTCTTTTATCTTCTCCAAGAAAGGGTGGAAGGCATGTCCAGATAGTTTTAGACTTTCTCGGTTGCTTATTGGAATGCTTTTAGAAAAGAAAGACAAATAAGTAACTTGTAGTTTGTAATTAAACAATTAGCCCGATCAAATGTGTCCACACGAATATTTCTGAGTATAGGTCTTTTTTTTCCTTTATTTAGTATTCTCTTTCTTTTTTTTTCAAACTTATTATTTGAATTCATTTTTAATTCATCAAGTGGGCCACGTGGATAGGGGAGCCATGGGAGGCGCGTTCGGCACAACAATTGTGTGCAGGTCCCAGTTGGTGAGGATCCTCTATCATTATTTTTTCATTTTTTGAGAATTTGGTTTTTTTTTCAACTTTGACCAAATTTTGTTAAAAATTCCAATAATTTTGGACTGAATTTTTTCAAAATTTTGGAAATTTCGCCATACCCCCCACCCCTGGATACAAATGCCAAAAACGAAATATTGAACCCTGATCCCCGCATTTTAAACAGCCCAAATTTGGCTAAACCATACCACACGGATTGGAGAATATTGGGGAAAAGTGAATCAACCGATTGTTATGGAGTTCCTTTACAGTCATCTCTATTGTAGTATTGCATCACAGTATAAATGATCCGAACCTATTGACAATTTCATCTTTTGATTATGTGGCCAACTATATATTAATAACTTTGGGGAATCCACATAAATGACACTTCCTCTAAATTTTAATATATGATGTTGTTTATTTTTTGACATATGTTTGACCGTTAGTCTTATTAAAAAATTTTGCGCAAATATGTGAAAATGTAAGTAATGAGTAAAGTATACTTAATGATAAAGCAAGTTACAATAAAATAAATAATAATTATGTAAGTTTTTAATAAGATAAATGGTGAAAAATCTGTAAAAGAAAATCAACAACATTATCATTTGTTTAGAACCTGAGGTAGTAAAATGGAACCTAGTCAACTTAATTCCCAAAACAGCAGAATCTATTCGTTTCTGAATAATCTCAGTCTGCATTCATCGATGACATCATGGGTGATGCATTGGCACGCCGCAGGCATCATGGATGATGCATCGATCACCCGCCACCCTCCACTTCAATCTGGAGCACCATATATACATCACCACCCTGCTCTGCTCAAGCATCCAAGAAGTACGCAGCAAAACACAATCCAAAAACGTGTTCATCCAATCATTCTCTCTTCCGCTCTCTCACCCCAGCGAGATGGCCGGATCAGGAGACGAGCTGATGCTGCTCGGCAAATGGCCGAGCCCATTCGTCACCAGGGTTGAGCTCGCGCTCGGCCTCAAGGGCCTCAGCTACGAGTACGTCAAGCAGGACCTCGTCAACAAGAGCGAGCTCCTCCTCGCCTCCAACCCGGTGCACAAGAAGATCCCCGTGCTCATCCACAACGGCAAGCCGGTCTGCGAGTCGTCGATCATCGTGCAGTACATTGACGAGGCCTTCCCCGACGCCGGCGCCAGCGCCGCCCTGCTCCCCGCCGACCCCTACGAGCGCGCCGTCGCTCGCTTCTGGGTCGCCTACGTCGACGACAAGGTAGGATAGCTTAGCTACCTTTCCTTCATTTGTGTCACAGTTCGAGCTGTTATCTCAAAACATAAATATTAGGGAATGATCTAATATCAAATAATTCGAAGGATGATGCTCTAAACCTAAATCGGCTAGCCCACCACCTTGTGAAACTAGCCAGAAAACTCCCGGACATTTCTCTCGAGGTTTTTATCTCACTGATGCGATGATGTGTTGGGTGGCGCGTGCGTGCAGTTCGTTCCGGCATGGGTGGCGACTTTCAGAGGCAAGACGGAGGAGGAGAAGGCGGAGGGGATGAAGCAACTGCTCGCGGCGGTGGAGACGCTGGAGGGAGCCCTGAAGGATTGCTCCAAGGGGAAGCCCTTCTTCGGCGGCGACACAGTCGGGATCGTGGACGTCGCGCTTGGTGGCCTCATCTCGTGGGTGAAAGCGACCGAGGTGCTCGCTGGCTCCAAGATCTTCGACGAGGAGAAGGCCCCTCTTTTGGCCGCGTGGGCGCAGCGCTTCGGCGAGCTCGACGTCGCCGAGAAGGTGTTGCCGGATGTCGACGGGGTGGTCGAGTTCGCTAAGATGAGGCTGGCAGAGGCAGCTGCGGCTGCCGCGGCGGCTTCAAAAAACTAA
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| CDS seq | ATGGCCGGAGCAGGAGATGAGCTGAAGCTGCTGGGCATGTGGACGAGCCCGTTCGCTCTTCGAGTGAAGCTTGCGCTCAGCTTCAAGGGCCTGAGCTACGAGTACGCCGAGGAGGACCTCAGCAACAAGAGCGAGCTGCTGCTCAGCTCCAACCCGGTGCACAAGAAGGTGCCCGTGCTCATCCACAACGGCAAGCCCATCTGCGAGTCGCAGGTCATCGTGCAGTACATCGACGAGGCCTTCCCCGGCGCCGGCGTGCCCCTCCTCCCCTCCGACCCCTACGAGCGCGCCGTCGCTCGCTTCTGGGCCGCCTACATCGACGACAAGCTGTTGAAGTCGTGGCTGCAGGCGTCGATGGGCAAGACGGAGGAGGAGAAGGCGGAGGCGTTGAAGGAGACGTTCGCGGCGGTGGCGAACCTGGAGGCGGCCTTCGAGGGGTGCTCCAAGGGGAAGCCCTTCTTCGGCGGCGACGCCGTCGGGTACCTGGACGTCACGCTCGGCGCCCTGGTCAGCTGGGTGCACGCCGGCGAGGCCCTGTACGGGATGAGGCTCTTCGATGCCACCAGGAGCCCGCTCCTGGACGCGTGGGTGGACCGCTTCGCCGCACTGGATGCGGCCAAGGCGGCCTTGCCGGACGCCGGCAGGCTAGCCGAGTACGCCAAGAAGAGGCAGGCGGAGCGGGCCGCCGGCGAGGCTGCGAACAACTGA
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| Protein seq | MAGAGDELKLLGMWTSPFALRVKLALSFKGLSYEYAEEDLSNKSELLLSSNPVHKKVPVLIHNGKPICESQVIVQYIDEAFPGAGVPLLPSDPYERAVARFWAAYIDDKLLKSWLQASMGKTEEEKAEALKETFAAVANLEAAFEGCSKGKPFFGGDAVGYLDVTLGALVSWVHAGEALYGMRLFDATRSPLLDAWVDRFAALDAAKAALPDAGRLAEYAKKRQAERAAGEAANN |
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| Function | Probable glutathione S-transferase GSTU6 [UniProtKB/Swiss-Prot:Q06398] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_10g0017610 | OsLima_10g0017610.02 | Chr10 | 22740489 | 22741597 | + | NAM | ||
| CDS seq | ATGGCCGGAGCAGGAGATGAGCTGAAGCTGCTGGGCATGTGGACGAGCCCGTTCGCTCTTCGAGTGAAGCTTGCGCTCAGCTTCAAGGGCCTGAGCTACGAGTACGCCGAGGAGGACCTCAGCAACAAGAGCGAGCTGCTGCTCAGCTCCAACCCGGTGCACAAGAAGGTGCCCGTGCTCATCCACAACGGCAAGCCCATCTGCGAGTCGCAGGTCATCGTGCAGTACATCGACGAGGCCTTCCCCGGCGCCGGCGTGCCCCTCCTCCCCTCCGACCCCTACGAGCGCGCCGTCGCTCGCTTCTGGGCCGCCTACATCGACGACAAGCTGTTGAAGTCGTGGCTGCAGGCGTCGATGGGCAAGACGGAGGAGGAGAAGGCGGAGGCGTTGAAGGAGACGTTCGCGGCGGTGGCGAACCTGGAGGCGGCCTTCGAGGGGTGCTCCAAGGGGAAGCCCTTCTTCGGCGGCGACGCCGTCGGGTACCTGGACGTCACGCTCGGCGCCCTGGTCAGCTGGGTGCACGCCGGCGAGGCCCTGTACGGGATGAGGCTCTTCGATGCCACCAGGAGCCCGCTCCTGGACGCGTGGGTGGACCGCTTCGCCGCACTGGATGCGGCCAAGGCGGCCTTGCCGGACGCCGGCAGGCTAGCCGAGTACGCCAAGAAGAGGCAGGCGGAGCGGGCCGCCGGCGAGGCTGCGAACAACTGA
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| Protein seq | MAGAGDELKLLGMWTSPFALRVKLALSFKGLSYEYAEEDLSNKSELLLSSNPVHKKVPVLIHNGKPICESQVIVQYIDEAFPGAGVPLLPSDPYERAVARFWAAYIDDKLLKSWLQASMGKTEEEKAEALKETFAAVANLEAAFEGCSKGKPFFGGDAVGYLDVTLGALVSWVHAGEALYGMRLFDATRSPLLDAWVDRFAALDAAKAALPDAGRLAEYAKKRQAERAAGEAANN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_10g0017610 | OsLima_10g0017610.03 | Chr10 | 22741420 | 22745864 | + | NAM | ||
| CDS seq | ATGGCCGGATCAGGAGACGAGCTGATGCTGCTCGGCAAATGGCCGAGCCCATTCGTCACCAGGGTTGAGCTCGCGCTCGGCCTCAAGGGCCTCAGCTACGAGTACGTCAAGCAGGACCTCGTCAACAAGAGCGAGCTCCTCCTCGCCTCCAACCCGGTGCACAAGAAGATCCCCGTGCTCATCCACAACGGCAAGCCGGTCTGCGAGTCGTCGATCATCGTGCAGTACATTGACGAGGCCTTCCCCGACGCCGGCGCCAGCGCCGCCCTGCTCCCCGCCGACCCCTACGAGCGCGCCGTCGCTCGCTTCTGGGTCGCCTACGTCGACGACAAGACGGAGGAGGAGAAGGCGGAGGGGATGAAGCAACTGCTCGCGGCGGTGGAGACGCTGGAGGGAGCCCTGAAGGATTGCTCCAAGGGGAAGCCCTTCTTCGGCGGCGACACAGTCGGGATCGTGGACGTCGCGCTTGGTGGCCTCATCTCGTGGGTGAAAGCGACCGAGGTGCTCGCTGGCTCCAAGATCTTCGACGAGGAGAAGGCCCCTCTTTTGGCCGCGTGGGCGCAGCGCTTCGGCGAGCTCGACGTCGCCGAGAAGGTGTTGCCGGATGTCGACGGGGTGGTCGAGTTCGCTAAGATGAGGCTGGCAGAGGCAGCTGCGGCTGCCGCGGCGGCTTCAAAAAACTAA
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| Protein seq | MAGSGDELMLLGKWPSPFVTRVELALGLKGLSYEYVKQDLVNKSELLLASNPVHKKIPVLIHNGKPVCESSIIVQYIDEAFPDAGASAALLPADPYERAVARFWVAYVDDKTEEEKAEGMKQLLAAVETLEGALKDCSKGKPFFGGDTVGIVDVALGGLISWVKATEVLAGSKIFDEEKAPLLAAWAQRFGELDVAEKVLPDVDGVVEFAKMRLAEAAAAAAAASKN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_10g0017610 | OsLima_10g0017610.01 | Chr10 | 22738245 | 22740526 | + | NAM | ||
| CDS seq | ATGGCCGGAGGAGACGAGCTGAAGCTGCTCGGCGCATTTCCAAGCGCATATGTCACCAGAGTGGAGCTGGCTCTCGGCTTCAAGGGCCTGAGCTACGAGTACGTCAAGGAGGACTTGGCCAACAAGAGCGAGCTCCTACTCAGCTCCAACCCGGTGCACAAGAAGGTCCCTGTGCTCATCCACAACGGCAAGCCCATCTCCGAGTCGCAGGTCATCTTGGAGTACATCGACGAGGCCTTCACCGGCGCCTCCCTACTCTCCAGGGACCCCTATGAGCGAGCCGTCGCTCGTTTCTGGGTTGCATACATCGACGACAAGGGAGGAGAAGGAGGGGTTGAAGCAGACGTTCGCGGCGGTAGAGCCCTGAAGGATAGCTCCAAGGGAAAGCCCTTTTTCGGTGGAGACACCGTTGGGCTCGTAGATATCACGCTTGGTAGCCTGATCGCATGGATGAAAGCAACTGAGGTGCTCACCGGTGCCAAGATCTTCGATCCGGCCAAGACTCCGCTCCTGGCTGCGTGGACGGAGCGCTTTGCCGAGCTCGACACCACCAAGAAGGTGCTACCGGACGTTGCCGGGTATGTCGAGTATGTCAACAAGAGGCGGCAGACACAGGCTGCCACAGCTGCCTTCACCACCAAGCTACACAGCTAG
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| Protein seq | MAGGDELKLLGAFPSAYVTRVELALGFKGLSYEYVKEDLANKSELLLSSNPVHKKVPVLIHNGKPISESQVILEYIDEAFTGASLLSRDPYERAVARFWVAYIDDKGGEGGVEADVRGGRALKDSSKGKPFFGGDTVGLVDITLGSLIAWMKATEVLTGAKIFDPAKTPLLAAWTERFAELDTTKKVLPDVAGYVEYVNKRRQTQAATAAFTTKLHS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_10g0017610 | OsLima_10g0017610.04 | Chr10 | 22740485 | 22741577 | + | IsoSeq | ||
| CDS seq | ATGAATTTGGTGTCATGGTGTGCCACTAGTAGTCCCGTCACATGTGGGCTTTGTTTGCTACGTGAAGTTGTTGTCTGTGTGCGTTCTTACGGTTGGATTGTCGTGTACTTT |
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| Protein seq | MNLVSWCATSSPVTCGLCLLREVVVCVRSYGWIVVYF |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.326005 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0528200 | SBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g38489 | SBH | 0.151580 | 0.155636 | 0.141495 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0528200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0017880 | SBH | 0.0 | 3.343572 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0018260 | SBH | 0.082561 | 0.000000 | 0.877274 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0017660 | RBH | 0.516216 | 8.552260 | 0.252772 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0018220 | RBH | 0.214889 | 0.184035 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0017940 | RBH | 1.095018 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0339500 | RBH | 0 | 2.479635 | 0.031769 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0017910 | RBH | 0.0 | 0.0 | 0.030000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0363600 | RBH | 12.4082375 | 6.310624 | 1.957056 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0017660 | SBH | 0.356700 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0017440 | SBH | 0.499272 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0018100 | RBH | 2.474508 | 47.908302 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0017660 | RBH | 0.578293 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0018160 | RBH | 0.000000 | 1.456585 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G017890 | SBH | 1.660139 | 16.673845 | 4.585860 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0017960 | SBH | 0.489945 | 0.0 | 0.0 |
