Basic Info
Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLima_02g0004520 OGI:02001240 | 16/16 LIMA | Os127564RS1 | Gramene(+IsoSeq) Chr02:3153619-3153804
Gene Symbol -
DNA seq

ttacagccccatcttcgttgcaggtgatgccttcccacaacagcagtccatgccattctgccatgacatggcgatgccaccgtcttgcgacagctcagcaatgaaccggaggagggagctcttctcctgctcgacgcaagccatggcggaggtggccacgatgagaagcagcagtagcgaggccat
CDS seq

atggcctcgctactgctgcttctcatcgtggccacctccgccatggcttgcgtcgagcaggagaagagctccctcctccggttcattgctgagctgtcgcaagacggtggcatcgccatgtcatggcagaatggcatggactgctgttgtgggaaggcatcacctgcaacgaagatggggctgtaa
Protein seq

MASLLLLLIVATSAMACVEQEKSSLLRFIAELSQDGGIAMSWQNGMDCCCGKASPATKMGL
Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLima_02g0004520 OsLima_02g0004520.01 Chr02 3153619 3153804 - NAM
CDS seq

atggcctcgctactgctgcttctcatcgtggccacctccgccatggcttgcgtcgagcaggagaagagctccctcctccggttcattgctgagctgtcgcaagacggtggcatcgccatgtcatggcagaatggcatggactgctgttgtgggaaggcatcacctgcaacgaagatggggctgtaa
Protein seq

MASLLLLLIVATSAMACVEQEKSSLLRFIAELSQDGGIAMSWQNGMDCCCGKASPATKMGL
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.000000 0.000000 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_02g0156200 SBH 0.250807 0.765182 1.044408
Nipponbare | IRGSP 1.0 | MSU LOC_Os02g06180 SBH 0.178056 0.515403 0.284927
Nipponbare | IRGSP 1.0 | RAP-db Os02g0156200 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_02g0004310 SBH 0.053326 2.659473 0.663938
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_02g0004510 SBH 0.087645 0.000000 0.391188
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_02g0004360 SBH 0.038443 0.407024 0.900679
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_02g0004250 RBH 0.061636 0.022630 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_02g0004280 SBH 1.714308 1.291915 1.010436
Minghui 63 | MH63RS3 | HZAU OsMH63_02G0052000 SBH 0.457674 0.8270825 1.2673805
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_02g0004280 SBH 0.048594 0.017924 0.096358
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_02G0054700 SBH 1.783247 2.5954695 5.951546
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_02g0004620 RBH 0.050025 0.093740 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_02g0004140 SBH 0.000000 0.691538 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_02g0004420 SBH 0.000000 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_02g0004370 SBH 0.114374 0.000000 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_02g0004290 SBH 0.032945 0.534010 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_02G004310 SBH 0.850914 0.737580 0.524094
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_02g0004260 SBH 0.000000 0.353235 0.384476
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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