Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsLiXu_11g0021300 | OGI:11072790 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr11:28652710-28656258 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | tacctcaccgtgtggttaggtatcacttgtaatccattcacgaaagaaatagaaagtaccagctgtaagtaactgtgttgttcatgctccatcagaagagttgaaaacaaatgtaaaaaggttatctggttgtcaaactcaatatctattgatctcagccttttattttcactatatttcttttgcactgtttgaaagactgaactggctgatagcagcagcaaatgaacttcaattctattacagagcagaaaagactcaaaccggtaaatggctttcaacaagtgcatggaccgacaaaaaagtgtcagggcttctgttttccctttggcacctatgtgctactattcattgaggcctgaatctcctccagagttttgccttttgtctctggcacgatcttcacaatgaaaaggatggccactgcgcaaactaatgcgaaaaggaagaatgtccctgcatgaaacagaatgtggtttatctccaaactcatgttacaaatttaacagtaaacttgaaaatgtgtacatttgaactgttccaggactatcctttgcacggttgtagtgaaagacggctaaagtcagcaaaacatgactagagatttggctcacctgaagaactccagctcatgaagaagttgaaggcaaaagaaactgcccatgaaccggaccagttcaccagagtcacaaagcttccaccgattccttttatatttatgggaaatatctgcatccaatacgaacaaacatgctaatgttacactgaattctggttctatttgatgaaatctttagtgaaggctgaaatctggtggttgaatgtttggcactttacctctgacattatgacccaagggactgcccccattcctattgaatagctagcaatgtacacctgtttcagttataaaaatggattttagcacaactgaactacagataaatttcgaaataatcaaacagaataaaaatttcaatgtaccaatatgccagcgagtgcgatgattggtacttgctccaagaaaagcccatgaatctacacaacaaataatgtgcttcaatttggtttacataacccaacaaagatgggtgcaaatcttcttgggggaaaatgcaaaataggcgtaaggattgagtgattttgtcaaatattaccttcaggtagaaggatactgctgacatgagagagccaattaggagtcctgatgttgaaatctggatagaaataaaaggaagtggttaagtgtgtttttcagtagtttctgctgcaacagttccccaagtgctgaaaatttgagtgcacttaccaacagcagtggccttctaccacttctgtccatcagtaatgctccaacagctgtgattggcgcctgttattaacagtatacagtcaaaacttttacttagaatttaaggaaaatttgatcaagttctgcacgtctattattttaacctggatacaccccatcaagattgttcctaggtctcctgaagcaaaccctgcataatgaaccaacaatttagtctgacatctctggaactgacaaaatctagtgttttgaagcgcgAaaaattgcgactttaccggctgatacaaaagtttcactggcatagaacaagattccattaattcctacaaactgctggaacaccatcaggccaacaccaacaatgacaggacggatgtaggctctgttgaaaagatcctgaactccagcctttggaaggttttcaatggtctcaatgaactcctgtatatattgaggaattactgataacaatcacaattttctgcaccataattgtatcttaaaatatactgttaacgatgtcgaaccttgatttctgaagcttcaatggacacatccgcatctttaccacggaggcgttggagcgctatttcaaactccttttgccgtccaacctttgcctgtgttttcaatttggtgctgaattgttagaatggaaattcagaatcaaatctaagtatattgttcaatgccttaccagccaccgaggggattcagtaatgaaggaaagaccaactataagaattatggacggtacaagtcctgtaaatgtgtcaaatacaaaaattatcactaccttgttgtaagttctacatgaccagatgatagtatgggatttttcctatgaatatacctgctatgaccaacatgcgccatgtcaccatagtaccgacaatataagtaacagataacccagtgcacaccagcaactgcagttgaaacgccaatttgatttcaaacactaatatgatatatctttctaaaaagtgttgcagcaccttcaggttgtttagtttttgttaagagtaaaattacttggttcagtgttgtaagccccccacgaagagctttcggagctatttctgctatgaaaaccggtacctgttcagttacaagagctgctgtcagtgaatctaaacaatatgttcagtgctcgaaagattaatatgttcagtaagtgatgtccttgattgatcattcataccacatatgaaaatactcctactccaaatccggtacagaatctcccaaaatcaagtgaaacagcaccctgaaaagttgtgaattcagttaagcagtttcttgacattcttgacttattgaagtataagattaagaaaacgtacttgtgcaaagaagattgcaagccatccgacaatgcaaacaagagcagaagtcctcattgcctgctccactcacaaaactttttggttaatgaattataactcttgatgaattctcacaaagattttaatagataaaagattattcaggcttgtagataccccttttcttccagaaatgtcagcaaggtgcccacttgcaactgctcctatcattgccccaattgttattattgatccgaaaaccgaatactgcggagaataacaggacaacatgatcaggaactgagaattacattgtcctccccttttgggaaacttgtacagaagtagaaattcagttgagaatggcattgcgacaaatttcagaaatactatttgagtgaagtagcgaaaatttcggcaacctcggagagcgagagctgaagatcctccctgatcttggactgagttggtgctgagtaaccaatctgcaagagaataatacaattaattcatgcacttgcaaattcagaagtaatttctgaatgaaatctccattatctaaaggaatgttgacaagtgtgtttcaatcctattctgatctttgaactcaccgagacgccgaagacgaaggagccgagcacggcaacgccggtgctggcgatgaccatggccagcgatccatcgccgccggcccggggaaggagggactcgcttgcaccactggacactcccatggcgatggccttagctgctaactgatgctaaccttcaacaagttcagttcttgcttgaactgaagctacaaccttgagctctgctactaagctgcatatatagtaagtggctttatgtaattaaccgtgtatgcaatgagtgattagagtgcttaacctcgatccttatgcatgt
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CDS seq | atgggagtgtccagtggtgcaagcgagtccctccttccccgggccggcggcgatggatcgctggccatggtcatcgccagcaccggcgttgccgtgctcggctccttcgtcttcggcgtctcgattggttactcagcaccaactcagtccaagatcagggaggatcttcagctctcgctctccgagtattcggttttcggatcaataataacaattggggcaatgataggagcagttgcaagtgggcaccttgctgacatttctggaagaaaaggggcaatgaggacttctgctcttgtttgcattgtcggatggcttgcaatcttctttgcacaaggtgctgtttcacttgattttgggagattctgtaccggatttggagtaggagtattttcatatgtgttgctggtgtgcactgggttatctgttacttatattgtcggtactatggtgacatggcgcatgttggtcatagcaggacttgtaccgtccataattcttatagttggtctttccttcattactgaatcccctcggtggctggcaaaggttggacggcaaaaggagtttgaaatagcgctccaacgcctccgtggtaaagatgcggatgtgtccattgaagcttcagaaatcaaggagttcattgagaccattgaaaaccttccaaaggctggagttcaggatcttttcaacagagcctacatccgtcctgtcattgttggtgttggcctgatggtgttccagcagtttgtaggaattaatggaatcttgttctatgccagtgaaacttttgtatcagccgggtttgcttcaggagacctaggaacaatcttgatggggtgtatccaggcgccaatcacagctgttggagcattactgatggacagaagtggtagaaggccactgctgttgatttcaacatcaggactcctaattggctctctcatgtcagcagtatccttctacctgaagattcatgggcttttcttggagcaagtaccaatcatcgcactcgctggcatattggtgtacattgctagctattcaataggaatgggggcagtcccttgggtcataatgtcagagatatttcccataaatataaaaggaatcggtggaagctttgtgactctggtgaactggtccggttcatgggcagtttcttttgccttcaacttcttcatgagctggagttcttcagggacattcttccttttcgcattagtttgcgcagtggccatccttttcattgtgaagatcgtgccagagacaaaaggcaaaactctggaggagattcaggcctcaatgaatagtagcacatag
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Protein seq | MGVSSGASESLLPRAGGDGSLAMVIASTGVAVLGSFVFGVSIGYSAPTQSKIREDLQLSLSEYSVFGSIITIGAMIGAVASGHLADISGRKGAMRTSALVCIVGWLAIFFAQGAVSLDFGRFCTGFGVGVFSYVLLVCTGLSVTYIVGTMVTWRMLVIAGLVPSIILIVGLSFITESPRWLAKVGRQKEFEIALQRLRGKDADVSIEASEIKEFIETIENLPKAGVQDLFNRAYIRPVIVGVGLMVFQQFVGINGILFYASETFVSAGFASGDLGTILMGCIQAPITAVGALLMDRSGRRPLLLISTSGLLIGSLMSAVSFYLKIHGLFLEQVPIIALAGILVYIASYSIGMGAVPWVIMSEIFPINIKGIGGSFVTLVNWSGSWAVSFAFNFFMSWSSSGTFFLFALVCAVAILFIVKIVPETKGKTLEEIQASMNSST |
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Function | Sugar transporter ERD6-like 16 [UniProtKB/Swiss-Prot:Q8LBI9] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLiXu_11g0021300 | OsLiXu_11g0021300.01 | Chr11 | 28652710 | 28656246 | - | NAM | ||
CDS seq | atgggagtgtccagtggtgcaagcgagtccctccttccccgggccggcggcgatggatcgctggccatggtcatcgccagcaccggcgttgccgtgctcggctccttcgtcttcggcgtctcgattggttactcagcaccaactcagtccaagatcagggaggatcttcagctctcgctctccgagtattcggttttcggatcaataataacaattggggcaatgataggagcagttgcaagtgggcaccttgctgacatttctggaagaaaaggggcaatgaggacttctgctcttgtttgcattgtcggatggcttgcaatcttctttgcacaaggtgctgtttcacttgattttgggagattctgtaccggatttggagtaggagtattttcatatgtgttgctggtgtgcactgggttatctgttacttatattgtcggtactatggtgacatggcgcatgttggtcatagcaggacttgtaccgtccataattcttatagttggtctttccttcattactgaatcccctcggtggctggcaaaggttggacggcaaaaggagtttgaaatagcgctccaacgcctccgtggtaaagatgcggatgtgtccattgaagcttcagaaatcaaggagttcattgagaccattgaaaaccttccaaaggctggagttcaggatcttttcaacagagcctacatccgtcctgtcattgttggtgttggcctgatggtgttccagcagtttgtaggaattaatggaatcttgttctatgccagtgaaacttttgtatcagccgggtttgcttcaggagacctaggaacaatcttgatggggtgtatccaggcgccaatcacagctgttggagcattactgatggacagaagtggtagaaggccactgctgttgatttcaacatcaggactcctaattggctctctcatgtcagcagtatccttctacctgaagattcatgggcttttcttggagcaagtaccaatcatcgcactcgctggcatattggtgtacattgctagctattcaataggaatgggggcagtcccttgggtcataatgtcagagatatttcccataaatataaaaggaatcggtggaagctttgtgactctggtgaactggtccggttcatgggcagtttcttttgccttcaacttcttcatgagctggagttcttcagggacattcttccttttcgcattagtttgcgcagtggccatccttttcattgtgaagatcgtgccagagacaaaaggcaaaactctggaggagattcaggcctcaatgaatagtagcacatag
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Protein seq | MGVSSGASESLLPRAGGDGSLAMVIASTGVAVLGSFVFGVSIGYSAPTQSKIREDLQLSLSEYSVFGSIITIGAMIGAVASGHLADISGRKGAMRTSALVCIVGWLAIFFAQGAVSLDFGRFCTGFGVGVFSYVLLVCTGLSVTYIVGTMVTWRMLVIAGLVPSIILIVGLSFITESPRWLAKVGRQKEFEIALQRLRGKDADVSIEASEIKEFIETIENLPKAGVQDLFNRAYIRPVIVGVGLMVFQQFVGINGILFYASETFVSAGFASGDLGTILMGCIQAPITAVGALLMDRSGRRPLLLISTSGLLIGSLMSAVSFYLKIHGLFLEQVPIIALAGILVYIASYSIGMGAVPWVIMSEIFPINIKGIGGSFVTLVNWSGSWAVSFAFNFFMSWSSSGTFFLFALVCAVAILFIVKIVPETKGKTLEEIQASMNSST
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLiXu_11g0021300 | OsLiXu_11g0021300.02 | Chr11 | 28652906 | 28656258 | - | IsoSeq | ||
CDS seq | atgggcagtttcttttgccttcaacttcttcatgagctggagttcttcagggacattcttccttttcgcattagtttgcgcagtggccatccttttcattgtgaagatcgtgccagagacaaaaggcaaaactctggaggagattcaggcctcaat |
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Protein seq | MGSFFCLQLLHELEFFRDILPFRISLRSGHPFHCEDRARDKRQNSGGDSGLN |
Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
SE | Chr11 | 28654950 | 28655226 | - | OsLiXu_11g0021300.02 | OsLiXu_11g0021300.02,OsLiXu_11g0021300.01 | All |
Expression
Leaf | Root | Panicle | |
FPKM | 0.000000 | 0.0 | 0.445266 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
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Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0643800 | RBH | 0.000000 | 0.000000 | 0.671158 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g42430 | RBH | 0.000000 | 0.000000 | 0.160854 |
Nipponbare | IRGSP 1.0 | RAP-db | Os11g0643800 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0021810 | RBH | 0.000000 | 2.657422 | 0.000000 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0021770 | RBH | 0.000000 | 6.187627 | 0.396078 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0021610 | RBH | 0.000000 | 52.686256 | 1.638911 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0021120 | RBH | 0.000000 | 5.718041 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0021620 | RBH | 0.000000 | 15.376167 | 5.527867 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0384200 | RBH | 0.4321295 | 3.7527035 | 2.59183 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0022190 | RBH | 0.000000 | 5.727972 | 0.711607 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0404300 | RBH | 0.0188 | 0.0149025 | 0.0467115 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0021960 | RBH | 0.000000 | 0.362798 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0022060 | RBH | 0.000000 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0021710 | RBH | 0.000000 | 50.172340 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0021470 | RBH | 0.000000 | 26.671761 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G021450 | RBH | 0.000000 | 38.581802 | 0.000000 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0022010 | RBH | 0.000000 | 59.110474 | 3.665853 |