Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_10g0017650 | OGI:10063030 | 11/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr10:22780256-22782971 | ||||||||
| Gene Symbol | GSTU25, OsGSTU25, GSTU26, OsGSTU26 | ||||||||||
| DNA seq | atactagagggagccctgaaggatacctcaaaggggaagccatttttcggcggcgataccgtcgggctcgtggatatcatgctaggtgccctgaactcgtggatgaaagcaaccgaggtgctcactggtgccaagatcttcgacccctctaagaccccactcctagccacgtgggcagtgcgcttcaacgagctcgatgctaccaaggaggtgctaccggacgtctatggagtggttgagtatgccaagatgaggcaggcagaggttgctgcagcagcttcagaaaactgatatagtaactctcgttgttttagacaataaccagtgaataatgtccctattcactacgccagatcctcatacctctgacggtatatctgtgacgggcttcagcattggtcaatgatgagggtcacctttgacgggtcctacgggataccgtcatcggtgaggcatccttctgcaacccgtcacaggtaactagtcatctgtgacggtccagtagtggaaaccgtcaaaggtgaggtaaatctcacctctgacggcttgcactgtcggtccgtcacaggtgactagttacctgtgacgggatgcatacttatatagaccgtcaaaagtgaggttaactcacctcaaacggcccgtccctagaggccgtcacaggtgtgggtgggaagactttgactagggttggactaatatatctctctccctcactctctctcccttatcctcactctctctctctctctctccctctcacgacttgcggcggcggcggaggacccgacggccctagctcgggcgaggcggcggcggtggtttggtgatgcgcggcggcggcggtggcgctgggcggcggctctggttcggcgacacgtgaggccgggctgcggctcagcggtgcgtggcggcggcggcggtgcggtggcgaagcggcgaggtggtgcggcggcgcgtggcagcggcgacgctgggcggtggctcagcgatgcgtggcggcggcgaggtggtgcggcggcggtacccccatcctcctcccccttctttctcccctcctcccccttcccgatccggtttttcttgcagcgaggtggttccaacggcgagcggcagttcggcggcctgcatcctcgaccgcgaggaggaggtgagcggcggcgccgcggcctcaatccccgtccgcctggcgccggatccgtcgtcctcaactgccgggcatcgtctcctccgtccgccggctgcgtccccaactgccgggtgcagatccgcccgtacgccgcttcccgggtgcagaaggcgaagagggcggcgtcgagcagcaatggggacgaggtcgcctccagaccgagctcaagaaggtccagcatgccaaggagttcaagcccatcgtggtatgattcgatctcaacttgtgatttgaacccagatctgatttctgcatccatctctctcgtggttattctggtgaatttgatctgattcgatttggttttgccttgcagattattcctcttgtgaaggcattgatcgagaaagacaaggaaggagagaagaagaagggcaccttcgttttttttTgttgctcgtcaggtgtttgatgaattgcttgcttgccatggctgttttatgtgtgatatgttcataaagacttttatctgtgatgaaatgttctagatttttgtgtgtgatgaatgcgatggcaactacccagaaatactttttttttgttttttttcatcggaatctacatcagtgacgggtgttgagctgtggttgtggctcttttttgctttttttttggggtgatttttcacatctgtgacgggtcacatgatacaactcgtcagaggggaatgacacctctgacggacctccacccgtcaaagatgacttgagtcatcagtgaccactgatctgtgacgagggggtgtatccgtcacagatgagagtttgagcccgtcactgctaacttgttctgctgtagtgattgctgataagtattccctagtcgttttagataagaatgagataaaactttaaaaattttgaactatatatgaatatttctcttagaaatatggagactatatatagattagtctttaaaaagtatttcaacataatcatatttattgatattttgatatatattaaatagaaaatagtggttaaagttattttttaagatcgtgttattatctaaaataataagtattatcaatctagaggatggagggaaggtttagtagtatctactagagaggactagttgattataatgcttgtgtcagtttcttgattcaatacagactaatgcaaggaatattcaaggaagattcatgccttctgttttgccctttactttaatatatgcagatcagaggtttttcaacttttgtgatagttttgttctttaactcgttgaagtgtctaacatttactagatttttctactctatttattaattccggtattatctaaaaacattttattgcggggcaaaaggaaatacccacatctctgccattgacgattcaactacagtgtgaaaggagaaaaagaattgcacaattccaaacttttagaattaggttggctgccgtgctgctgaaccaaagtataagagtttttttttttgctgtgcactagagttttttttttttttttgcactagagtttttgcaaggcttcaaatacacagaacaggcctaa
More
|
||||||||||
| CDS seq | atgctaggtgccctgaactcgtggatgaaagcaaccgaggtgctcactggtgccaagatcttcgacccctctaagaccccactcctagccacgtgggcagtgcgcttcaacgagctcgatgctaccaaggaggtgctaccggacgtctatggagtggttgagtatgccaagatgaggcaggcagagattattcctcttgtgaaggcattgatcgagaaagacaaggaaggagagaagaagaagggcaccttcatcagaggcttcaaatacacagaacaggcctaa |
||||||||||
| Protein seq | MLGALNSWMKATEVLTGAKIFDPSKTPLLATWAVRFNELDATKEVLPDVYGVVEYAKMRQAEIIPLVKALIEKDKEGEKKKGTFIRGFKYTEQA |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_10g0017650 | OsLiXu_10g0017650.01 | Chr10 | 22780256 | 22782971 | + | NAM | ||
| CDS seq | atgctaggtgccctgaactcgtggatgaaagcaaccgaggtgctcactggtgccaagatcttcgacccctctaagaccccactcctagccacgtgggcagtgcgcttcaacgagctcgatgctaccaaggaggtgctaccggacgtctatggagtggttgagtatgccaagatgaggcaggcagagattattcctcttgtgaaggcattgatcgagaaagacaaggaaggagagaagaagaagggcaccttcatcagaggcttcaaatacacagaacaggcctaa
More
|
|||||||
| Protein seq | MLGALNSWMKATEVLTGAKIFDPSKTPLLATWAVRFNELDATKEVLPDVYGVVEYAKMRQAEIIPLVKALIEKDKEGEKKKGTFIRGFKYTEQA |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0528300 | SBH | 0.802445 | 0.205732 | 0.566881 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g38640 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0528300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0017880 | SBH | 0.0 | 3.343572 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0018280 | SBH | 0.177354 | 1.454928 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0017660 | SBH | 0.516216 | 8.552260 | 0.252772 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0018190 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0017910 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0338400 | RBH | 2.7376345 | 8.689143 | 13.1095245 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0017810 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0362700 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0017600 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0017430 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0018140 | SBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0017700 | SBH | 0.0 | 0.0 | 0.072136 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0018130 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G017890 | SBH | 1.660139 | 16.673845 | 4.585860 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0017930 | RBH | 0.0 | 0.0 | 0.0 |
