Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLaMu_04g0028380 OGI:04095960 | 15/16 LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) Chr04:33810025-33819119
Gene Symbol NRPD2
DNA seq

gccagaacccttctcccccctcttcactctccccggaagcatcgctcgcacgcatcggacgccggaatccccgcctccggcgactagggtttcgccctccggcgacgcccctcctctccaccaggtacattccccctcccgtgtgacgggggctctggtgaggagccccgtccaacatccgcccccctcccctcaatcccctcctcctcccaccatttatttctcgcgggttgagagctccgtgtgctccggcgaggtggctcttccacgagggtcgtttacaccctgtcgcgagtgggttttcgatgggatgggaggaggagtagggtaggggagcatgcacgttttcatctgggtggctgggtgggtggattgcctaggtcggctcggtcggcgcggagtaggggaggagcaggggagaagccggagcacgtctcgtagatcgagattccggggtaggatgttgaggctgcggcgggggtcggaggcagagatcttcgaacgattttgttcctgatggtcatctccctcgccgctttattaagactggcgtatgttggtatcttgctggcaaacctaaccttgttgggttgctgaggccgctctactgcaatggcgtctatcagcaattaatccaaatctgtctttctgggatggaagggtgtgccaaatcgtccaattttttgtggatttattagtgatttgtttattcgaactcttgatgctgccagtacctttagttcctgtcatgtgatgattgagagctatggtgtaaattgtgtgacatattttgtgccaggatgagtgatggcctttaattctgttatttagcggagtagtacatattgagataattcttttttcgcttatacagttctgttaaacaaatcaagggtacagctactctgatttgttcctttgctagttttgtgtcacctagtgaatcttaggctgaatgcttcttttactgatgtgctgagtttgtaatacctatccttttaagaaaacactgtatgcgggcgagtgtatgtgcacacattgcgcgtgagtttacgtgtaccccatgcacgtaaattcaaggataaattccttttatatgactgaaagttaatccatttccttatttgccactcattctctcagtgccatgtgggtctagggcccacatgtcagtgagccataagacatcaatggcaattaaaggactctgtagaattttcagtggaaaaaggggatggccacaaagttcaaggatttctatttctagtgcttcaggggtgaacatgccaatgttcatgggtgttcgggtaaatactcacatgtttaggaaacagcgtgcatcaatccacaaggctctgctctgttggttaccaggcgtacacatctgtactgcaggttctgggtttgattcttggtttccagtcattcctattctttttttttgggggtggggccgcgcggggaaggggggtgacatcttttttcttcttgtttttttgttaggatttcaatagtttatttcatcctcgtattagtgctattgtgctaagtctcaatatggtatctctactatgaaaaatatttaatttaaTttttccattaatataatgatactagttatatgtttttattaaaccttgaatacccaacctgcacattctgcttctgccactgcttgaatgtttgctatctagttagatggtttttgtgatggtactgcactgtttgctaggctattccctcgaagttatggaagagccatcaaaggacaatgggcaatcatcctgtgttgttgatcctgagctggaacctatgatgctggatgatgctagagagggagtatcccatacattggatgatgcaaatgggcattcttctatggatgttgacagaggatgccattctatggacaccacgagatcatctctgggtgatgatggtaaaggaaagcgcgactcatatgcccaaattccagtcgacatgagtattccaagcctagaaaagttctgcaaagaagcatcaaggtccttctttgatgagattggtctgatcagccatcagataaattcttataacgagtttgtctcacatgggctccaggaactttttgattctctgggggaagtgactgtggagcctagttatgatccttcaaatagaggaccaggtggctggagacatgctatcatcaagtttggaagagtgcaactagaagaaccagtattttggtctcatggatgtgatattgatgaacaatcgctcaaactgaagccaaggcatgctcgcctacagaatatgacatattcttccaaaatgaaagtggaagttcatttccaggtcagggttcttattgttattttctacactaaatatttacttttatgccataatttgttgaatgccatgagcacaaacggtataagcaatgcaaaaaaaaaggtagctgtaaatgcttatatgtgctcagcataattcctttttctactttttgagcgctgtgtacaacacacaatcaattcctgttctcctacgcttagcttgtaaaagtgtgaacatcacgtgacaatttgtccatccaccgaacatcacctgaagaatatagaataaaatagtccacttataagcgtataacatgaaatggagcagtcaaggatcagatgggtgattagtgtttcttgagctgctccacagtcagcagcatgcactgttgaataatgtatggtactgtttcagtcatgcctgatcctattatcttaattgaactattatgccaatatatttgcctgttcctagtattattgtgcgctgatttgtctccctgatgcaaaacaaagctatgacgtgttggtgttccttagttttctttggtgttactataatctggtttactgaaatgttcttaaccgtgtcaggtttactctatggagaagagtgacaaggctaaaacagggaatgataaatttggttacaagcgaaacattattaatgaaacatattatataaatattggccgccttccagttatggttatgtcaaatttatgttggctccacaaactcaaggaaagtgattgccaatttgattctggtggatactttttgatcaagggaatggagaaggtaatactgtatattcatgtttctccttgccttatcattcagtgattatgtattgtgcctggtctccattctttcattatcatgtgttcaagcatttatttttgtatgctaggatgaactgcaaggttgtggggggaaattatatagtagaaacctctgcctaaatggaaagttggaaactcctactcaaaaagtaaaaaaaaaagagagaggaaaaactcacatgtagatatggtgattgttatccatgcaaaatatcaacatcaaacccaacatagtttgtgagatatgaaactggcaaataatgaaggaaaagtacttgtcctgatttttttttctttttcttcgctattgtcaatttcatatctcatagatagtcaaaatttgatcttgagatttcgtatggttgcctaatatgacctttcctttatgtgagtttctcttcctttttgaaatttttggataacctcgtggtttcctccaaagtttggaggaaaaccactactttataggaaaccaccaagtcatccaaagtagtggttttcactacagattttcctccaaattagttctgtagaatcatttcatttttttttgtttggcgttttagtatagtgtgtggacagctgaccatagccctaattattcgtagtgatctgttggagagtgattctcaatgtttaaaccctctgctggaaagaaagtttttgtaccatatatggcgtttttattttatatcactatgtttcatactatataaattttaaatgctgcaggtattcattgcgcaagagcaaaaatgtctgaccaggatttgggttgaggaccgtccttgctggatggtctctttcttgtctccaatcagaagaaggcgcatatatataaaactaattgattctgcaaataatgaagatgccagtggggggaagatcatttccatctcctttttgtatgcaaatatgccaatatggttgatgttttttgcactaggcatatcatcagataaggatatctttgatgttataaatatggaagactgtgatgcttgtgttatcaacacaattaccgcaactattaaagaatcagatgaattgtgtgaaggcttccgtaaatcagataaagcccggcagtatgttgacgaattgattaagaattcaaaatttcctcctgcagagccatttgatgattatattgctaaatacctcttccccagcataagtgggaaccggaacaaagcacttttcttaggttacatggtcaaatgccttttaatggctttcactgggaagcgcaaatgtgacaacaaggatgatttccggaacaagaggttggacctagctggtgaattgcttggaagagaactccgtgcgcatattaggcatgcagagagactcatggttaaggccttgcagagagatttaaatagtgagcgtgagttacaagaatttgatcattatctggatgcttcaattattaccaatggtctaaaccgtgccttctctactggttcttggtgccatccttacaaaagaaatgaaagatgcgcaggaattgttgcgacactaaggagaacaaatccgcttcagatgatctcggacttgaggaaaactcgccaacgagttgcttatgctgggaaagccggtgatgcaagatatccgtaagtatcttcttatgtttcatgcctatcttgtactatgatgtaaactgacttgaagAaaaaaatatttacagaaatccatcctactggggaaaattgtgttttatgtccactcctgatggtgaaaactgtggacttgtgaaaaatctagctgttacagctactgttagctccagagtagcaccgccattgattgacaggttcatttcttgtggaatgaataagctgcatgagattcctacagaggaggttcctagaatggacaaaatcttcctgaatggggattgggtggggtcctgtagtgacccggcttcatttgtcttgcgtttaaggtgcatgagacgcagtggtctgatagatccacaggtttgctctcatttcccatggcaagaagttttctgttggaaccttttttgagcattatgtcaatgattggtgtgctagtcccatagtcttcatcatgcctagttaggaagagtccctaattttgtttcataacctttttggaaaggtcaaactcaaatctgaatgcttagtaagtcattgacctgtattatcttacttctattcagcttgaataatgttgctttgaacgttatatttaggtaatcctgatttggactctatttaagttatgtattctatctggatgcatacacactgggatattggttcctgcatattttttccccttctgtgtagtatgtgctaccccctccgttgaataaataaagtgtatattgtgtctccaacataacaacttgacaatagttttatagcctgatgtaacaaaaggaaggaatatatggaaacatctatcaagacagataatgatatatttttatacagttttatgtgtttacttcctctgtcccaaaatatagcaacctaggactctgtctagatatgttgttctaggtggtgtcccatctagtcgttctatgttgctatattctgggacagagggagtaatatatattaatggcctctagatcccaagtaagttacattctggaacagagacataacgagggatactttacatgttgccactaatagtgtatctttttttaatgatccatttgattaggttgagataaaatgggacaagcaccaaagggaagttcgggtgttttctgatgcaggtcgaatcctcagaccgcttcttgtggttgaaaatctcaataaaattaggagaccgaagggcagttcatattcttttcagtggttaatgcaacaagaaataattgagtttattggcgttgaagaagaggaagatatacgaagtgcctggggcatcaggaacctatttgagagtgaagaagaggctcccatggtaaaaatgaataaagcagaggatgtcttcaatgttaagaggaagatcggaggggaggtttcaggttatacgcactgtgagctggatctttcttttctgctaggattaagttgtggtattatcccttttgcgaaccacaattttgctcggagggttctttaccaatctgaaaaacattcacagcaagctattggatactctacaacaaatccgcacatcagagttgataccctttcccatcaactttactatcctcagagaccccttttcaaaacagtgatagctgactgcattggtagatcagaatatacttttgggagaaaggatgactttgccagaccagagtatttcaatggccaaaatgcaatagtggcagtgaatgttcatcaggggtttaatcaagaagattccctggttatgaatagggcttctcttgagcggggtatgtttaggactgagcacttcaggaactataaggctgaagtagagaacaaaggtgggccaggtggcaacaaacgactaaaaatgaaggataagattgacttcggtaaaatgcaaagcaagagaggacgtgttgacaatcttgacgatgatggattaccatatgttggtgcaagtcttcagagtggtgacattgtcattggaaaggtctcagaatctggtgaagatcatagtattaagctgaagcatactgaaaagggtatggtgcagagggtattactttcagctaatgacgaggggaagaactttgcagttgttactctaagacaggtaatgatattgtttttattaaacatgtatcttctatccagcatattcatgatcctgacattggttgccagttgccactatattcatattatagtactcaacaatagaatgctgtcccttttgaaaatgtgcaatcaaacttttggactttccgagtgatgacataaaagagagattgtgtatatggtaaaaccattactagatctatcatgtacaacactttcattcaattatgccactaacatttagtaaattctaatagctaccagcattttcatagaaattggtttcagagtgcaattgtgcaatgtccaaactatatttgtggggagatcaagttatcgaatattggagtatcgtaatcattgccatacaggatgcttgcatgacttacttgatctggcagtccagatcctgcttatttccttattatttaatttcactgctaaacatgatttagtaattgcattgtcaactaggtgtcacctagtcgttgtcacatgactacatgagtcacccaagactagtgacttggcaatcttattctatcatatgTtttttctaatattttaggctgtaatatgatatttacattcactgagttctggtggccaaattaagttttgttaatatgatatttacattcactgagttcaggttcgatcaccttgccttggagataaattttccagcatgcatggccagaaaggtgtcgttggttttctagaatctcaggagaatttcccatttacttaccaaggaatagtaccagatattgtgataaatccacatgcatttcctacccgtcaaactccaggccagcttcttgaagctgctttggggaaaggaattgccctcggtggtacaatgagatatgctacaccattcacaacagcatcatttgatgtgattacagaccaattacacaagtaagtgtttcttctctaatggatgaattggtttctttcctaaattcactaaccaacctcttcacgcacattggtacaatagatgaaatgatttcggaggggcattatcgctcaaatctgttttttaactatgtggttacacacaaactgatattgtttgagctttcttgtaaatcttgttcgttattactgcaaagtgcacattgagcaaaaaaagacaaaaaacagtgcagttttacaagtgcgcaattcagcatcacttattcttgatatgttgatcaatcaggtcaatgtgtgcatgtcacctaaagtggcataaacaattgtttcagaaaatgtcttgtagtgaaacattactacaaactgatgtctcgttccatttcagggctggattttcgagatggggagctgaaagtgttctcaatggccggactggtgaaaggatgcactcattgattttcatgggtcctactttttaccagaggctgatacacatggcagaagataaggtcaagttcaggaacacggggccagtgcaccccctaacacggcaacctgttgctgacaggaagaggtttgggggagtgaagtttggagaaatggagcgtgactgcctcctcgcccatggtgcagcagccaacctccatgagcggctcttcatgcttagtgacttctcgcagatgcacgtctgccagacgtgcgaacgtgtggcgaatgttatcatgaggcctgtcccaggaggaaagaagatccgggggccatactgtgggttctgccgctcttctgaaaacatagtaaggatcaatgtgccctacggcgcaaagctgctctatcaagagctattcagcatggggatctgccttagatttgagacggaagtctgctagaactccacatctactatcgactcaccatgtatatatatcctcgttgtcccatggagattctgttatgggcattagtgttgtagtcacatgacttctcttccggttggacgatggcatagctaggaggggtgaatctgaagtcaggtgaaacctttcttttgctatttatttgggtgaagactcaattcccatcacctgcctttgatgtcctgtgaccaaccgatggcatagttagggatggggtgaatcagaggtcaactgaaaacccttttgctatagttcgatgtttcaccttggcactgtactatgcacatttggatgaaaactcatttcccatctcctgcttttgctgttctgtgatgaagcttatgcatgcatgcatgctttcgtgttttg

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CDS seq

atggaagagccatcaaaggacaatgggcaatcatcctgtgttgttgatcctgagctggaacctatgatgctggatgatgctagagagggagtatcccatacattggatgatgcaaatgggcattcttctatggatgttgacagaggatgccattctatggacaccacgagatcatctctgggtgatgatggtaaaggaaagcgcgactcatatgcccaaattccagtcgacatgagtattccaagcctagaaaagttctgcaaagaagcatcaaggtccttctttgatgagattggtctgatcagccatcagataaattcttataacgagtttgtctcacatgggctccaggaactttttgattctctgggggaagtgactgtggagcctagttatgatccttcaaatagaggaccaggtggctggagacatgctatcatcaagtttggaagagtgcaactagaagaaccagtattttggtctcatggatgtgatattgatgaacaatcgctcaaactgaagccaaggcatgctcgcctacagaatatgacatattcttccaaaatgaaagtggaagttcatttccaggtttactctatggagaagagtgacaaggctaaaacagggaatgataaatttggttacaagcgaaacattattaatgaaacatattatataaatattggccgccttccagttatggttatgtcaaatttatgttggctccacaaactcaaggaaagtgattgccaatttgattctggtggatactttttgatcaagggaatggagaaggtattcattgcgcaagagcaaaaatgtctgaccaggatttgggttgaggaccgtccttgctggatggtctctttcttgtctccaatcagaagaaggcgcatatatataaaactaattgattctgcaaataatgaagatgccagtggggggaagatcatttccatctcctttttgtatgcaaatatgccaatatggttgatgttttttgcactaggcatatcatcagataaggatatctttgatgttataaatatggaagactgtgatgcttgtgttatcaacacaattaccgcaactattaaagaatcagatgaattgtgtgaaggcttccgtaaatcagataaagcccggcagtatgttgacgaattgattaagaattcaaaatttcctcctgcagagccatttgatgattatattgctaaatacctcttccccagcataagtgggaaccggaacaaagcacttttcttaggttacatggtcaaatgccttttaatggctttcactgggaagcgcaaatgtgacaacaaggatgatttccggaacaagaggttggacctagctggtgaattgcttggaagagaactccgtgcgcatattaggcatgcagagagactcatggttaaggccttgcagagagatttaaatagtgagcgtgagttacaagaatttgatcattatctggatgcttcaattattaccaatggtctaaaccgtgccttctctactggttcttggtgccatccttacaaaagaaatgaaagatgcgcaggaattgttgcgacactaaggagaacaaatccgcttcagatgatctcggacttgaggaaaactcgccaacgagttgcttatgctgggaaagccggtgatgcaagatatccaaatccatcctactggggaaaattgtgttttatgtccactcctgatggtgaaaactgtggacttgtgaaaaatctagctgttacagctactgttagctccagagtagcaccgccattgattgacaggttcatttcttgtggaatgaataagctgcatgagattcctacagaggaggttcctagaatggacaaaatcttcctgaatggggattgggtggggtcctgtagtgacccggcttcatttgtcttgcgtttaaggtgcatgagacgcagtggtctgatagatccacaggttgagataaaatgggacaagcaccaaagggaagttcgggtgttttctgatgcaggtcgaatcctcagaccgcttcttgtggttgaaaatctcaataaaattaggagaccgaagggcagttcatattcttttcagtggttaatgcaacaagaaataattgagtttattggcgttgaagaagaggaagatatacgaagtgcctggggcatcaggaacctatttgagagtgaagaagaggctcccatggtaaaaatgaataaagcagaggatgtcttcaatgttaagaggaagatcggaggggaggtttcaggttatacgcactgtgagctggatctttcttttctgctaggattaagttgtggtattatcccttttgcgaaccacaattttgctcggagggttctttaccaatctgaaaaacattcacagcaagctattggatactctacaacaaatccgcacatcagagttgataccctttcccatcaactttactatcctcagagaccccttttcaaaacagtgatagctgactgcattggtagatcagaatatacttttgggagaaaggatgactttgccagaccagagtatttcaatggccaaaatgcaatagtggcagtgaatgttcatcaggggtttaatcaagaagattccctggttatgaatagggcttctcttgagcggggtatgtttaggactgagcacttcaggaactataaggctgaagtagagaacaaaggtgggccaggtggcaacaaacgactaaaaatgaaggataagattgacttcggtaaaatgcaaagcaagagaggacgtgttgacaatcttgacgatgatggattaccatatgttggtgcaagtcttcagagtggtgacattgtcattggaaaggtctcagaatctggtgaagatcatagtattaagctgaagcatactgaaaagggtatggtgcagagggtattactttcagctaatgacgaggggaagaactttgcagttgttactctaagacaggttcgatcaccttgccttggagataaattttccagcatgcatggccagaaaggtgtcgttggttttctagaatctcaggagaatttcccatttacttaccaaggaatagtaccagatattgtgataaatccacatgcatttcctacccgtcaaactccaggccagcttcttgaagctgctttggggaaaggaattgccctcggtggtacaatgagatatgctacaccattcacaacagcatcatttgatgtgattacagaccaattacacaaggctggattttcgagatggggagctgaaagtgttctcaatggccggactggtgaaaggatgcactcattgattttcatgggtcctactttttaccagaggctgatacacatggcagaagataaggtcaagttcaggaacacggggccagtgcaccccctaacacggcaacctgttgctgacaggaagaggtttgggggagtgaagtttggagaaatggagcgtgactgcctcctcgcccatggtgcagcagccaacctccatgagcggctcttcatgcttagtgacttctcgcagatgcacgtctgccagacgtgcgaacgtgtggcgaatgttatcatgaggcctgtcccaggaggaaagaagatccgggggccatactgtgggttctgccgctcttctgaaaacatagtaaggatcaatgtgccctacggcgcaaagctgctctatcaagagctattcagcatggggatctgccttagatttgagacggaagtctgctag

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Protein seq

MEEPSKDNGQSSCVVDPELEPMMLDDAREGVSHTLDDANGHSSMDVDRGCHSMDTTRSSLGDDGKGKRDSYAQIPVDMSIPSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPSNRGPGGWRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHFQVYSMEKSDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLKESDCQFDSGGYFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRRRIYIKLIDSANNEDASGGKIISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITATIKESDELCEGFRKSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLDASIITNGLNRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTATVSSRVAPPLIDRFISCGMNKLHEIPTEEVPRMDKIFLNGDWVGSCSDPASFVLRLRCMRRSGLIDPQVEIKWDKHQREVRVFSDAGRILRPLLVVENLNKIRRPKGSSYSFQWLMQQEIIEFIGVEEEEDIRSAWGIRNLFESEEEAPMVKMNKAEDVFNVKRKIGGEVSGYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCIGRSEYTFGRKDDFARPEYFNGQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEHFRNYKAEVENKGGPGGNKRLKMKDKIDFGKMQSKRGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQRVLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTYQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITDQLHKAGFSRWGAESVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGKKIRGPYCGFCRSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC

Function DNA-directed RNA polymerases IV and V subunit 2 [UniProtKB/Swiss-Prot:Q9LK40]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLaMu_04g0028380 OsLaMu_04g0028380.01 Chr04 33810025 33819119 + NAM
CDS seq

atggaagagccatcaaaggacaatgggcaatcatcctgtgttgttgatcctgagctggaacctatgatgctggatgatgctagagagggagtatcccatacattggatgatgcaaatgggcattcttctatggatgttgacagaggatgccattctatggacaccacgagatcatctctgggtgatgatggtaaaggaaagcgcgactcatatgcccaaattccagtcgacatgagtattccaagcctagaaaagttctgcaaagaagcatcaaggtccttctttgatgagattggtctgatcagccatcagataaattcttataacgagtttgtctcacatgggctccaggaactttttgattctctgggggaagtgactgtggagcctagttatgatccttcaaatagaggaccaggtggctggagacatgctatcatcaagtttggaagagtgcaactagaagaaccagtattttggtctcatggatgtgatattgatgaacaatcgctcaaactgaagccaaggcatgctcgcctacagaatatgacatattcttccaaaatgaaagtggaagttcatttccaggtttactctatggagaagagtgacaaggctaaaacagggaatgataaatttggttacaagcgaaacattattaatgaaacatattatataaatattggccgccttccagttatggttatgtcaaatttatgttggctccacaaactcaaggaaagtgattgccaatttgattctggtggatactttttgatcaagggaatggagaaggtattcattgcgcaagagcaaaaatgtctgaccaggatttgggttgaggaccgtccttgctggatggtctctttcttgtctccaatcagaagaaggcgcatatatataaaactaattgattctgcaaataatgaagatgccagtggggggaagatcatttccatctcctttttgtatgcaaatatgccaatatggttgatgttttttgcactaggcatatcatcagataaggatatctttgatgttataaatatggaagactgtgatgcttgtgttatcaacacaattaccgcaactattaaagaatcagatgaattgtgtgaaggcttccgtaaatcagataaagcccggcagtatgttgacgaattgattaagaattcaaaatttcctcctgcagagccatttgatgattatattgctaaatacctcttccccagcataagtgggaaccggaacaaagcacttttcttaggttacatggtcaaatgccttttaatggctttcactgggaagcgcaaatgtgacaacaaggatgatttccggaacaagaggttggacctagctggtgaattgcttggaagagaactccgtgcgcatattaggcatgcagagagactcatggttaaggccttgcagagagatttaaatagtgagcgtgagttacaagaatttgatcattatctggatgcttcaattattaccaatggtctaaaccgtgccttctctactggttcttggtgccatccttacaaaagaaatgaaagatgcgcaggaattgttgcgacactaaggagaacaaatccgcttcagatgatctcggacttgaggaaaactcgccaacgagttgcttatgctgggaaagccggtgatgcaagatatccaaatccatcctactggggaaaattgtgttttatgtccactcctgatggtgaaaactgtggacttgtgaaaaatctagctgttacagctactgttagctccagagtagcaccgccattgattgacaggttcatttcttgtggaatgaataagctgcatgagattcctacagaggaggttcctagaatggacaaaatcttcctgaatggggattgggtggggtcctgtagtgacccggcttcatttgtcttgcgtttaaggtgcatgagacgcagtggtctgatagatccacaggttgagataaaatgggacaagcaccaaagggaagttcgggtgttttctgatgcaggtcgaatcctcagaccgcttcttgtggttgaaaatctcaataaaattaggagaccgaagggcagttcatattcttttcagtggttaatgcaacaagaaataattgagtttattggcgttgaagaagaggaagatatacgaagtgcctggggcatcaggaacctatttgagagtgaagaagaggctcccatggtaaaaatgaataaagcagaggatgtcttcaatgttaagaggaagatcggaggggaggtttcaggttatacgcactgtgagctggatctttcttttctgctaggattaagttgtggtattatcccttttgcgaaccacaattttgctcggagggttctttaccaatctgaaaaacattcacagcaagctattggatactctacaacaaatccgcacatcagagttgataccctttcccatcaactttactatcctcagagaccccttttcaaaacagtgatagctgactgcattggtagatcagaatatacttttgggagaaaggatgactttgccagaccagagtatttcaatggccaaaatgcaatagtggcagtgaatgttcatcaggggtttaatcaagaagattccctggttatgaatagggcttctcttgagcggggtatgtttaggactgagcacttcaggaactataaggctgaagtagagaacaaaggtgggccaggtggcaacaaacgactaaaaatgaaggataagattgacttcggtaaaatgcaaagcaagagaggacgtgttgacaatcttgacgatgatggattaccatatgttggtgcaagtcttcagagtggtgacattgtcattggaaaggtctcagaatctggtgaagatcatagtattaagctgaagcatactgaaaagggtatggtgcagagggtattactttcagctaatgacgaggggaagaactttgcagttgttactctaagacaggttcgatcaccttgccttggagataaattttccagcatgcatggccagaaaggtgtcgttggttttctagaatctcaggagaatttcccatttacttaccaaggaatagtaccagatattgtgataaatccacatgcatttcctacccgtcaaactccaggccagcttcttgaagctgctttggggaaaggaattgccctcggtggtacaatgagatatgctacaccattcacaacagcatcatttgatgtgattacagaccaattacacaaggctggattttcgagatggggagctgaaagtgttctcaatggccggactggtgaaaggatgcactcattgattttcatgggtcctactttttaccagaggctgatacacatggcagaagataaggtcaagttcaggaacacggggccagtgcaccccctaacacggcaacctgttgctgacaggaagaggtttgggggagtgaagtttggagaaatggagcgtgactgcctcctcgcccatggtgcagcagccaacctccatgagcggctcttcatgcttagtgacttctcgcagatgcacgtctgccagacgtgcgaacgtgtggcgaatgttatcatgaggcctgtcccaggaggaaagaagatccgggggccatactgtgggttctgccgctcttctgaaaacatagtaaggatcaatgtgccctacggcgcaaagctgctctatcaagagctattcagcatggggatctgccttagatttgagacggaagtctgctag

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Protein seq

MEEPSKDNGQSSCVVDPELEPMMLDDAREGVSHTLDDANGHSSMDVDRGCHSMDTTRSSLGDDGKGKRDSYAQIPVDMSIPSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPSNRGPGGWRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHFQVYSMEKSDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLKESDCQFDSGGYFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRRRIYIKLIDSANNEDASGGKIISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITATIKESDELCEGFRKSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLDASIITNGLNRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTATVSSRVAPPLIDRFISCGMNKLHEIPTEEVPRMDKIFLNGDWVGSCSDPASFVLRLRCMRRSGLIDPQVEIKWDKHQREVRVFSDAGRILRPLLVVENLNKIRRPKGSSYSFQWLMQQEIIEFIGVEEEEDIRSAWGIRNLFESEEEAPMVKMNKAEDVFNVKRKIGGEVSGYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCIGRSEYTFGRKDDFARPEYFNGQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEHFRNYKAEVENKGGPGGNKRLKMKDKIDFGKMQSKRGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQRVLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTYQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITDQLHKAGFSRWGAESVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGKKIRGPYCGFCRSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.489595 9.118036 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_04g0641000 RBH 4.298502 5.198854 13.433597
Nipponbare | IRGSP 1.0 | MSU LOC_Os04g54840 RBH 1.779973 2.268236 2.267606
Nipponbare | IRGSP 1.0 | RAP-db Os04g0641000 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_04g0028360 RBH 1.629555 12.124836 9.767755
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_04g0029130 RBH 0.330753 3.953489 5.718728
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_04g0028710 RBH 1.963697 10.490947 16.629272
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_04g0028530 RBH 0.285605 0.348940 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_04g0028800 RBH 7.071681 17.975092 27.741297
Minghui 63 | MH63RS3 | HZAU OsMH63_04G0513700 RBH 8.0705715 18.349223 19.361082
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_04g0027440 RBH 0.329830 0.652586 1.691031
Zhenshan 97 | ZS97RS3 | HZAU NA NA NA NA NA
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_04g0027880 RBH 0.276123 0.266375 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_04g0027720 RBH 0.142288 15.765417 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_04g0027810 RBH 3.884577 15.635455 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_04g0028420 RBH 0.985671 1.848556 1.949934
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_08g0004680 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_04G027770 RBH 0.539661 4.370812 6.542580
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_04g0027630 RBH 2.025476 22.692162 13.403304
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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