Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_10g0018260 | OGI:10062680 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr10:23279492-23283064 | ||||||||
| Gene Symbol | GSTU12, OsGSTU12, OsGSTU6.2, GSTU6.2, GSTU24, OsGSTU24, GSTU3, OsGSTU3, OsGSTU29, GSTU29, Osgstu4, GST | ||||||||||
| DNA seq | cgtcTCCTtcggtccttcctcctcAAcaccaaccagacagaacagaggacaccgctcaCAAGcaaatacagagtcgagagtgagacttgaggcagaggccatggccggaggaggagacgagctgaagctgctgggcatgtgggcgagcccgtacgttctgcgagtgaagttcgcgctcagtctcaagggcctcagctacgagtacgtcgaggaggatctcatgaacaagagcgacctcctcctcagctccaaCccggtgaacaagaaggtgcccgtgctcatccacaacggcaagcccgtctgcgagtcgcaggtcatcctccagtacctcgacgaggcgttccccggcgccggcgccaccctcctccccgccgacccccacgaacgcgccgtcgctcgcttctgggccgccttcaacgacgacacggtacgtcggtaccatgtcacctcacatcgcgatcatccgcatcgtctccgactcttccgtttttgattcaatttgatttgttcgcagctggtggaggcgtcgcaggcggcgtcgtgggggaagacggaggaggagagggcggagggggagaagaaggtggtggaggcgctggagaagatggaggtcgggctgagggagtgctccaaggggaagcccttcttcggcggcgacaccgtcgggtacctcgacgtcgtgctcggcggcttcctcgcgtgggtgcgcgccaccgacgtgatgcgcggcgtcaagaggttcgacccggccaccaccccgctgctggcggcgtgggccgagcgcttcgtggagctggacgccgccaaggccgtcatgccggacatggacaagatgatcgagttcggcaaggtgctgcaggctcgcgccgccgccgccaccaactgaagtgacagttgacttgtcgtgtcatgccgaagacgaacggatgttgggattgtttccatctgtttcacagtcgagtgtcgtgtacgttacgagttcagatgtgttactacagtagtagtaCTTGGGTTGAAAAAATATCTAGGGAACAGTTTGTCCAAGGTAAAATGTTATAAACCGAAATGAATAGTGTTAATTAGAGAAAAGAAACTAGTACAAGTGGCGTCTGGGTGAGAAAGGTCTTTACAACTTAATAACATGGCCCAATGAAAATAATTACAGATTTGGCTGTGAAAAAAAAAGAGAGAAGACTATACTGTGCGGGACAATGAAAAGGTACACCAATAATATATTAGCGGTCATAATCTAATAACAATGCCTATTCGTAAATAAATTTTACCGGCATTAAAAAGAAGGTACCGAGAGATAATAAATTTGATACGTGGGATACTGAGAGGCATCAAATTTTACCAGAAAGGCTATTTCTCTTTGGTACCTTTTTAAGAGAGTATCGAACATTTTAAGATAAGTTTATGCATATGTATGCATTTAAAATAAAATTGTAACAATTATTGGGGAATGCTATACAGCACGAGATTGTGCTATTTCACTAGATATAGGCGTAAAAAAAATACATCCCCTAGAGGCAAaaaaagagctgtacaaaattacataagcgttgtggttaagttgggaggaattctccaagtcaccttgtgcctgccattattcaggttcttgactcttcctttatttttgccataaggttgggggctaccgtttccttgtgctcgaagatcctttagttcctttctttctagatttcttaggctatgagtaggattaaggatcgcagccctttcttgggcacttTCtttttgttggctagcatttcccaccattcatgtacgctttggcatggctcccaattgctcaggtccaattactgataagccacccagccgaccatcagtctccagatccttctggtgtatctaaaggaagctaataggtggcatgtcgtctcgttcgtcgtacggcatagggggcacactccgctatttggccatcctcttgtagctagtcgatcggaagtccagactctattttgaattacaagccacgcatagaatttgcattttgcaggagcccaagatttccaaattaggggattaaagTttgtgccgactattcctagacactgagccttgtatgccgaagaggccgagcattctccatgattcgagagcttccagacgatgtggtctgactcattttggttTAGtatgatgtcctgggttgcgCTccatagggacacaagttggctgatcaggtccactgtaaaagtagtgttcctatttagctccaggtcatcgatccaggtgtcattttcaatgccttcatgtagtgatttacttcttttcaatatgccttcgtttaattttttagaccaggttagcggatcacatgtttcaatacatctgaatatgggagcgcgcattcaacgagccacgcaatcagtatactagctaccccgtccacagaacacgaaccaaaaccatttatttaaccatctcaaatctcaaaacctcactcacacgattcacagttCACcaccaagctacagctagaagaagctaatggccggagcaggagatgagctgaagctgctGggcatgtggacgagcccgttcgctctgcgagtgaagcttgcgctcagcttcaagggcctgagctacgagtacgccgaggaggacctcagcaacaagagcgagctgctgctcagctccaacccggtgcacaagaaggtgcccgtgctcatccacaacggcaagcccatctgcgagtcgcaggtcatcgtgcagtacatcgacgaggcgttccccggcgccggcgtgcccctcctcccctccgacccctacgagcgcgccgtcgctcgcttctgggccgcctacatcgacgacaaggtgattcacaaattgcctcaaatcaatcgcaacgccctgtcttgaatttgcatcgaatcaataccaaatgacgatgtttctggtgattgattaactgtcaactgctgcgcttggtgcgtcgtcgcagctgttgaagtcgtggctgcaggcgtcgatgggcaagacggaggaggagaaggcggaggcgttgaaggagacgttcacagcggtggcgaacctggaggcggccttcgaggagtgctccaaggggaagcccttcttcggcggcgacgccgtcgggtacctggacgtcacgctcggcgccctggtcagctgggtgcacgccggcgaggccctgtacgggatgaggctcttcgatgccaccaggagcccgctcctggacgcgtgggtggaccgcttcgccgcactggatgcggccatggcggtcttgccggacgccggcacattagccgagtacgccaagaagaggcaggcggagcgggcagccgccgcggctgcgaacaactgaactggcatgcaggggccgtggttcgcgacgtggttgggcctcgacgatgaatttggtgtcatggtgtgccacttgtagtcccgtcacatgtggcgatgtgggctttgtttgccacgtgaatttgttgtctgtctgcgttcttacggttggatattgttcgtgtggttttggttagcccgtttcttccaataaatggaattattaatttttagagg
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| CDS seq | atggccggaggaggagacgagctgaagctgctgggcatgtgggcgagcccgtacgttctgcgagtgaagttcgcgctcagtctcaagggcctcagctacgagtacgtcgaggaggatctcatgaacaagagcgacctcctcctcagctccaaCccggtgaacaagaaggtgcccgtgctcatccacaacggcaagcccgtctgcgagtcgcaggtcatcctccagtacctcgacgaggcgttccccggcgccggcgccaccctcctccccgccgacccccacgaacgcgccgtcgctcgcttctgggccgccttcaacgacgacacgctggtggaggcgtcgcaggcggcgtcgtgggggaagacggaggaggagagggcggagggggagaagaaggtggtggaggcgctggagaagatggaggtcgggctgagggagtgctccaaggggaagcccttcttcggcggcgacaccgtcgggtacctcgacgtcgtgctcggcggcttcctcgcgtgggtgcgcgccaccgacaagaagctaatggccggagcaggagatgagctgaagctgctGggcatgtggacgagcccgttcgctctgcgagtgaagcttgcgctcagcttcaagggcctgagctacgagtacgccgaggaggacctcagcaacaagagcgagctgctgctcagctccaacccggtgcacaagaaggtgcccgtgctcatccacaacggcaagcccatctgcgagtcgcaggtcatcgtgcagtacatcgacgaggcgttccccggcgccggcgtgcccctcctcccctccgacccctacgagcgcgccgtcgctcgcttctgggccgcctacatcgacgacaagctgttgaagtcgtggctgcaggcgtcgatgggcaagacggaggaggagaaggcggaggcgttgaaggagacgttcacagcggtggcgaacctggaggcggccttcgaggagtgctccaaggggaagcccttcttcggcggcgacgccgtcgggtacctggacgtcacgctcggcgccctggtcagctgggtgcacgccggcgaggccctgtacgggatgaggctcttcgatgccaccaggagcccgctcctggacgcgtgggtggaccgcttcgccgcactggatgcggccatggcggtcttgccggacgccggcacattagccgagtacgccaagaagaggcaggcggagcgggcagccgccgcggctgcgaacaactga
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| Protein seq | MAGGGDELKLLGMWASPYVLRVKFALSLKGLSYEYVEEDLMNKSDLLLSSNPVNKKVPVLIHNGKPVCESQVILQYLDEAFPGAGATLLPADPHERAVARFWAAFNDDTLVEASQAASWGKTEEERAEGEKKVVEALEKMEVGLRECSKGKPFFGGDTVGYLDVVLGGFLAWVRATDKKLMAGAGDELKLLGMWTSPFALRVKLALSFKGLSYEYAEEDLSNKSELLLSSNPVHKKVPVLIHNGKPICESQVIVQYIDEAFPGAGVPLLPSDPYERAVARFWAAYIDDKLLKSWLQASMGKTEEEKAEALKETFTAVANLEAAFEECSKGKPFFGGDAVGYLDVTLGALVSWVHAGEALYGMRLFDATRSPLLDAWVDRFAALDAAMAVLPDAGTLAEYAKKRQAERAAAAAANN |
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| Function | Probable glutathione S-transferase GSTU6 [UniProtKB/Swiss-Prot:Q06398] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_10g0018260 | OsKeNa_10g0018260.02 | Chr10 | 23279516 | 23280687 | + | NAM | ||
| CDS seq | atggccggaggaggagacgagctgaagctgctgggcatgtgggcgagcccgtacgttctgcgagtgaagttcgcgctcagtctcaagggcctcagctacgagtacgtcgaggaggatctcatgaacaagagcgacctcctcctcagctccaaCccggtgaacaagaaggtgcccgtgctcatccacaacggcaagcccgtctgcgagtcgcaggtcatcctccagtacctcgacgaggcgttccccggcgccggcgccaccctcctccccgccgacccccacgaacgcgccgtcgctcgcttctgggccgccttcaacgacgacacgctggtggaggcgtcgcaggcggcgtcgtgggggaagacggaggaggagagggcggagggggagaagaaggtggtggaggcgctggagaagatggaggtcgggctgagggagtgctccaaggggaagcccttcttcggcggcgacaccgtcgggtacctcgacgtcgtgctcggcggcttcctcgcgtgggtgcgcgccaccgacgtgatgcgcggcgtcaagaggttcgacccggccaccaccccgctgctggcggcgtgggccgagcgcttcgtggagctggacgccgccaaggccgtcatgccggacatggacaagatgatcgagttcggcaaggtgctgcaggctcgcgccgccgccgccaccaac
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| Protein seq | MAGGGDELKLLGMWASPYVLRVKFALSLKGLSYEYVEEDLMNKSDLLLSSNPVNKKVPVLIHNGKPVCESQVILQYLDEAFPGAGATLLPADPHERAVARFWAAFNDDTLVEASQAASWGKTEEERAEGEKKVVEALEKMEVGLRECSKGKPFFGGDTVGYLDVVLGGFLAWVRATDVMRGVKRFDPATTPLLAAWAERFVELDAAKAVMPDMDKMIEFGKVLQARAAAATN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_10g0018260 | OsKeNa_10g0018260.03 | Chr10 | 23281954 | 23283064 | + | NAM | ||
| CDS seq | atggccggagcaggagatgagctgaagctgctGggcatgtggacgagcccgttcgctctgcgagtgaagcttgcgctcagcttcaagggcctgagctacgagtacgccgaggaggacctcagcaacaagagcgagctgctgctcagctccaacccggtgcacaagaaggtgcccgtgctcatccacaacggcaagcccatctgcgagtcgcaggtcatcgtgcagtacatcgacgaggcgttccccggcgccggcgtgcccctcctcccctccgacccctacgagcgcgccgtcgctcgcttctgggccgcctacatcgacgacaagctgttgaagtcgtggctgcaggcgtcgatgggcaagacggaggaggagaaggcggaggcgttgaaggagacgttcacagcggtggcgaacctggaggcggccttcgaggagtgctccaaggggaagcccttcttcggcggcgacgccgtcgggtacctggacgtcacgctcggcgccctggtcagctgggtgcacgccggcgaggccctgtacgggatgaggctcttcgatgccaccaggagcccgctcctggacgcgtgggtggaccgcttcgccgcactggatgcggccatggcggtcttgccggacgccggcacattagccgagtacgccaagaagaggcaggcggagcgggcagccgccgcggctgcgaacaactga
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| Protein seq | MAGAGDELKLLGMWTSPFALRVKLALSFKGLSYEYAEEDLSNKSELLLSSNPVHKKVPVLIHNGKPICESQVIVQYIDEAFPGAGVPLLPSDPYERAVARFWAAYIDDKLLKSWLQASMGKTEEEKAEALKETFTAVANLEAAFEECSKGKPFFGGDAVGYLDVTLGALVSWVHAGEALYGMRLFDATRSPLLDAWVDRFAALDAAMAVLPDAGTLAEYAKKRQAERAAAAAANN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_10g0018260 | OsKeNa_10g0018260.01 | Chr10 | 23279492 | 23283057 | + | NAM | ||
| CDS seq | atggccggaggaggagacgagctgaagctgctgggcatgtgggcgagcccgtacgttctgcgagtgaagttcgcgctcagtctcaagggcctcagctacgagtacgtcgaggaggatctcatgaacaagagcgacctcctcctcagctccaaCccggtgaacaagaaggtgcccgtgctcatccacaacggcaagcccgtctgcgagtcgcaggtcatcctccagtacctcgacgaggcgttccccggcgccggcgccaccctcctccccgccgacccccacgaacgcgccgtcgctcgcttctgggccgccttcaacgacgacacgctggtggaggcgtcgcaggcggcgtcgtgggggaagacggaggaggagagggcggagggggagaagaaggtggtggaggcgctggagaagatggaggtcgggctgagggagtgctccaaggggaagcccttcttcggcggcgacaccgtcgggtacctcgacgtcgtgctcggcggcttcctcgcgtgggtgcgcgccaccgacaagaagctaatggccggagcaggagatgagctgaagctgctGggcatgtggacgagcccgttcgctctgcgagtgaagcttgcgctcagcttcaagggcctgagctacgagtacgccgaggaggacctcagcaacaagagcgagctgctgctcagctccaacccggtgcacaagaaggtgcccgtgctcatccacaacggcaagcccatctgcgagtcgcaggtcatcgtgcagtacatcgacgaggcgttccccggcgccggcgtgcccctcctcccctccgacccctacgagcgcgccgtcgctcgcttctgggccgcctacatcgacgacaagctgttgaagtcgtggctgcaggcgtcgatgggcaagacggaggaggagaaggcggaggcgttgaaggagacgttcacagcggtggcgaacctggaggcggccttcgaggagtgctccaaggggaagcccttcttcggcggcgacgccgtcgggtacctggacgtcacgctcggcgccctggtcagctgggtgcacgccggcgaggccctgtacgggatgaggctcttcgatgccaccaggagcccgctcctggacgcgtgggtggaccgcttcgccgcactggatgcggccatggcggtcttgccggacgccggcacattagccgagtacgccaagaagaggcaggcggagcgggcagccgccgcggctgcgaacaactga
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| Protein seq | MAGGGDELKLLGMWASPYVLRVKFALSLKGLSYEYVEEDLMNKSDLLLSSNPVNKKVPVLIHNGKPVCESQVILQYLDEAFPGAGATLLPADPHERAVARFWAAFNDDTLVEASQAASWGKTEEERAEGEKKVVEALEKMEVGLRECSKGKPFFGGDTVGYLDVVLGGFLAWVRATDKKLMAGAGDELKLLGMWTSPFALRVKLALSFKGLSYEYAEEDLSNKSELLLSSNPVHKKVPVLIHNGKPICESQVIVQYIDEAFPGAGVPLLPSDPYERAVARFWAAYIDDKLLKSWLQASMGKTEEEKAEALKETFTAVANLEAAFEECSKGKPFFGGDAVGYLDVTLGALVSWVHAGEALYGMRLFDATRSPLLDAWVDRFAALDAAMAVLPDAGTLAEYAKKRQAERAAAAAANN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.082561 | 0.000000 | 0.877274 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0528400 | RBH | 1.312273 | 0.404266 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g38489 | RBH | 0.151580 | 0.155636 | 0.141495 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0528400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0017900 | RBH | 0.0 | 0.0 | 9.808242 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0018290 | RBH | 0.000000 | 9.005415 | 2.464998 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0017680 | RBH | 0.435518 | 0.0 | 0.658149 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0018220 | RBH | 0.214889 | 0.184035 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0017940 | SBH | 1.095018 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0338000 | RBH | 4.799373 | 12.1066375 | 71.3494495 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0017870 | RBH | 0.000000 | 2.388446 | 0.226359 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0363000 | RBH | 3.420261 | 12.82999 | 0.133035 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0017580 | RBH | 0.985270 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0017450 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0018060 | RBH | 10.665602 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0017660 | RBH | 0.578293 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0018190 | RBH | 0.0 | 2.067596 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G017840 | RBH | 0.703231 | 0.859461 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0017910 | RBH | 0.0 | 0.0 | 0.0 |
