Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_10g0018220 | OGI:01056340 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr10:23199442-23207462 | ||||||||
| Gene Symbol | AtpB | ||||||||||
| DNA seq | ctaaagggaaaaccgttcgagttgttcctgaatagcttccttcaaaaggatttccgcttcctcggtgaatgtcttgctagaagatataatttcttcgaattgaggtttagtatcTtttaggtgtttacgtaactcatccagaaatttctttacctgtccaatttctaaggaatcaagatatcctcttgttccgatataaatagtagctatctgctcttccactggaagaggatttgcttgggattgtttaagcaattctcgtaatcgtcggccccttgccaattgattctgacttgttttatcgagagcagaggcgaattgtgcaaaggcttgtaactccgcgaattgagctaattccaattttgatttgccagctacttgtttcatggctttaatttgagccgcggatcctactctggaaacggaaatacccacattaatagcaggccgaattccggcattgaatagatctgcggataagaatatttgtccatctgtaatggagattacattagtaggaatataggcggaaacgtctccagattgagtctcaactattggtaaagcagtcatacttccttcccctaaaagagaatttaatttagcggctctttctaaaaggcgtgaatgcaaataaaaaacatcccctgggtaagcttcgcggccggggggtcttcttaatagaagggacatttggcgataagcttgtgcctgtttggagagatcatcataaattattaaagtatgccgttcgcggtacataaaatactcagccagggctgctcccgtataaggagcgaggtattgtaatgtagcaggggaatccgccatttcagctactacaatagtgtattccatggccccctcttcatggaaagtagttactacttgagctacggaggatgctctttgaccgatagctacataaacacatattacatcttgccctttttgattgagaattgtatctgtagctactgctgttttgccggtttgtctgtccccaataattaactctcgctgaccgcgcccaataggaatcatcgaatcgatagcaataagccccgtttgaaggggttcatatacagaacgcctggaaattatacccggagcaggagattcaattaagcgagattccgaagctacaatttcgcctctcccatcaataggtttagccagagcatttataacacgacccaagtaagcctcgctcacgggtatctgagcaattcttcctgttgcttttacaaaactgccctcttgtatcatcaacccatcgcccattaatacaatcccaacatttttggattccaaattcagagcaatacccctagtcccttctgcaaattcgactaattcgcctgacattatttcaccaagacctataatacgagcaatcccatcccccacttgaactacgcgaccgatattctcaatccctacttttctattatattgttcaatacgttcgcggagaattttatgaatttcgtcgactcgaagggttgccattagtgtttctttactatttttttttcggaagcaaggggaaaaataatgcctaaattctaaaggaaagtagaagttcaaggcctaattaatttaactcttccattccatggccccgagaatgctaatattagcacgaatcgtacggaaatgtaactcggtattcaaacaactattcagagttcctagagctccttgtacggcttgttggaaaacccgttgtcggacctgattcatcgccctttgtttttcaaaataaagggtttcgtttttagacttttctaattgttccaaactaatagaagtggcattaatcaaatttgctttttctcgttctatctcagagtatccattcattcgatactcatccgcttctagttcgactttctgtaatcgaattcgagctttttcgagctgctcaatggttcctctacgcaattcttccgaatttcgaatagtactcaagatcctctgttttcgattatctaataaatcttttaatgaaagtagattaccttgctattaagtttacaacttttatgatctcttcccgaaccaaacatgaatctttcgattcatttggctctcacgctcccttttttctttttttgctatggctacttccattttttttaatgtaatgagcctatcctctaccctctcttttctgtttatatttcaatataccgaaacccatataagactagataaatattaagaggactcttccgcctagataaaaatctatcgtgggcagcaaagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaaaactaaatagaaaaatggaaaatgaaaatggatagaattcctacttttttcttcaaatccaaaaactttctccttttttatacataggtcgtcgattcggcattggataaaaagggcagggtgccccttctagtaaatagttcaaaccattttatcgatatgagtgttctatatcagataaattctacattagctatttcctgtttaaagcatttggtactaatactaatatagttgtagaaagagtacccccttttgcctagacttcaagcagtttagctttaaccgtttaatggtctcatattattggtctatagagaatcaaagttgatttgatttaccaataggtcgcgaaatgctatggttctttcatatgatttctgcatttattcagaagtaattcgtcgagatcgtgcacccttttcttatttattcgaaaaatactaaaaaatattctaaagtgcagccggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaataaatcaatacaccaaccactacagttagatttattagatttgttgctaaaatatcggtattaagcccgaaactcccagcggatggccagtgagctaaaaaaacgaaagaatgggttacatttttcatatgctctcctcttatagataggacgaacaaagaacaaagtttttcgatcacttacttcgctcgccctttttgatcggtttttttaatgcaattttttttaatagaaatagattcaatttagtaatttcttttagattaagtcttagatctcgtttgacctgtgaaagacctcctttgttgaaatgttcccaaaattcctaaaataaaaggaaaaatactttccactgccctaaacaaagggcgggaagcaagacggcgaacatatcctctaaattgatcatcctcaaatcagctattcctggggtggggtattgtctgtccccataaatagaaaactctaggagtaataaattaggagtaaagtattgatataattggaattgcagaagcaaataccaatttactaaaaagaagaaagtatctaatctaaaggactcgttttcttttttaggattaaacaaaagggttcgcaaataaagcgccagtgccacaactagtccataaattgttaaagcttccataaaagctagactaagcaataaagtaccgcgtattttaccttctgcttctggctgtctcgcaataccttctacagcttgtcctgcagcagtaccttgaccaactccaggcccaatagaagcaagacctacggccaatccagcagcaataacggaagcagcagcaattagtggattcatgatgagtttcctcgtgtcaaaaaaaagaaatggttaaggatacaatcaaccaagaaattcatatttctaagctctattggacagaagtaactaaaaagtacaaattgaaacgataatctgaattctccgaactgcttcgagatctcctttttagtttctaatcattagaggtttgtgtactcattattctatttctctttctttccaaccaactgatctttcattccatccttctttctttcctcttcgatatccttgagtttctattttttcccctatcatctaattcataataaaaggtgaaatagaggaagaacccctatggaaatcgacctaatccagatccaataggaattaaatcaagatatccaattgataacaatatgctgcatcgaattggatatggaatccgattccatatatcggattagataatgaatctaacttgggaatatataatatcccatatcaatttgtttcttctattttgtttgtgtattttctcattttctattgaatcggattcaaaaaaaattccttaaagtggaaacccatacaaaagatgactgaacttatagacataaaggatatagatctagcctgactccgcccctccctaatgcctatatactttgtttggcaattccgtaatatagcctattctctcttctacaactctagattgtatattcatacgcaattctaactattttgttttccaaccaagcgaattttccgcaaccatgcatgaattgagttaagctaaaaaaaagactattttgaaaactagtcaattcaatgatgaccctccatggattcacctatataggctgcggctaacgttgcaaaaataagagcttgaataccgcttgtaaataatccaagaaacatgaccggtataggaactactaaggggactaaagaaacaagaacaacaacgactaattcatccgccaatatattcccgaaaagtcgaaaactaagcgataatggttttgtgaaatcttctaatatgttaattggtaaaaggattggagttggtttaatatatttctcgaaataactcaatccttttttgctaagacccgcataaaatatgccgctgacgtgagtaaagctaaagcaacagtagtatttatatcattcgtgggcgctgctaattctccatggggtaactgtataattttccaaggtaaaagagcacccgaccagttcgaacaaataaaaaggaacatagttccaataaagggaacccagggaccgtattcttctccaatctgagttttgcttaagtctcgaataaactcaaggacatattcgaagaaattctgaccatcggttgggatggtttgtggattgcgaactgctatgataactgaacctagcaagatagtaattacgacccaagaagtgataagtacttgggcatgaatttggaaacctcctatttgccaatagaagtgttggcctacttctacgcccgatatatcgtataaccccttgagtgttttaatggaacacggtataatattcatattgtcccctgataaaaaatgaacttcaaaaaaagaattcttttgattcaaccatctttttctcaactcagcaacgtgaagtattaatcttatatttaggatatcaagaaatcacatcagatgataatatatatcaataccctctaatatatatcaatattccccgtcttttttctatgcaaaacaaaaagaatagtaagtgattccataaatctacgcagttgcccaagaattaactattcttcttaatcaatgatttcttatatagagagaacggccctcacaaattgcaaatactaatttgttaagaatcaatcgaattgaagtcatagtgtcatcgttggctggaatcgatatattcgcgagatctgggtcacaatttgtatcggctaaagaaatagtaggaatccccaaaatggcacattcccgaagagctatatactctttttgctgatcgaggacgatcacaatgtcaggcaacctcgtcatatatttgatcccgccgagatatctttgcaaggtagataattttctcttcaagattgccacatctctttttgggagatggtggaatttttccatcttttcttctgctcttaagtctctaaattgagaaagtctagttttagtaatcgaccaattcgttaacataccactgaaccactttttattaacataatgacaacgagcccttattgcagctgatgctactaaatccgctgctctttttttggtaccaacaattaagaagctttttccctgacttgctgcatcaaaaactaaatcacaagcttctgataaaaaacgggtggttctagcgagatttgtaatatgagtacctttacgctttgccgagatgtaaggggccattttaggattccatttcttaataccatgaccaaaatgaactcccgcttctatcatctctttcaaattgatgttccaatatcttcttgtcattttttccacacttccttttgattttttcttttttttcatcctacctttccattacgaaatttctttcttttcgaagattaagaaagagccgaaatagcttgaaataaataataattgttccgatggaaccttctacatggtataagcataaccttaatgaattaactaaacttctttttaaattaaaatAaaaatagaaaatctaacctcttagcgttctaaggtcaaaaatctagtttaaagtaaaaaatctgctttatgtatccttaaatcatataaatggggtaaatggtgattctgatgtctcatagaaattgtttgttacgtcagaatcagaagaaactaattctgtatggagaaacaaaatatctctcatttccgacgcaaatagtttttttttttgaatttcgaaataaaggttcttgttttgtgggtaacggtgcacaaatttttggtgtaaattgaatttgaattacatgtttgcatatttgtactacttaccatcttctataactttctgaatctgatatggaaaaacgaggggataccgggatagttaccttgtcatcgatgtactttgcccagaaccgctcgacggcgcggccgtaggggtcgcgggggagtatggacggggcgccattggaggccggccagacctcgtcgatgtactagacgatgatgagagactcggcgatgggcttgccgtggtggagcagcacggggatcttcttgtgcaccgggttggaccggagcagcagctcgctcttcttccccaccgtctcctgcaacatctcgtgctccacgcccttcagcttcagcgccaccaccacgcggttcatgaaggggctcgcccagccgcccaccacgcgcaccgccgccggatcgcctgaactgttagtcgacgacattttcgctatctgcttcttcttggtgcagtgaggaggttgctgctgatgttcatgtgtttatatatacgcaattatggagcgcttttcgcttactatattggaagcttcgacgaccacttacgtgcgtcgttgtgtgtgtcatatggtttatttttttctcggtggcgtgatgcttggagccttggactagtatattgggctgacgtctcttgatgtgttcccttttgtcatgtgaggaggattttctgtggttgctagcgatggaacaatttccacagccactagtcgttgagggcgtgtgacattgtctatccatgtaggtaaattgtgcgccgaggagagaggagggttggggaccatgtctacaccgggtttgcgcgcctccacttgataacgagagcctctttagagaatacaacaatgttgtttgaaaaaggggaagcgcatccgtgcatggccagaaagcagaaggaaggggggaagaacggtggccaacctgcagctcaccgccatcagcttcggatcgagaagccggagaggggcgcagaggtggtaaagtggcggtgaccctaaccctgaccccgatgacagtgccctcgCccCGCCCATATGCGTCTCCATCCGTGCCGTCAAGCTTTGCCTTCTTTGATCCGTGTAGGAGAAGCTCGCTGAAGAGGGGAGAGGAGCAGGGGTGCCATGTCCGAGCCAAATCCGCCCTAAGCTCACCATCCCATTCGACGACGACAACAGGAGCTTGCCCGCGGCAGTTGGGTGCGGCAGCAATTGGGTGCAGAGGTGGAGAAGCGGTGGTGCCCCGACCCTGACGGCGGTGCCCATGTCAGCCCACACCTCCTGATCCATGCCGTCGAGCTCCCGCTTCCCTCGCTCCTGCGCCGCCGACCTCCGCTGCTTCCGGGGAGCAAAGAAGTGGTGGTGTGCCAT
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| CDS seq | ATGGCACACCACCACTTCTTTGCTCCCCGGAAGCAGCGGAGGTCGGCGGCGCAGGAGCGAGGGAAGCGGGAGCTCGACGGCATGGATCAGGAGGTGTGGGCTGACATGGGCACCGCCGTCAGGGTCGGGGCACCACCGCTTCTCCACCTCTGCACCCAATTGCTGCCGCACCCAACTGCCGCGGGCAAGCTCCTGTTGTCGTCGTCGAATGGGATGcaacctcctcactgcaccaagaagaagcagatagcgaaaatgtcgtcgactaacagttcaggcgatccggcggcggtgcgcgtggtgggcggctgggcgagccccttcatgaaccgcgtggtggtggcgctgaagctgaagggcgtggagcacgagatgttgcaggagacggtggggaagaagagcgagctgctgctccggtccaacccggtgcacaagaagatccccgtgctgctccaccacggcaagcccatcgccgagtctctcatcatctacatcgacgaggtctggccggcctccaatggcgccccgtccatactcccccgcgacccctacggccgcgccgtcgagcggttctgggcaaagtacatcgatgacaagaggatcttgagtactattcgaaattcggaagaattgcgtagaggaaccattgagcagctcgaaaaagctcgaattcgattacagaaagtcgaactagaagcggatgagtatcgaatgaatggatactctgagatagaacgagaaaaagcaaatttgattaatgccacttctattagtttggaacaattagaaaagtctaaaaacgaaaccctttattttgaaaaacaaagggcgatgaatcaggtccgacaacgggttttccaacaagccgtacaaggagctctaggaactctgaatagttgtttgaataccgagttacatttccgtacgattcgtgctaatattagcattctcggggccatggaatggaagatcgacgaaattcataaaattctccgcgaacgtattgaacaatataatagaaaagtagggattgagaatatcggtcgcgtagttcaagtgggggatgggattgctcgtattataggtcttggtgaaataatgtcaggcgaattagtcgaatttgcagaagggactaggggtattgctctgaatttggaatccaaaaatgttgggattgtattaatgggcgatgggttgatgatacaagagggcagttttgtaaaagcaacaggaagaattgctcagatacccgtgagcgaggcttacttgggtcgtgttataaatgctctggctaaacctattgatgggagaggcgaaattgtagcttcggaatctcgcttaattgaatctcctgctccgggtataatttccaggcgttctgtatatgaaccccttcaaacggggcttattgctatcgattcgatgattcctattgggcgcggtcagcgagagttaattattggggacagacaaaccggcaaaacagcagtagctacagatacaattctcaatcaaaaagggcaagatgtaatatgtgtttatgtagctatcggtcaaagagcatcctccgtagctcaagtagtaactactttccatgaagagggggccatggaatacactattgtagtagctgaaatggcggattcccctgctacattacaatacctcgctccttatacgggagcagccctggctgagtattttatgtaccgcgaacggcatactttaataatttatgatgatctctccaaacaggcacaagcttatcgccaaatgtcccttctattaagaagaccccccggccgcgaagcttacccaggggatgttttttatttgcattcacgccttttagaaagagccgctaaattaaattctcttttaggggaaggaagtatgactgctttaccaatagttgagactcaatctggagacgtttccgcctatattcctactaatgtaatctccattacagatggacaaatattcttatccgcagatctattcaatgccggaattcggcctgctattaatgtgggtatttccgtttccagagtaggatccgcggctcaaattaaagccatgaaacaagtagctggcaaatcaaaattggaattagctcaattcgcggagttacaagcctttgcacaattcgcctctgctctcgataaaacaagtcagaatcaattggcaaggggccgacgattacgagaattgcttaaacaatcccaagcaaatcctcttccagtggaagagcagatagctactatttatatcggaacaagaggatatcttgattccttagaaattggacaggtaaagaaatttctggatgagttacgtaaacacctaaaAgatactaaacctcaattcgaagaaattatatcttctagcaagacattcaccgaggaagcggaaatccttttgaaggaagctattcaggaacaactcgaacggttttccctttag
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| Protein seq | MAHHHFFAPRKQRRSAAQERGKRELDGMDQEVWADMGTAVRVGAPPLLHLCTQLLPHPTAAGKLLLSSSNGMQPPHCTKKKQIAKMSSTNSSGDPAAVRVVGGWASPFMNRVVVALKLKGVEHEMLQETVGKKSELLLRSNPVHKKIPVLLHHGKPIAESLIIYIDEVWPASNGAPSILPRDPYGRAVERFWAKYIDDKRILSTIRNSEELRRGTIEQLEKARIRLQKVELEADEYRMNGYSEIEREKANLINATSISLEQLEKSKNETLYFEKQRAMNQVRQRVFQQAVQGALGTLNSCLNTELHFRTIRANISILGAMEWKIDEIHKILRERIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMSGELVEFAEGTRGIALNLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIVASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQKGQDVICVYVAIGQRASSVAQVVTTFHEEGAMEYTIVVAEMADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELQAFAQFASALDKTSQNQLARGRRLRELLKQSQANPLPVEEQIATIYIGTRGYLDSLEIGQVKKFLDELRKHLKDTKPQFEEIISSSKTFTEEAEILLKEAIQEQLERFSL |
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| Function | ATP synthase subunit alpha, chloroplastic [UniProtKB/Swiss-Prot:P0C2Z6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_10g0018220 | OsKeNa_10g0018220.01 | Chr10 | 23199442 | 23207462 | - | NAM | ||
| CDS seq | ATGGCACACCACCACTTCTTTGCTCCCCGGAAGCAGCGGAGGTCGGCGGCGCAGGAGCGAGGGAAGCGGGAGCTCGACGGCATGGATCAGGAGGTGTGGGCTGACATGGGCACCGCCGTCAGGGTCGGGGCACCACCGCTTCTCCACCTCTGCACCCAATTGCTGCCGCACCCAACTGCCGCGGGCAAGCTCCTGTTGTCGTCGTCGAATGGGATGcaacctcctcactgcaccaagaagaagcagatagcgaaaatgtcgtcgactaacagttcaggcgatccggcggcggtgcgcgtggtgggcggctgggcgagccccttcatgaaccgcgtggtggtggcgctgaagctgaagggcgtggagcacgagatgttgcaggagacggtggggaagaagagcgagctgctgctccggtccaacccggtgcacaagaagatccccgtgctgctccaccacggcaagcccatcgccgagtctctcatcatctacatcgacgaggtctggccggcctccaatggcgccccgtccatactcccccgcgacccctacggccgcgccgtcgagcggttctgggcaaagtacatcgatgacaagaggatcttgagtactattcgaaattcggaagaattgcgtagaggaaccattgagcagctcgaaaaagctcgaattcgattacagaaagtcgaactagaagcggatgagtatcgaatgaatggatactctgagatagaacgagaaaaagcaaatttgattaatgccacttctattagtttggaacaattagaaaagtctaaaaacgaaaccctttattttgaaaaacaaagggcgatgaatcaggtccgacaacgggttttccaacaagccgtacaaggagctctaggaactctgaatagttgtttgaataccgagttacatttccgtacgattcgtgctaatattagcattctcggggccatggaatggaagatcgacgaaattcataaaattctccgcgaacgtattgaacaatataatagaaaagtagggattgagaatatcggtcgcgtagttcaagtgggggatgggattgctcgtattataggtcttggtgaaataatgtcaggcgaattagtcgaatttgcagaagggactaggggtattgctctgaatttggaatccaaaaatgttgggattgtattaatgggcgatgggttgatgatacaagagggcagttttgtaaaagcaacaggaagaattgctcagatacccgtgagcgaggcttacttgggtcgtgttataaatgctctggctaaacctattgatgggagaggcgaaattgtagcttcggaatctcgcttaattgaatctcctgctccgggtataatttccaggcgttctgtatatgaaccccttcaaacggggcttattgctatcgattcgatgattcctattgggcgcggtcagcgagagttaattattggggacagacaaaccggcaaaacagcagtagctacagatacaattctcaatcaaaaagggcaagatgtaatatgtgtttatgtagctatcggtcaaagagcatcctccgtagctcaagtagtaactactttccatgaagagggggccatggaatacactattgtagtagctgaaatggcggattcccctgctacattacaatacctcgctccttatacgggagcagccctggctgagtattttatgtaccgcgaacggcatactttaataatttatgatgatctctccaaacaggcacaagcttatcgccaaatgtcccttctattaagaagaccccccggccgcgaagcttacccaggggatgttttttatttgcattcacgccttttagaaagagccgctaaattaaattctcttttaggggaaggaagtatgactgctttaccaatagttgagactcaatctggagacgtttccgcctatattcctactaatgtaatctccattacagatggacaaatattcttatccgcagatctattcaatgccggaattcggcctgctattaatgtgggtatttccgtttccagagtaggatccgcggctcaaattaaagccatgaaacaagtagctggcaaatcaaaattggaattagctcaattcgcggagttacaagcctttgcacaattcgcctctgctctcgataaaacaagtcagaatcaattggcaaggggccgacgattacgagaattgcttaaacaatcccaagcaaatcctcttccagtggaagagcagatagctactatttatatcggaacaagaggatatcttgattccttagaaattggacaggtaaagaaatttctggatgagttacgtaaacacctaaaAgatactaaacctcaattcgaagaaattatatcttctagcaagacattcaccgaggaagcggaaatccttttgaaggaagctattcaggaacaactcgaacggttttccctttag
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| Protein seq | MAHHHFFAPRKQRRSAAQERGKRELDGMDQEVWADMGTAVRVGAPPLLHLCTQLLPHPTAAGKLLLSSSNGMQPPHCTKKKQIAKMSSTNSSGDPAAVRVVGGWASPFMNRVVVALKLKGVEHEMLQETVGKKSELLLRSNPVHKKIPVLLHHGKPIAESLIIYIDEVWPASNGAPSILPRDPYGRAVERFWAKYIDDKRILSTIRNSEELRRGTIEQLEKARIRLQKVELEADEYRMNGYSEIEREKANLINATSISLEQLEKSKNETLYFEKQRAMNQVRQRVFQQAVQGALGTLNSCLNTELHFRTIRANISILGAMEWKIDEIHKILRERIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMSGELVEFAEGTRGIALNLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIVASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQKGQDVICVYVAIGQRASSVAQVVTTFHEEGAMEYTIVVAEMADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELQAFAQFASALDKTSQNQLARGRRLRELLKQSQANPLPVEEQIATIYIGTRGYLDSLEIGQVKKFLDELRKHLKDTKPQFEEIISSSKTFTEEAEILLKEAIQEQLERFSL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_10g0018220 | OsKeNa_10g0018220.02 | Chr10 | 23200979 | 23203248 | - | IsoSeq | ||
| CDS seq | ttcggagaattcagattatcgtttcaatttgtactttttagttacttctgtccaatagagcttagaaatatgaatttcttggttgattgtatccttaaccatttcttttttttgacacgaggaaactca |
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| Protein seq | FGEFRLSFQFVLFSYFCPIELRNMNFLVDCILNHFFFLTRGNS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 726.383789 | 85.930038 | 597.339661 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0525500 | SBH | 1.622879 | 0.284194 | 3.444963 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g38314 | SBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0525500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0006060 | RBH | 977.347717 | 246.369232 | 1538.183105 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0018180 | RBH | 0.000000 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0017650 | SBH | 0.0 | 0.000000 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0018180 | SBH | 0.000000 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0017920 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0337100 | SBH | 0.798253 | 48.3913495 | 0.0543705 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0017820 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0361500 | SBH | 0.8803995 | 46.223589 | 0.6636755 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0017590 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0017420 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0018070 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0017640 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0018140 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G017710 | RBH | 0.000000 | 0.000000 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0017940 | SBH | 0.0 | 0.0 | 0.0 |
