Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsKeNa_10g0008220 | OGI:10038500 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr10:13549463-13550476 | ||||||||
Gene Symbol | GSTU33, OsGSTU33 | ||||||||||
DNA seq | cattcaacctctaaccattttaagataacaaacggagattgcacaaagccaaaatgcaccacgtgcattgcagcattcctgtaagatgatgatgatgacgacagtgacgcattggaagatacattcgcctgtcctgacatcacggatgacgcaatccacccgcggacttcccactccagaacaaccatctcgatccagcacccgtctataactaaaaatccaatccgcccaacacgtgatcgctcgatcggcagaggcgcgacgacgatggccgccgccgccgccggaggaggaGgatcaccggatcacgagctgaagctgctcggcagcacgaaccctagcccgttcgtcaccagggtggagctcgccctcgccctgcgaggcctcacctacgacctcgtcgccgtcgacctcgaccgcaagaccgacctcctcctcgccgccaaccccgtccacgccaaggtccccgtcctcatccaccgcggccgccccgtctgcgagtcccgggtcatcctcgagtacatcgacgacgccttccccttccccggcGgcggcggcgccccgctcctcccccccgccgacgaccccctcgcccgcgccgccgcccgcttctgggccgcccacgtcgacgacgagttcgtggcgtcgtggaggccggcgtacctggggagcacggagggggagagggcggaggggatggcgcggatggccgccgcggtgggggcgctggagggggccctcgccgccgcggaggggaagcccttcttcggcggcgacgccccggggctcgtagacgtcacgctggggtcggtgatcccgcggacgagggcgaacgaggcgctcacggggaccagggtgctcgacgccgccaggacgccgctgctggcggcgtgggcggagcggttcggcgagctcgacgccgccaggaaggtgctcccggccgtcggcgacgtggtcgagtacctggagacgaggctccggaggagtaatgtggttatcgctaggaaacagtag
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CDS seq | atggccgccgccgccgccggaggaggaGgatcaccggatcacgagctgaagctgctcggcagcacgaaccctagcccgttcgtcaccagggtggagctcgccctcgccctgcgaggcctcacctacgacctcgtcgccgtcgacctcgaccgcaagaccgacctcctcctcgccgccaaccccgtccacgccaaggtccccgtcctcatccaccgcggccgccccgtctgcgagtcccgggtcatcctcgagtacatcgacgacgccttccccttccccggcGgcggcggcgccccgctcctcccccccgccgacgaccccctcgcccgcgccgccgcccgcttctgggccgcccacgtcgacgacgagttcgtggcgtcgtggaggccggcgtacctggggagcacggagggggagagggcggaggggatggcgcggatggccgccgcggtgggggcgctggagggggccctcgccgccgcggaggggaagcccttcttcggcggcgacgccccggggctcgtagacgtcacgctggggtcggtgatcccgcggacgagggcgaacgaggcgctcacggggaccagggtgctcgacgccgccaggacgccgctgctggcggcgtgggcggagcggttcggcgagctcgacgccgccaggaaggtgctcccggccgtcggcgacgtggtcgagtacctggagacgaggctccggaggagtaatgtggttatcgctaggaaacagtag
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Protein seq | MAAAAAGGGGSPDHELKLLGSTNPSPFVTRVELALALRGLTYDLVAVDLDRKTDLLLAANPVHAKVPVLIHRGRPVCESRVILEYIDDAFPFPGGGGAPLLPPADDPLARAAARFWAAHVDDEFVASWRPAYLGSTEGERAEGMARMAAAVGALEGALAAAEGKPFFGGDAPGLVDVTLGSVIPRTRANEALTGTRVLDAARTPLLAAWAERFGELDAARKVLPAVGDVVEYLETRLRRSNVVIARKQ |
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Function | Probable glutathione S-transferase GSTU6 [UniProtKB/Swiss-Prot:Q06398] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsKeNa_10g0008220 | OsKeNa_10g0008220.01 | Chr10 | 13549463 | 13550476 | + | NAM | ||
CDS seq | atggccgccgccgccgccggaggaggaGgatcaccggatcacgagctgaagctgctcggcagcacgaaccctagcccgttcgtcaccagggtggagctcgccctcgccctgcgaggcctcacctacgacctcgtcgccgtcgacctcgaccgcaagaccgacctcctcctcgccgccaaccccgtccacgccaaggtccccgtcctcatccaccgcggccgccccgtctgcgagtcccgggtcatcctcgagtacatcgacgacgccttccccttccccggcGgcggcggcgccccgctcctcccccccgccgacgaccccctcgcccgcgccgccgcccgcttctgggccgcccacgtcgacgacgagttcgtggcgtcgtggaggccggcgtacctggggagcacggagggggagagggcggaggggatggcgcggatggccgccgcggtgggggcgctggagggggccctcgccgccgcggaggggaagcccttcttcggcggcgacgccccggggctcgtagacgtcacgctggggtcggtgatcccgcggacgagggcgaacgaggcgctcacggggaccagggtgctcgacgccgccaggacgccgctgctggcggcgtgggcggagcggttcggcgagctcgacgccgccaggaaggtgctcccggccgtcggcgacgtggtcgagtacctggagacgaggctccggaggagtaatgtggttatcgctaggaaacagtag
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Protein seq | MAAAAAGGGGSPDHELKLLGSTNPSPFVTRVELALALRGLTYDLVAVDLDRKTDLLLAANPVHAKVPVLIHRGRPVCESRVILEYIDDAFPFPGGGGAPLLPPADDPLARAAARFWAAHVDDEFVASWRPAYLGSTEGERAEGMARMAAAVGALEGALAAAEGKPFFGGDAPGLVDVTLGSVIPRTRANEALTGTRVLDAARTPLLAAWAERFGELDAARKVLPAVGDVVEYLETRLRRSNVVIARKQ
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 2.005227 | 0.0 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0365200 | RBH | 0.0 | 0.0 | 0.693422 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g22070 | RBH | 0.0 | 0.0 | 0.146393 |
Nipponbare | IRGSP 1.0 | RAP-db | Os10g0365200 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0008170 | RBH | 0.0 | 2.220148 | 1.676319 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0008260 | RBH | 0.0 | 1.236097 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0008110 | RBH | 0.742108 | 0.982144 | 0.583345 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0008390 | RBH | 0.0 | 0.215930 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0008280 | RBH | 2.203863 | 10.892483 | 1.765700 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0198400 | RBH | 1.885728 | 4.44647 | 0.684737 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0008220 | RBH | 0.0 | 0.316366 | 0.426609 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0212100 | RBH | 2.518512 | 4.15756 | 0.995958 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0007960 | RBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0008040 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0008440 | RBH | 0.0 | 3.113530 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0007920 | RBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0008520 | RBH | 0.0 | 2.730520 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G008230 | RBH | 0.0 | 0.624461 | 0.0 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0008250 | RBH | 0.0 | 5.305531 | 0.586965 |