Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKYG_10g0017540 | OGI:10063110 | 16/16 | KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | Chr10:22715388-22716457 | ||||||||
| Gene Symbol | GSTU13, OsGSTU13 | ||||||||||
| DNA seq | AACACAACAATAGCACTGTATATCTGCAAATGATCGATGAATCAGAGAGCATACATATATATATACACACGCACGCATGCTCAGACTTTACATAATAGCCCCACAAATGAACTAAACAAGACTTCAAATGGCACTCTAATATAACGCACGGTTTTATCTTCACATGAACCCATCGATTTGATCCATCCGAAACGAATAATTATTCCAAGCCACTCAGGCAGCGGTGGAAGCCGCTGCTGCACGAGCCTGCAGCTTCTTGCCGAGCTCCACCGCCACACCAGCGTCCGGCACCACCCCCTTGGCCGCCTCGGCCTCCACGAACCGCTTCGCCCACGCCGCCAGGAGCGGGGTCTTGCCGGCGTCCAGCAGCGCCACGCCGAACAACCTGCGGAGCGCCTCGAACCAGTGCAGGTTGCTCCCGAGCACGAGGTCGACGTACCCGATGGAGTCGCCGCCGAAGAACGCCTTCCCGCCCGCGCACTCCGCGAACGCCTTCTCCAGTTGCGCCAACGCCGCCAGCGTCTCCTCGGCCTTCGCCGCCCTCTCCTCCTCCGTCGCCGCGAAAAGAACGCCAGCCATTCCAGGGAACATCTGCAAGACAACCAAGCTTATTACCAGCAGCTGCTCATCGAACAGCTTTGGAGACATGGCCATGGCCAGTACAGTGTACAGTACAGTACTCACGTTGTTGTCGACGTAGGCGGCCCAGAAGCGGGCGACGGCGCGGTCGTAGGGGTCGGCGGGGAGGACGGATGGCGCCGCGGCCCAGACCTCGTCGACGTACTGCACGATGACGAGCGACTCGGAGATGGGCTTGCCGCCGTGGATGAGCACGGGGACCTTCTTGTGCACCGGGTTGGAGGTGAGGAGGAGCTCGCTCTTGTTGAAGATGTCCTCCTCGACGTACTCGTAGCTCACGCCCTTGATGTTGAGCGCGATGCGCACGCGGATCGCGAACGGGCTCACCACCACGCCGAGCACCTTCACGTCGTCGTCTTTCCCCGCCATTGTTTTCTTCTCTTCCTTACCTCTCAGCTCGATGCTCTAGATGAGGTTTTGTGATGCAGTGC
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| CDS seq | ATGGCGGGGAAAGACGACGACGTGAAGGTGCTCGGCGTGGTGGTGAGCCCGTTCGCGATCCGCGTGCGCATCGCGCTCAACATCAAGGGCGTGAGCTACGAGTACGTCGAGGAGGACATCTTCAACAAGAGCGAGCTCCTCCTCACCTCCAACCCGGTGCACAAGAAGGTCCCCGTGCTCATCCACGGCGGCAAGCCCATCTCCGAGTCGCTCGTCATCGTGCAGTACGTCGACGAGGTCTGGGCCGCGGCGCCATCCGTCCTCCCCGCCGACCCCTACGACCGCGCCGTCGCCCGCTTCTGGGCCGCCTACGTCGACAACAACATGTTCCCTGGAATGGCTGGCGTTCTTTTCGCGGCGACGGAGGAGGAGAGGGCGGCGAAGGCCGAGGAGACGCTGGCGGCGTTGGCGCAACTGGAGAAGGCGTTCGCGGAGTGCGCGGGCGGGAAGGCGTTCTTCGGCGGCGACTCCATCGGGTACGTCGACCTCGTGCTCGGGAGCAACCTGCACTGGTTCGAGGCGCTCCGCAGGTTGTTCGGCGTGGCGCTGCTGGACGCCGGCAAGACCCCGCTCCTGGCGGCGTGGGCGAAGCGGTTCGTGGAGGCCGAGGCGGCCAAGGGGGTGGTGCCGGACGCTGGTGTGGCGGTGGAGCTCGGCAAGAAGCTGCAGGCTCGTGCAGCAGCGGCTTCCACCGCTGCCTGA
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| Protein seq | MAGKDDDVKVLGVVVSPFAIRVRIALNIKGVSYEYVEEDIFNKSELLLTSNPVHKKVPVLIHGGKPISESLVIVQYVDEVWAAAPSVLPADPYDRAVARFWAAYVDNNMFPGMAGVLFAATEEERAAKAEETLAALAQLEKAFAECAGGKAFFGGDSIGYVDLVLGSNLHWFEALRRLFGVALLDAGKTPLLAAWAKRFVEAEAAKGVVPDAGVAVELGKKLQARAAAASTAA |
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| Function | Probable glutathione S-transferase GSTU6 [UniProtKB/Swiss-Prot:Q06398] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKYG_10g0017540 | OsKYG_10g0017540.01 | Chr10 | 22715388 | 22716457 | - | NAM | ||
| CDS seq | ATGGCGGGGAAAGACGACGACGTGAAGGTGCTCGGCGTGGTGGTGAGCCCGTTCGCGATCCGCGTGCGCATCGCGCTCAACATCAAGGGCGTGAGCTACGAGTACGTCGAGGAGGACATCTTCAACAAGAGCGAGCTCCTCCTCACCTCCAACCCGGTGCACAAGAAGGTCCCCGTGCTCATCCACGGCGGCAAGCCCATCTCCGAGTCGCTCGTCATCGTGCAGTACGTCGACGAGGTCTGGGCCGCGGCGCCATCCGTCCTCCCCGCCGACCCCTACGACCGCGCCGTCGCCCGCTTCTGGGCCGCCTACGTCGACAACAACATGTTCCCTGGAATGGCTGGCGTTCTTTTCGCGGCGACGGAGGAGGAGAGGGCGGCGAAGGCCGAGGAGACGCTGGCGGCGTTGGCGCAACTGGAGAAGGCGTTCGCGGAGTGCGCGGGCGGGAAGGCGTTCTTCGGCGGCGACTCCATCGGGTACGTCGACCTCGTGCTCGGGAGCAACCTGCACTGGTTCGAGGCGCTCCGCAGGTTGTTCGGCGTGGCGCTGCTGGACGCCGGCAAGACCCCGCTCCTGGCGGCGTGGGCGAAGCGGTTCGTGGAGGCCGAGGCGGCCAAGGGGGTGGTGCCGGACGCTGGTGTGGCGGTGGAGCTCGGCAAGAAGCTGCAGGCTCGTGCAGCAGCGGCTTCCACCGCTGCCTGA
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| Protein seq | MAGKDDDVKVLGVVVSPFAIRVRIALNIKGVSYEYVEEDIFNKSELLLTSNPVHKKVPVLIHGGKPISESLVIVQYVDEVWAAAPSVLPADPYDRAVARFWAAYVDNNMFPGMAGVLFAATEEERAAKAEETLAALAQLEKAFAECAGGKAFFGGDSIGYVDLVLGSNLHWFEALRRLFGVALLDAGKTPLLAAWAKRFVEAEAAKGVVPDAGVAVELGKKLQARAAAASTAA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKYG_10g0017540 | OsKYG_10g0017540.02 | Chr10 | 22715388 | 22716455 | - | IsoSeq | ||
| CDS seq | ATGGGTTCATGTGAAGATAAAACCGTGCGTTATATTAGAGTGCCATTTGAAGTCTTGTTTAGTTCATTTGTGGGGCTATTATGTAAA |
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| Protein seq | MGSCEDKTVRYIRVPFEVLFSSFVGLLCK |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.511149 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0530500 | RBH | 12.227011 | 7.815253 | 10.305145 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g38710 | RBH | 8.068602 | 4.858023 | 2.450484 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0530500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0017980 | RBH | 0.000000 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0018360 | RBH | 2.080694 | 0.0 | 2.406996 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0017750 | RBH | 1.681978 | 0.0 | 5.684092 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0018300 | RBH | 0.066898 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0018050 | RBH | 11.185562 | 0.0 | 14.731965 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0339900 | RBH | 38.981651 | 0.01591 | 0.4936515 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0017950 | RBH | 0.271785 | 0.0 | 3.047350 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0364200 | RBH | 80.8090685 | 0.0242465 | 0.71109 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0017700 | RBH | 2.436012 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0017530 | RBH | 5.192924 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0018180 | RBH | 13.678863 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0017740 | RBH | 3.705521 | 0.0 | 3.471716 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0018270 | RBH | 2.243663 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G017890 | SBH | 1.660139 | 16.673845 | 4.585860 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0018060 | RBH | 0.486435 | 0.0 | 4.785773 |
