Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKYG_10g0004060 | OGI:06052220 | 2/16 | KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | Chr10:5660694-5664489 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGCGAAAAGGAGGAGGAAGTAGGGATGGCACACCTGTGAATGACTATGAAAGGAGGAGGGATCAAAATGTTGCTGAGAACAAGCGCATGATACAAGTTCTAAATCTAGAATCTATGCTAAAGTCTATAAGGACTGAAGGAGCTAGCTCTTCACAGCAAGCTAAGAAAACTAGCAAGGTATGCTGATATGTTTTTATTTTTTTTTGTGATGCATTGCTATTAACAAAATCATAGTGGTTTAACAAGTATTTTGATATTGTAGAAGAGAAAATGCATTAGCTCTGTGCCAATCGAACCTCGAAATCTACGCCCCAGACTAGCAAGAATTGATACAACAAATGAGCATGTAGGACATAGTGATCTGCACCCTAGGCTACCAAGAAATGGAAGTACTAATGGTCCTGAAGGACAAGATGAAGGTCCTCAACCTGTGGCTGCTGAACAGAATGGGGGTATGGTTTTCTTTTATTTTTATAAATATGAGCAATTCATATATTTGATTGACTAATTAACTGACTTGCAAATTTCAGATTCCAACAGAGCACAACCAAAGAAACGAGAAGGAAGAAAATTCACTAGAAAGGATAACATATGGTTTAGAGAAGAAGACGAGCCACTGATCAAGATGGAGTTCAACGAATTTGATCAGCCAATAGGGAAAGCTGCTAAAGAGTTTCCACATGTTGTTGGTACACTTGTAAGAACTAAGGGTTTCCCTCTCAATCATGATGACTGGAGACATGTTGATGAAGATTCGAAGCAGTTCATTATCGATGCTTTGGAGGTATGACAACTAATATATTTGTTCTATTATCGTGCTCACAATCAAGACTTTTGACCTAATCAAGACTTTTTTTCTTTATACAGATGCCCTTGTTTTATTATAATAATGTAGCTCCTGTTATTCTCTGCTCTTAGCTAAGCTTTTATGTGCTATATGTCTAGGTGTAGGAACTGATTTTGGATTATTCTTTTGACCTAATGGATGTAACCTTTCTTGGCATAGTGCGTATATGAGATGGATGAACGGCTTGAAAATTATTCTTTGGCTACTGCTGCGAAGAAGTGGAAGGATTACAAAGCTGATCTAAAGAAAGCCCATTTTAATGAGACAAAGACTGAGGAGGAACTTATTGCAGCTTGTGATAAAAGAGTGCTACCTGAACATTGGGAGTGGCTTGTCCATCATTGGCTATCACCAGAAGCACAGGTACACTGATGATTAAATCATTAATTGTTTTCCTTGTTGTTTGTTTAATTAAATTTATTTTTGAAGGCTCGTAGCTTAAGAGGCAAAATGAATCGTGGCAAGGTATTAACTCCACATACCTCTGGTAGCATGACATTTGCTCGTGCCCGACATGAATGGGTAAATTTATCAAACAATTTTTTTTGCTAGTATTCACTCCATTTGTGCCTTTTTGTCACTAGACTGTTTCGATGAATGCCGTTTGTGGAACATGGTTACAAGCCACGCAGAGATGAGATGTATATCAAAACCCATACACGTAAAAATGGGACTCCATTGACACAAGCTGCAGAGAGTATTGTAAGCTAGTCCAACTTTACATCTATATTCATTCATATTTTTTTGCTGCTAAAATTGGTTCTGTTCTAGAGAAAACTTCAAGAAGCAACCACAAAGTATCCAGAATTGAGAGAGAAAACTGTGCAGGAAGGTGATGTTTTCTCTCATGTATTTGGACGTGAGCCAAGGGGGTATGTTCGCTCTATTGGTTTAGGACCTACACCCTCTACTTTGGGCATTCATGGGCATCGCAAATATACTCCAACAAAGGTTCAAATGGCAATTCGTGGTCGACAAAAAGCTGAGCAAGAGGTCACAATGCTTAAAGGAACTGTGGACGAGCTACGGGATGAGATTGTAGAGTTGAAGCGGATGTTCTATGCTAGTCAAGGAAGAGAAACTACACCAAATGTTGGGAGTCCTCTTGAACGTGGTTCCAATCCTACACCCAGCAAGGATAGTGTGGATGTAAGTGAGGCTGAGTATGACCAAGAAATGAATAACCACGAAGTGAGAAACCATGACTACAGGCGGCATGTAAGCAACAGTCTCTAACGGTGCTCTTTTCTCACTTTGAATATTCTTTTATAAACAATCTGCTATATTGTTGTAGGTCAACCAACAAGTGAGTGACCAAGAACTGAGCAGCCACGCTTATAGGCAGAAGGTATGCAACATTAGCTATTGGCTTATTTTTCATCTTTTCATATAGATCTTACTGAAAAAAGTGACAAACTTTAAAAATGTGTAGTTACCACGTAGGAGAGCTGCGATCCCCGAAGGAAGACATGATGGGGTATAACTTCTTAGATATTCTTGCTGTCAATGTTTATGTTTTGGCCCCAGCCTAATAAATTTAGACTCGTCCTACTTTACAATGTTTCTGTTTTTGGTTTCGATCTAATAAATTACTTGTTATATTCTTCTCTAAACCTTGTGCCACATCATTGTAGGTTGATCAACAAGTGAGTGATCATGAAGTTAGCAACCATGCTTACAGGCAATAGGTATGCAACACTTTGCTATTGGTTCTAGATTGTTTTTATGTGTTTTATGTCGGACTAAGTAAAAAATGGTGACACTTAACTCTATGAATGTGTAGTTACCACGTAAGACAGTTGCAGTCCCAGAAAGAAGAAATATGGGGGTATAATTTCTTACAAAGTCCTTATGTTAATATCTATGTTTCAGCTTTAGTTTGATAAATAAATTGTAGTCCTACTTTTGTGAAAACCGTGTTATATTGTTGTAGGGTGGCCAAGAAGTCACACTTCTTTCTCTTGTGGCTCCATACAATCTTCCTGTGGCGAAGGCTACTGTGCAAACAAGTAACCCCGGCACATTGGTGGGTGGAACTGCTCTTGGTCCAAGATTCTATGAAGTGGTTGTGAACTCAGTCATTAAAAGGGATGTAGTGCTTCCTCGTCCATATGGGAGCATACAAACAATGGCAAATGCTTTCGGGCGATCAATTGCTTGGCCACGTACTCATGTAATGTATAGGCTAAATTATTTGTGTTTTTACCTATGTGTGATCTGCATATATACTACTAACTCCTATTAACTTTTTATAGATCAAGTACGATGAAAATGCAGCACTACTAAGGATCAGTCAGGTATGCACTCTTTTGTCTAATTATAGACACTATCTAAAGTTGATAATGCTTCACTCATTAAGTTTACTGTTTTACTTCCTTTCGAATTCTTCCGACTACTCCAAATATTCACTGATTGTCAACTAGATTGAACCTTCACAAAAATTAAACTTGTGTCTTGTATGGTGCTTGTAATATGTTATAATGTAGCAATCAATTACTGAATCATCGGTTGTTGTATGGCTTACACTTGTCTTGTATAAACCCCTTATGCATTTTATTTTTCAGGTAGTGGTAGGAGCTGAGCTCACAGCATGACTGAAGACTTTGGAAGGTGGAGACTCATGGATTGCTGTGTGAAATCTTTTGAACATATCTAGGTGTAGCATGTGGTATATTTTGATTAGGAGCGCTTTAAAACTGTGACATTTAAAGTGGACCTAAATCTAAAGTACTATATTTTGGTTAGGAGTACTATACTGTTATCTTGGAGATTCCAGTTTGCTAGGATAAGATATATAAGCTCATCGATTTATGGTTGTAGCTTTGCTGCATACAGTGGAGACATATGAGCATACTTATTATTTTGTGACGTGGGGATCTATATGGACCTAGTTATGGAAGTTATGGTTAATGTGTTGTTACTGATGGATATGCCACAAGATTTCCTTCT
More
|
||||||||||
| CDS seq | ATGCGAAAAGGAGGAGGAAGTAGGGATGGCACACCTGTGAATGACTATGAAAGGAGGAGGGATCAAAATGTTGCTGAGAACAAGCGCATGATACAAGTTCTAAATCTAGAATCTATGCTAAAGTCTATAAGGACTGAAGGAGCTAGCTCTTCACAGCAAGCTAAGAAAACTAGCAAGAAGAGAAAATGCATTAGCTCTGTGCCAATCGAACCTCGAAATCTACGCCCCAGACTAGCAAGAATTGATACAACAAATGAGCATGTAGGACATAGTGATCTGCACCCTAGGCTACCAAGAAATGGAAGTACTAATGGTCCTGAAGGACAAGATGAAGGTCCTCAACCTGTGGCTGCTGAACAGAATGGGGATTCCAACAGAGCACAACCAAAGAAACGAGAAGGAAGAAAATTCACTAGAAAGGATAACATATGCAAGGATAGTGTGGATGTAAGTGAGGCTGAGTATGACCAAGAAATGAATAACCACGAAGTGAGAAACCATGACTACAGGCGGCATGTCAACCAACAAGTGAGTGACCAAGAACTGAGCAGCCACGCTTATAGGCAGAAGGTTGATCAACAAGTGAGTGATCATGAAGTTAGCAACCATGCTTACAGGCAATAG
More
|
||||||||||
| Protein seq | MRKGGGSRDGTPVNDYERRRDQNVAENKRMIQVLNLESMLKSIRTEGASSSQQAKKTSKKRKCISSVPIEPRNLRPRLARIDTTNEHVGHSDLHPRLPRNGSTNGPEGQDEGPQPVAAEQNGDSNRAQPKKREGRKFTRKDNICKDSVDVSEAEYDQEMNNHEVRNHDYRRHVNQQVSDQELSSHAYRQKVDQQVSDHEVSNHAYRQ |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKYG_10g0004060 | OsKYG_10g0004060.01 | Chr10 | 5660694 | 5663228 | + | NAM | ||
| CDS seq | ATGCGAAAAGGAGGAGGAAGTAGGGATGGCACACCTGTGAATGACTATGAAAGGAGGAGGGATCAAAATGTTGCTGAGAACAAGCGCATGATACAAGTTCTAAATCTAGAATCTATGCTAAAGTCTATAAGGACTGAAGGAGCTAGCTCTTCACAGCAAGCTAAGAAAACTAGCAAGAAGAGAAAATGCATTAGCTCTGTGCCAATCGAACCTCGAAATCTACGCCCCAGACTAGCAAGAATTGATACAACAAATGAGCATGTAGGACATAGTGATCTGCACCCTAGGCTACCAAGAAATGGAAGTACTAATGGTCCTGAAGGACAAGATGAAGGTCCTCAACCTGTGGCTGCTGAACAGAATGGGGATTCCAACAGAGCACAACCAAAGAAACGAGAAGGAAGAAAATTCACTAGAAAGGATAACATATGCAAGGATAGTGTGGATGTAAGTGAGGCTGAGTATGACCAAGAAATGAATAACCACGAAGTGAGAAACCATGACTACAGGCGGCATGTCAACCAACAAGTGAGTGACCAAGAACTGAGCAGCCACGCTTATAGGCAGAAGGTTGATCAACAAGTGAGTGATCATGAAGTTAGCAACCATGCTTACAGGCAATAG
More
|
|||||||
| Protein seq | MRKGGGSRDGTPVNDYERRRDQNVAENKRMIQVLNLESMLKSIRTEGASSSQQAKKTSKKRKCISSVPIEPRNLRPRLARIDTTNEHVGHSDLHPRLPRNGSTNGPEGQDEGPQPVAAEQNGDSNRAQPKKREGRKFTRKDNICKDSVDVSEAEYDQEMNNHEVRNHDYRRHVNQQVSDQELSSHAYRQKVDQQVSDHEVSNHAYRQ
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKYG_10g0004060 | OsKYG_10g0004060.02 | Chr10 | 5662123 | 5664489 | + | IsoSeq | ||
| CDS seq | ATGAAGTTAGCAACCATGCTTACAGGCAATAGTTACCACGTAAGACAGTTGCAGTCCCAGAAAGAAGAAATATGGGGGGTGGCCAAGAAGTCACACTTCTTTCTCTTGTGGCTCCATACAATCTTCCTGTGGCGAAGGCTACTGTGCAAACAAGTAACCCCGGCACATTGGTGGGTGGAACTGCTCTTGGTCCAAGATTCTATGAAGTGG
More
|
|||||||
| Protein seq | MKLATMLTGNSYHVRQLQSQKEEIWGVAKKSHFFLLWLHTIFLWRRLLCKQVTPAHWWVELLLVQDSMKW |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | Chr10 | 5662888 | 5663175 | + | OsKYG_10g0004060.02 | OsKYG_10g0004060.01,OsKYG_10g0004060.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.794132 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0001300 | SBH | 29.250967 | 35.822304 | 15.774426 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0004170 | RBH | 0.084812 | 0.000000 | 0.711988 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0001230 | RBH | 1.661301 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
