Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsGoSa_08g0001980 | OGI:08004570 | 12/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr08:1702669-1703192 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | tcaaagcctagcactgaagttcgaaaccaatgcatagaccattgacaataaccttgcacgaagaggtttctccaaaacggtgcccccaaggaggatgcgacgtggatcgccgccaccgctcgttcggaaccgaagcaaggttttcacccggagaatatggtagggaaaggagaggggtatgctaaaacaatgcctccaaggaggggaacgacgccaaatggcgtcgctgttgtcagccggccaaatggctcggcaaggctttcgcccgcgattccctgtccaaacccacaccaccaatccgcacaagaaggatcgtcgtcggtcaacaacattgtcccttcagcgattcggccaaggccaccgcccacagttcttcccgctgtcgacggcacgcccgcacccggactcctccttccccgcctccacataccgccgccgccgacgacgcaccgacagccggatgatggccttcaaccatcgccgccatagataccaccgtcgacagctaccaccgccactgccat
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CDS seq | atggcagtggcggtggtagctgtcgacggtggtatctatggcggcgatgggaatcgcgggcgaaagccttgccgagccatttggccggctgacaacagcgacgccatttggcgtcgttcccctccttggaggcattgttttagcatacccctctcctttccctaccatattctccgggtgaaaaccttgcttcggttccgaacgagcggtggcggcgatccacgtcgcatcctccttgggggcaccgttttggagaaacctcttcgtgcaaggttattgtcaatggtctatgcattggtttcgaacttcagtgctaggctttga |
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Protein seq | MAVAVVAVDGGIYGGDGNRGRKPCRAIWPADNSDAIWRRSPPWRHCFSIPLSFPYHILRVKTLLRFRTSGGGDPRRILLGGTVLEKPLRARLLSMVYALVSNFSARL |
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Function | - |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsGoSa_08g0001980 | OsGoSa_08g0001980.01 | Chr08 | 1702669 | 1703192 | - | NAM | ||
CDS seq | atggcagtggcggtggtagctgtcgacggtggtatctatggcggcgatgggaatcgcgggcgaaagccttgccgagccatttggccggctgacaacagcgacgccatttggcgtcgttcccctccttggaggcattgttttagcatacccctctcctttccctaccatattctccgggtgaaaaccttgcttcggttccgaacgagcggtggcggcgatccacgtcgcatcctccttgggggcaccgttttggagaaacctcttcgtgcaaggttattgtcaatggtctatgcattggtttcgaacttcagtgctaggctttga
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Protein seq | MAVAVVAVDGGIYGGDGNRGRKPCRAIWPADNSDAIWRRSPPWRHCFSIPLSFPYHILRVKTLLRFRTSGGGDPRRILLGGTVLEKPLRARLLSMVYALVSNFSARL |
Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.0 | None |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g03710 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0020980 | SBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0020590 | SBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0020920 | SBH | 0.000000 | 0.0 | 0.0 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0020310 | SBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0026300 | RBH | 0 | 0 | 0 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0020160 | SBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0020070 | SBH | 0.000000 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0020320 | RBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0020230 | SBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0009180 | RBH | 0.0 | 0.0 | 0.0 |