Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsGoSa_08g0001980 OGI:08004570 | 12/16 GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) Chr08:1702669-1703192
Gene Symbol -
DNA seq

tcaaagcctagcactgaagttcgaaaccaatgcatagaccattgacaataaccttgcacgaagaggtttctccaaaacggtgcccccaaggaggatgcgacgtggatcgccgccaccgctcgttcggaaccgaagcaaggttttcacccggagaatatggtagggaaaggagaggggtatgctaaaacaatgcctccaaggaggggaacgacgccaaatggcgtcgctgttgtcagccggccaaatggctcggcaaggctttcgcccgcgattccctgtccaaacccacaccaccaatccgcacaagaaggatcgtcgtcggtcaacaacattgtcccttcagcgattcggccaaggccaccgcccacagttcttcccgctgtcgacggcacgcccgcacccggactcctccttccccgcctccacataccgccgccgccgacgacgcaccgacagccggatgatggccttcaaccatcgccgccatagataccaccgtcgacagctaccaccgccactgccat

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CDS seq

atggcagtggcggtggtagctgtcgacggtggtatctatggcggcgatgggaatcgcgggcgaaagccttgccgagccatttggccggctgacaacagcgacgccatttggcgtcgttcccctccttggaggcattgttttagcatacccctctcctttccctaccatattctccgggtgaaaaccttgcttcggttccgaacgagcggtggcggcgatccacgtcgcatcctccttgggggcaccgttttggagaaacctcttcgtgcaaggttattgtcaatggtctatgcattggtttcgaacttcagtgctaggctttga

Protein seq

MAVAVVAVDGGIYGGDGNRGRKPCRAIWPADNSDAIWRRSPPWRHCFSIPLSFPYHILRVKTLLRFRTSGGGDPRRILLGGTVLEKPLRARLLSMVYALVSNFSARL

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsGoSa_08g0001980 OsGoSa_08g0001980.01 Chr08 1702669 1703192 - NAM
CDS seq

atggcagtggcggtggtagctgtcgacggtggtatctatggcggcgatgggaatcgcgggcgaaagccttgccgagccatttggccggctgacaacagcgacgccatttggcgtcgttcccctccttggaggcattgttttagcatacccctctcctttccctaccatattctccgggtgaaaaccttgcttcggttccgaacgagcggtggcggcgatccacgtcgcatcctccttgggggcaccgttttggagaaacctcttcgtgcaaggttattgtcaatggtctatgcattggtttcgaacttcagtgctaggctttga

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Protein seq

MAVAVVAVDGGIYGGDGNRGRKPCRAIWPADNSDAIWRRSPPWRHCFSIPLSFPYHILRVKTLLRFRTSGGGDPRRILLGGTVLEKPLRARLLSMVYALVSNFSARL

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os08g03710 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_01g0020980 SBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_01g0020590 SBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_01g0020920 SBH 0.000000 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_01g0020310 SBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Minghui 63 | MH63RS3 | HZAU OsMH63_08G0026300 RBH 0 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU NA NA NA NA NA
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_01g0020160 SBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_01g0020070 SBH 0.000000 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_01g0020320 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_01g0020230 SBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_04g0009180 RBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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