Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_04g0027810 | OGI:04095960 | 15/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr04:34789500-34798542 | ||||||||
| Gene Symbol | NRPD2 | ||||||||||
| DNA seq | gccagaacccttctccccgctcttcactctccccggaagcatcgctcgcacgcatcggacgccggaatccccgcctccggcgactagggtttcgccctccggcgacgcccctcctctccaccaggtacattccccctcccgtgtgacgggggctctggtgaggagccccgtccaacatccgcccccctcccctcaatcccctcctcctccccccatttatttctcgcgggttgagagctccgtgttctccggcgaggtggctcttccacgagggtcgtttacaccctgtcgcgagtgggttttcgatgggatgggaggaggagtagggtaggggagcatgcacgttttcatctgggtggctgggtgggtggattgcctaggttggctcggtcggcgcggagtaggggaggagcaggggagaagccggagcacgtctcgtagatcgagattccggggtaggaggttgaggctgcggcggggggtcggaggcagagatcttcgaacgattttgttcctgatggtcatctccctcgccgctttattaagaatggcgtatgttggtatcttgctggcaaacctaaccttgttgggttgctgaggccgctctactgcaatggcgtctatcagcaattaatccaaatctgtctttctgggatggaagggtgtgccaaatcgtccacttttttgtggatttattagtgatttgtttattcgaactcttgatgctgccagtacctttagttcctgtcatgtgatgattgagagctatggtgtaaattgtgtgacataTtttgtgccaggatgagtgatggcctttaattctgttatttagcggagtagtacatattgagataattcttttttcgcttatacagttctgttaaacaaattaagggtacagctactctgatttgttcctttgctagttttgtgtcacctagtgaatcttaggctgaatgcttcttttactgatgtgctgagtttgaaatacctatccttttaagaaaacactgtatgcgggcgagtgtatgtgcacacattgcgcgtgagtttacgtgtaccccatgcacgtaaattcaaggataaattccttttatatgactgaaagttaatccatttccttatttgccactcattctctcagtgccatgtgggtctagggcccacatgtcagtgagccatgagacatcaatggcaattaaaggactctgtagaattttcagtggaaaaaggggatggccacaaagttcaaggatttctatttctagtgcttcaggggtgaacatgccaatgatcatgggtGttcgggtaaatactcacatgtttaggaaacagcgtgcatcaatccacaaggctctgctctgttggttaccaggcgtacacatctgtactgcaggttctgggtttgattcttggtttccagtcattcctattctttttttttgggggtggggccgcgcgggggagggggttgacatcttttttcttcttgtttttttgttaggatttcaatagtttatttcatcctcgtattagtgctattgtgctaagtctcaatatggtatctctactatgaaaaatatttaatttaatttttccattaatataatgatactagttatatgtttttattaaaccttgaatacccaacctgcacattctgcttctgccactgcttgaatgtttgctatctagttagatggtttttgtgatggtactgcactgtttgctaggctattccctcgaagttatggaagagccatcaaaggacaatgggcaatcatcctgtgttgttgatcctgagctggaacctatgatgctggatgatgctagagagggagtatcccatacattggatgatgcaaatgggcattcttctatggatgttgacagaggatgccattctatggacaccacgagatcatctctgggtgatgatggtaaaggaaagcgcgactcatatgcccaaattccagtcgacatgagtattccaagcctagaaaagttctgcaaagaagcatcaaggtccttctttgatgagattggtctgatcagccatcagataaattcttataacgagtttgtctcacatgggctccaggaactttttgattctctgggggaagtgactgtggagcctagttatgatccttcaaatagaggaccaggtggctggagacatgctatcatcaagtttggaagagtgcaactagaagaaccagtattttggtctcatggatgtgatattgatGaacaatcgctcaaactgaagccaaggcatgctcgcctacagaatatgacatattcttccaaaatgaaagtggaagttcatttccaggtcagggttcttattgttattttctacactaaatatgtacttttatgccataatttgttgaatgccatgagcacaaacggtataagcaatgcaaaaaaaaaggtagctgtaaatgcttatatgtgctcagcataattcctttttctactttttgagcgctgtgtacaacacacaatcaattcctgttctcctacgcttagcttgtaaaagtgtgaacatcacgtgacaatttgtccatccaccgaacatcacctgaagaatatagaataaaatagtccacttataagcgtataacatgaaatggagcagtcaaggatcagatgggtgattagtgtttcttgagctgctccacagtcagcagcatgcgctgttgaataatgtatggtactgtttcagtcatgcctgatcctattatcttaattgaactattatgccaatatatttgcctgttcctagtattatcgtgcgctgatttgtctccctgatgcaaaacaaagctatgacgtgttggtgttccttagttttctttggtgttactataatctggtttactgaaatgttcttaaccgtgtcaggtttactctatggagaagagtgacaaggctaaaacagggaatgataaatttggttacaagcgaaacattattaatgaaacatattatataaatattggccgccttccagttatggttatgtcaaatttatgttggctccacaaactcaaggaaagtgattgccaatttgattctggtggatactttttgatcaagggaatggagaaggtaatactgtatattcatgtttctccTtgccttatcattcagtgattatgtattgtgcctggtctccattctttcattatcatgtgttcaagcatttatttttgtatgctaggatgaactgcaaggttgtggggggaaattataTAGtagaaacctctgcctaaatggaaagttggaaactcctactcaaaaagtaaaaaaaaaagagagaggaaaaactcacatgtagatatggtgattgttatccatgcaaaatatcaacatcaaacccaacatagtttgtgagatatgaaactggcaaataatgaaggAaaagtacttgtcctgatttttttttctttttcttcgctattgtcaatttcatatctcatagatagtcaaaatttgatcttgagatttcgtatggttgcctaatatgacctttcctttatgtgagtttctctccctttttgaaatttttggataacctcgtggtttcctccaaagTttggaggaaaaccactacTttataggaaaccaccaagtcatccaaagtagtggttttcactacagattttcctccaaattagttctgtagaatcatttcatttttttttgtttggcgttttagtatagtgtgtggacagctgaccatagccctaattattcgtagtgatctgttggagagtgattctcaaggtttaaaccctctgctggaaagaaagtttttgtaccatatatggcgtttttattttatatcactatgtttcatactatataaattttaaatgctgcaggtattcattgcgcaagagcaaaaatgtctgaccaggatttgggttgaggaccgtccttgctggatggtctctttcttgtctccaatcagaagaaggcgcatatatataaaactaattgattctgcaaataatgaagatgccagtggggggaagatcatttccatctcctttttgtatgcaaatatgccaatatggttgatgttttttgcactaggcatatcatcagataaggatatctttgatgttataaatatggaagactgtgatgcttgtgttatcaacacaattaccgcaactattaaagaatcagatgaattgtgtgaaggcttccgtaaatcagataaagcccggcagtatgttgacgaattgattaagaattcaaaatttcctcctgcagagccatttgatgattataTtgctaaatacctcttccccagcataagtgggaaccggaacaaagcacttttcttaggttacatggtcaaatgccttttaatggctttcactgggaagcgcaaatgtgacaacaaggatgatttccggaacaagaggttggacctagctggtgaattgcttggaagagaactccgtgcgcatattaggcatgcagagagactcatggttaaggccttgcagagagatttaaatagtgagcgtgagttacaagaatttgatcattatctggatgcttcaattattaccaatggtctaaaccgtgccttctctactggttcttggtgccatccttacaaaagaaatgaaagatgcgcaggaattgttgcgacactaaggagaacaaatccgcttcagatgatctcggacttgaggaaaactcgccaacgagttgcttatgctgggaaagccggtgatgcaagatatccgtaagtatcttcttatgtttcatgcctatcttgtactatgatgtaaactgacttgaagaaaaaaatacttacagaaatccatcctactggggaaaattgtgttttatgtccactcctgatggtgaaaactgtggacttgtgaaaaatctagctgttacagctactgttagctccagagtagcaccgccattgattgacaggttcatttcttgtggaatgaataagctgcatgagattcctacagagGAggttcctagaatggacaaaatcttcctgaatggggattgggtggggtcctgtagtgacccggcttcatttgtcttgcgtttaaggtgcatgagacgcagtggtctgatagatccacaggtttgctctcatttcccatggcaagaagttttctgttggaaccTtttttgagcattatgtcaatgattgGTgtgctagtcccatagtcttcatcatgcctagttaggaagagtccctaattttgtttcataacctttttggaaaggtcaaactcaaatctgaatgcttagtaaatcattgacctgtattatcttacttctattcagcttgaataatgttgctttgaacgttatatttaggtaatcctgatttggactctatttaagttatgtattctatctggatgcatacacactgggatattggttcctgcatattttttccccttctgtgtagtatgtgctaccccctccgttgaataaataaagtgtatattgtgtctccaacataacaacttgacaatagttttatagcctgatgtaacaaaaggaaggaatatatggaaacatctatcaagacagataatgatatatttttatatagttttatgtgtttacttcctctgtcccaaaatatagcaacctaggactctgtctagatatgttgttctaggtggtgtcccatctagtcgttctatgttgctatattctgggacagagggagtaatatatattaatggcctctagatCccaagtaagttacattctggaacagagacataacgagggatactttacatgttgccactaatagtgtatctttttttaatgatccatttgattaggttgagataaaatgggacaagcaccaaagggaagttcgggtgttttctgatgcaggtcgaatcctcagaCcacttcttgtggttgaaaatctcaataaaattaggagaccgaagggcagttcatattcttttcagtggttaatgcaacaagaaataattgagtttattggcgttgaagaagaggaagatatacgaagtgcctggggcatcaggaacctatttgagagtgaagaagaggctcccatggtaaaaatgaataaagcagaggatgtcttcaatgttaagaggaagatcggaggggaggtttcgggttatacgcactgtgagctggatctttcttttctgctaggattaagttgtggtattatcccttttgcgaaccacaattttgctcggagggttctttaCcaatctgaaaaacattcacagcaagctattggatactctacaacaaatccgcacatcagagttgataccctttcccatcaactttactatcctcagagaccccttttcaaaacagtgatagctgactgcattggtagatcagaatatacttttgggagaaaggatgactttgccagaccagagtatttcaatggccaaaatgcaatagtggcagtgaatgttcatcaggggtttaatcaagaagattccctggttatgaatagggcttctcttgagcggggtatgtttaggactgagcacttcaggaactataaggctgaagtagagaacaaaggtgggccaggtggcaacaaacgactaaaaatgaaggataagattgacttcggtaaaatgcaaagcaagagaggacgtgttgacaatcttgacgatgatggattaccatatgtcggtgcaagtcttcagagtggtgacattgtcattggaaaggtctcagaatctggtgaagatcatagtattaagctgaagcatactgaaaagggtatggtgcagagggtattactttcagctaatgatgaggggaagaactttgcagttgttactctaagacaggtaatgatattgtttttattaaacatgtatcttctatccagcatattcatgatcctgacattggttgccagttgccactatattcatattatagtactcaacaatagaatgctgtcccttttgaaaatgtgcaatcaaacttttggactttccgagtgatgacataaaagagagattgtgtatatggtaaaaccattactagatctatcatgtacaacactttcattcaattatgccactaacatttagtaaattctaatagctaccagcattttcatagaaattggtttcagagtgcaattgtgcaatgtccaaactggcatatttgtggggagatcaagttatcgaatattggagtatcgtaatcattgccatacaggatgcttgcatgacttgcttgatctggcagtccagatcctgcttatttccttattatttaatttcactgctaaacatgatttagtaattgcattgtcaactaggtgtcacctagtcgttgtcacatgactacatgagtcacccaagactagtgacttggcaatcttattctatcatatgttttttctaatattttaggctgtaatatgatatttacattcactgagttctggtggccaaattaagttttgttaatatgatatttacattcactgagttcaggttcgatcaccttgccttggagataaattttccagcatgcatggccagaaaggtgtcgttggTtttctagaatctcaggagaatttcccatttacttaccaaggaatagtaccagatattgtgataaatccacatgcatttcctacccgtcaaactccaggccagcttcttgaagctgctttggggaaaggaattgccctcggtggtacaatgagatatgctacaccattcacaacagcatcgtttgatgtgatcacagaccaattacacaagtaagtGtttcttctctaatggatgaattggtttctttcctaaattcactaaccaacctcttcacgcacattggtacaatagatgaaatgatttcggaggggcattatcgctcaaatctgtttgtttaactatgtggttacacacaaactgatattgtttgagctttcttgtaaatcttgttcgttattactgcaaagtgcacattgagcAaaaaaagacAaaaaacagtgcagttttacaagtgcgcaattcagcatcacttattcttgatatgttgatcaatcaggtcaatgtgtgcatgtcaccttaagtggcataaacaattgtttcagaaaatgtcttgtagtgaaacattactacaaactgatgtctcgttccatttcagggctggattttcgagatggggagctgaaagtgttctcaatggccggactggtgaaaggatgcactcattgattttcatgggtcctactttttaccagaggctgatacacatggcagaagataaggtcaagttcaggaacacggggccagtgcaCcccctaacacggcaacctgttgctgacaggaagaggtttgggggagtgaagtttggagaaatggagcgtgactgcctcctcgcccatggtgcagcagccaacctccatgagcggctcttcatgcttagtgacttctcgcagatgcacgtctgccagacgtgcgaacgtgtggcgaatgttatcatgaggcctgtcccaggaggaaagaagatccgggggccatactgtgggttctgccgctcttctgaaaacatagtaaggatcaatgtgccctacggcgcaaagctgctctatcaagagctattcagcatggggatctgccttagatttgagacggaagtctgctagaactccacatctactatcgactcaccatgtatatatatcctcgttgtCccttggagattctattatgggcattagtgttgtagccacatgacttctcttccggttggacgatggcatagctaggaggggtgaatctgaagtcaggtgaaacctttCttttgctatttatttgggtgaagactcaattcccatcacctgcctttgatgtcctgtgaccaaccgatggcatagttagggatggggtgaatcagaggtcaactgaaaacccttttgctatagttcgatgtttcaccttggcactgtactatgcacatttggatgaaaactcatttcccatct
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| CDS seq | atggaagagccatcaaaggacaatgggcaatcatcctgtgttgttgatcctgagctggaacctatgatgctggatgatgctagagagggagtatcccatacattggatgatgcaaatgggcattcttctatggatgttgacagaggatgccattctatggacaccacgagatcatctctgggtgatgatggtaaaggaaagcgcgactcatatgcccaaattccagtcgacatgagtattccaagcctagaaaagttctgcaaagaagcatcaaggtccttctttgatgagattggtctgatcagccatcagataaattcttataacgagtttgtctcacatgggctccaggaactttttgattctctgggggaagtgactgtggagcctagttatgatccttcaaatagaggaccaggtggctggagacatgctatcatcaagtttggaagagtgcaactagaagaaccagtattttggtctcatggatgtgatattgatGaacaatcgctcaaactgaagccaaggcatgctcgcctacagaatatgacatattcttccaaaatgaaagtggaagttcatttccaggtttactctatggagaagagtgacaaggctaaaacagggaatgataaatttggttacaagcgaaacattattaatgaaacatattatataaatattggccgccttccagttatggttatgtcaaatttatgttggctccacaaactcaaggaaagtgattgccaatttgattctggtggatactttttgatcaagggaatggagaaggtattcattgcgcaagagcaaaaatgtctgaccaggatttgggttgaggaccgtccttgctggatggtctctttcttgtctccaatcagaagaaggcgcatatatataaaactaattgattctgcaaataatgaagatgccagtggggggaagatcatttccatctcctttttgtatgcaaatatgccaatatggttgatgttttttgcactaggcatatcatcagataaggatatctttgatgttataaatatggaagactgtgatgcttgtgttatcaacacaattaccgcaactattaaagaatcagatgaattgtgtgaaggcttccgtaaatcagataaagcccggcagtatgttgacgaattgattaagaattcaaaatttcctcctgcagagccatttgatgattataTtgctaaatacctcttccccagcataagtgggaaccggaacaaagcacttttcttaggttacatggtcaaatgccttttaatggctttcactgggaagcgcaaatgtgacaacaaggatgatttccggaacaagaggttggacctagctggtgaattgcttggaagagaactccgtgcgcatattaggcatgcagagagactcatggttaaggccttgcagagagatttaaatagtgagcgtgagttacaagaatttgatcattatctggatgcttcaattattaccaatggtctaaaccgtgccttctctactggttcttggtgccatccttacaaaagaaatgaaagatgcgcaggaattgttgcgacactaaggagaacaaatccgcttcagatgatctcggacttgaggaaaactcgccaacgagttgcttatgctgggaaagccggtgatgcaagatatccaaatccatcctactggggaaaattgtgttttatgtccactcctgatggtgaaaactgtggacttgtgaaaaatctagctgttacagctactgttagctccagagtagcaccgccattgattgacaggttcatttcttgtggaatgaataagctgcatgagattcctacagagGAggttcctagaatggacaaaatcttcctgaatggggattgggtggggtcctgtagtgacccggcttcatttgtcttgcgtttaaggtgcatgagacgcagtggtctgatagatccacaggttgagataaaatgggacaagcaccaaagggaagttcgggtgttttctgatgcaggtcgaatcctcagaCcacttcttgtggttgaaaatctcaataaaattaggagaccgaagggcagttcatattcttttcagtggttaatgcaacaagaaataattgagtttattggcgttgaagaagaggaagatatacgaagtgcctggggcatcaggaacctatttgagagtgaagaagaggctcccatggtaaaaatgaataaagcagaggatgtcttcaatgttaagaggaagatcggaggggaggtttcgggttatacgcactgtgagctggatctttcttttctgctaggattaagttgtggtattatcccttttgcgaaccacaattttgctcggagggttctttaCcaatctgaaaaacattcacagcaagctattggatactctacaacaaatccgcacatcagagttgataccctttcccatcaactttactatcctcagagaccccttttcaaaacagtgatagctgactgcattggtagatcagaatatacttttgggagaaaggatgactttgccagaccagagtatttcaatggccaaaatgcaatagtggcagtgaatgttcatcaggggtttaatcaagaagattccctggttatgaatagggcttctcttgagcggggtatgtttaggactgagcacttcaggaactataaggctgaagtagagaacaaaggtgggccaggtggcaacaaacgactaaaaatgaaggataagattgacttcggtaaaatgcaaagcaagagaggacgtgttgacaatcttgacgatgatggattaccatatgtcggtgcaagtcttcagagtggtgacattgtcattggaaaggtctcagaatctggtgaagatcatagtattaagctgaagcatactgaaaagggtatggtgcagagggtattactttcagctaatgatgaggggaagaactttgcagttgttactctaagacaggttcgatcaccttgccttggagataaattttccagcatgcatggccagaaaggtgtcgttggTtttctagaatctcaggagaatttcccatttacttaccaaggaatagtaccagatattgtgataaatccacatgcatttcctacccgtcaaactccaggccagcttcttgaagctgctttggggaaaggaattgccctcggtggtacaatgagatatgctacaccattcacaacagcatcgtttgatgtgatcacagaccaattacacaaggctggattttcgagatggggagctgaaagtgttctcaatggccggactggtgaaaggatgcactcattgattttcatgggtcctactttttaccagaggctgatacacatggcagaagataaggtcaagttcaggaacacggggccagtgcaCcccctaacacggcaacctgttgctgacaggaagaggtttgggggagtgaagtttggagaaatggagcgtgactgcctcctcgcccatggtgcagcagccaacctccatgagcggctcttcatgcttagtgacttctcgcagatgcacgtctgccagacgtgcgaacgtgtggcgaatgttatcatgaggcctgtcccaggaggaaagaagatccgggggccatactgtgggttctgccgctcttctgaaaacatagtaaggatcaatgtgccctacggcgcaaagctgctctatcaagagctattcagcatggggatctgccttagatttgagacggaagtctgctag
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| Protein seq | MEEPSKDNGQSSCVVDPELEPMMLDDAREGVSHTLDDANGHSSMDVDRGCHSMDTTRSSLGDDGKGKRDSYAQIPVDMSIPSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPSNRGPGGWRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHFQVYSMEKSDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLKESDCQFDSGGYFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRRRIYIKLIDSANNEDASGGKIISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITATIKESDELCEGFRKSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLDASIITNGLNRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTATVSSRVAPPLIDRFISCGMNKLHEIPTEEVPRMDKIFLNGDWVGSCSDPASFVLRLRCMRRSGLIDPQVEIKWDKHQREVRVFSDAGRILRPLLVVENLNKIRRPKGSSYSFQWLMQQEIIEFIGVEEEEDIRSAWGIRNLFESEEEAPMVKMNKAEDVFNVKRKIGGEVSGYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCIGRSEYTFGRKDDFARPEYFNGQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEHFRNYKAEVENKGGPGGNKRLKMKDKIDFGKMQSKRGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQRVLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTYQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITDQLHKAGFSRWGAESVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGKKIRGPYCGFCRSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC |
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| Function | DNA-directed RNA polymerases IV and V subunit 2 [UniProtKB/Swiss-Prot:Q9LK40] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_04g0027810 | OsGoSa_04g0027810.01 | Chr04 | 34789500 | 34798542 | + | NAM | ||
| CDS seq | atggaagagccatcaaaggacaatgggcaatcatcctgtgttgttgatcctgagctggaacctatgatgctggatgatgctagagagggagtatcccatacattggatgatgcaaatgggcattcttctatggatgttgacagaggatgccattctatggacaccacgagatcatctctgggtgatgatggtaaaggaaagcgcgactcatatgcccaaattccagtcgacatgagtattccaagcctagaaaagttctgcaaagaagcatcaaggtccttctttgatgagattggtctgatcagccatcagataaattcttataacgagtttgtctcacatgggctccaggaactttttgattctctgggggaagtgactgtggagcctagttatgatccttcaaatagaggaccaggtggctggagacatgctatcatcaagtttggaagagtgcaactagaagaaccagtattttggtctcatggatgtgatattgatGaacaatcgctcaaactgaagccaaggcatgctcgcctacagaatatgacatattcttccaaaatgaaagtggaagttcatttccaggtttactctatggagaagagtgacaaggctaaaacagggaatgataaatttggttacaagcgaaacattattaatgaaacatattatataaatattggccgccttccagttatggttatgtcaaatttatgttggctccacaaactcaaggaaagtgattgccaatttgattctggtggatactttttgatcaagggaatggagaaggtattcattgcgcaagagcaaaaatgtctgaccaggatttgggttgaggaccgtccttgctggatggtctctttcttgtctccaatcagaagaaggcgcatatatataaaactaattgattctgcaaataatgaagatgccagtggggggaagatcatttccatctcctttttgtatgcaaatatgccaatatggttgatgttttttgcactaggcatatcatcagataaggatatctttgatgttataaatatggaagactgtgatgcttgtgttatcaacacaattaccgcaactattaaagaatcagatgaattgtgtgaaggcttccgtaaatcagataaagcccggcagtatgttgacgaattgattaagaattcaaaatttcctcctgcagagccatttgatgattataTtgctaaatacctcttccccagcataagtgggaaccggaacaaagcacttttcttaggttacatggtcaaatgccttttaatggctttcactgggaagcgcaaatgtgacaacaaggatgatttccggaacaagaggttggacctagctggtgaattgcttggaagagaactccgtgcgcatattaggcatgcagagagactcatggttaaggccttgcagagagatttaaatagtgagcgtgagttacaagaatttgatcattatctggatgcttcaattattaccaatggtctaaaccgtgccttctctactggttcttggtgccatccttacaaaagaaatgaaagatgcgcaggaattgttgcgacactaaggagaacaaatccgcttcagatgatctcggacttgaggaaaactcgccaacgagttgcttatgctgggaaagccggtgatgcaagatatccaaatccatcctactggggaaaattgtgttttatgtccactcctgatggtgaaaactgtggacttgtgaaaaatctagctgttacagctactgttagctccagagtagcaccgccattgattgacaggttcatttcttgtggaatgaataagctgcatgagattcctacagagGAggttcctagaatggacaaaatcttcctgaatggggattgggtggggtcctgtagtgacccggcttcatttgtcttgcgtttaaggtgcatgagacgcagtggtctgatagatccacaggttgagataaaatgggacaagcaccaaagggaagttcgggtgttttctgatgcaggtcgaatcctcagaCcacttcttgtggttgaaaatctcaataaaattaggagaccgaagggcagttcatattcttttcagtggttaatgcaacaagaaataattgagtttattggcgttgaagaagaggaagatatacgaagtgcctggggcatcaggaacctatttgagagtgaagaagaggctcccatggtaaaaatgaataaagcagaggatgtcttcaatgttaagaggaagatcggaggggaggtttcgggttatacgcactgtgagctggatctttcttttctgctaggattaagttgtggtattatcccttttgcgaaccacaattttgctcggagggttctttaCcaatctgaaaaacattcacagcaagctattggatactctacaacaaatccgcacatcagagttgataccctttcccatcaactttactatcctcagagaccccttttcaaaacagtgatagctgactgcattggtagatcagaatatacttttgggagaaaggatgactttgccagaccagagtatttcaatggccaaaatgcaatagtggcagtgaatgttcatcaggggtttaatcaagaagattccctggttatgaatagggcttctcttgagcggggtatgtttaggactgagcacttcaggaactataaggctgaagtagagaacaaaggtgggccaggtggcaacaaacgactaaaaatgaaggataagattgacttcggtaaaatgcaaagcaagagaggacgtgttgacaatcttgacgatgatggattaccatatgtcggtgcaagtcttcagagtggtgacattgtcattggaaaggtctcagaatctggtgaagatcatagtattaagctgaagcatactgaaaagggtatggtgcagagggtattactttcagctaatgatgaggggaagaactttgcagttgttactctaagacaggttcgatcaccttgccttggagataaattttccagcatgcatggccagaaaggtgtcgttggTtttctagaatctcaggagaatttcccatttacttaccaaggaatagtaccagatattgtgataaatccacatgcatttcctacccgtcaaactccaggccagcttcttgaagctgctttggggaaaggaattgccctcggtggtacaatgagatatgctacaccattcacaacagcatcgtttgatgtgatcacagaccaattacacaaggctggattttcgagatggggagctgaaagtgttctcaatggccggactggtgaaaggatgcactcattgattttcatgggtcctactttttaccagaggctgatacacatggcagaagataaggtcaagttcaggaacacggggccagtgcaCcccctaacacggcaacctgttgctgacaggaagaggtttgggggagtgaagtttggagaaatggagcgtgactgcctcctcgcccatggtgcagcagccaacctccatgagcggctcttcatgcttagtgacttctcgcagatgcacgtctgccagacgtgcgaacgtgtggcgaatgttatcatgaggcctgtcccaggaggaaagaagatccgggggccatactgtgggttctgccgctcttctgaaaacatagtaaggatcaatgtgccctacggcgcaaagctgctctatcaagagctattcagcatggggatctgccttagatttgagacggaagtctgctag
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| Protein seq | MEEPSKDNGQSSCVVDPELEPMMLDDAREGVSHTLDDANGHSSMDVDRGCHSMDTTRSSLGDDGKGKRDSYAQIPVDMSIPSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPSNRGPGGWRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHFQVYSMEKSDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLKESDCQFDSGGYFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRRRIYIKLIDSANNEDASGGKIISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITATIKESDELCEGFRKSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLDASIITNGLNRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTATVSSRVAPPLIDRFISCGMNKLHEIPTEEVPRMDKIFLNGDWVGSCSDPASFVLRLRCMRRSGLIDPQVEIKWDKHQREVRVFSDAGRILRPLLVVENLNKIRRPKGSSYSFQWLMQQEIIEFIGVEEEEDIRSAWGIRNLFESEEEAPMVKMNKAEDVFNVKRKIGGEVSGYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCIGRSEYTFGRKDDFARPEYFNGQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEHFRNYKAEVENKGGPGGNKRLKMKDKIDFGKMQSKRGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQRVLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTYQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITDQLHKAGFSRWGAESVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGKKIRGPYCGFCRSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.884577 | 15.635455 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0641000 | RBH | 4.298502 | 5.198854 | 13.433597 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g54840 | RBH | 1.779973 | 2.268236 | 2.267606 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0641000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0028360 | RBH | 1.629555 | 12.124836 | 9.767755 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0029130 | RBH | 0.330753 | 3.953489 | 5.718728 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0028710 | RBH | 1.963697 | 10.490947 | 16.629272 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0028530 | RBH | 0.285605 | 0.348940 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0028800 | RBH | 7.071681 | 17.975092 | 27.741297 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0513700 | RBH | 8.0705715 | 18.349223 | 19.361082 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0027440 | RBH | 0.329830 | 0.652586 | 1.691031 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0027880 | RBH | 0.276123 | 0.266375 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0027720 | RBH | 0.142288 | 15.765417 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0004470 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0028420 | RBH | 0.985671 | 1.848556 | 1.949934 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0028380 | RBH | 0.489595 | 9.118036 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G027770 | RBH | 0.539661 | 4.370812 | 6.542580 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0027630 | RBH | 2.025476 | 22.692162 | 13.403304 |
