Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_12g0006400 | OGI:12013610 | 8/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr12:5005487-5017245 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | acgatgaatgagtattcataaaagaattattcactgataacataacatcatcaacctcacaattaggcatccctacaaatcagaaattacatcaacaatcaggaagcacgacaagcgagtaacgctagaggccatatcccagaccaggcggatatcagatcaatcaacaattaataatcacaggtaatgacaatgacaaggatcggaggcagattgggctaacagctgctgcgtggggaggaggcagccagtgaagatgtcatgccggtgagctacagagaaaccaaacggcgatgtgggagaccacggcggtggctgcatggcctccacagttgttcccgtacgtcttctcttctagtgctgatctctacgcctcactgtggcgaggcggtggcaaggagcctacgcagcccggcgagatccgtcggcggcaacgtcgtcttatcttacaacaataatccataacaatgtggcagaatggaaacaaatccaacgacggcgaggagggcacacagaagcttcaccatcctcaactccttggcgcgcctctctttgtccttcaacaaaccatcgataatgcctgcgatacaactcaggttaattaggaatatccacacactgctactgatgaagggcttccgtctcaaactacgatttagacctgtggcagtaaaatttagttgtggtctaattaagcaagctcatccgaagagctacttggtgaaaaacaatctgttgttccttatcatatcactctaggaaattttcaagcagacaaaaataatctagctctgtatgtaatgcttgaaggaaaaatcttctatcaataatcacgtttcatagagatgatgtgcaagataaggtgatgaatcgcatcatgtgctttgccttgcatccaaaccgttccatccatatctctcttttcgtcagtagacgttaatttactgtagtaaattttattctagtgggcaaataattatcaagtgaacactatattggtagttatatgacaacggagcttgagaaaaaagaaagaggctaaccatatactctacataaacactaactccagggaaactatattttagtttgcacatacagtgatggattaattagaggaggcaaaactataatatgcagtttaagcttctagattctattcttggctatgcacatacagattccaaaacataagaaaagaataccaaaatactccataatgtataggaagagaatacgtcgacaaaagtatacaccaatgagtaatgtttacctctagatatggaagagcagacgatatttgtgtccaatttgaagggctcccgtgtgtaaaacacataccaccttctcctgatgcgcatttcacctgcatatccactgatttgctggatatggctgatcttgtcccagtcagagcaagaggcccccattgatatgttaccaagcagtggcaaactacagtccagcaccaaactctttggctttacatcttgtagatatcctgggagtgttttcatgctgaagtctagcagatagagcttttgcagcgcaggtattccctccaatagtttgagctttgggcagtaattaatgctaagcacttgcagttttgggacacctctgatgctctccatgtcagggtttttatacaggtgaagctccacaactgaaggcaaattctgtaaagacttgaggttatggaccatgaacaatttgagaacactcaaagccctggcatgttctcagcaagtccaagaggaagttgtcgcaatttgcacctgtctagtgtaagctcatgcaggagtggcatggcttgaatgtgttcctcccacacccattcctccaactccagcactactgtaaactctagcgtctctaatataggaaatgcaaccgctgctcgggaaggatggcaatcaccattgtgttgctgtatctgcaggaattcatgcccgatgcgctcaatggctggggcacgcctgatctgtagaagcttcaaacaggaaagctgacacaagccatcagggagtttggtgcagcaaggcaggccatccaacttaagactcgtcaatctatcaagcctcacagatgcttttgatgtcatccactttgggagctgccaaccaaaatatcctctgatgtaaagttgttctaagcagtatgaagggcacaactcatcaaaaacctccttgattcgtcgctgctcgtctatagaaatgattccttcctctttcaagaatccatcatctctctgcctatcagtgcactctaaccaccatatggcaagatgtttcttggcaccaagcatggcctttgcagcggaagagctggcagatacattctccaaaccctttatatggagatccctgagctgagaaagaggtcccagctcctccaaactacaccactcatcttttgatgaactgctacccatctgagctggaaacgagtataatgttctcaaacttgtaaggcgaccaaaacccctaggtatactttttatgtttgtgcccataaggttaagagatcttagccgctctagttttataatgctaccaggaagttgttgtatttgttcacagcatgtaatcccaatgtactccaagaatttcatcttgccgatgccatctggcaggctacgtatgtcagtacgggaaaagtacaagtgcctcaagttcttcaattggcatagagaatcaaaagtagcaagttgtgcatatactatactcagaacccttaagtttgagaatttgctgcataaatcattggccttcaacttgatatgagtacttccataaaaaaataacgttctaactgagttttgttcttgccatgcactccaatctaattcattctgtatgcacaaccaacgatatctatttgaatcgaggtcagtgactctaagatgttccatatgaaagggtagtgcttcatctttagccacatgtcgacaaaatgagcgaaccacatcatgcatggtccaattattattgtcgccgggcattgtctgtaaaaggttccttatgattaactcattgtaatactcctttcctagttcttccggttcatttgattttccattaacaaaaccttcactaatccatacttcaacaatcaaatgtttattgggtttaccatatttagggaagagtgagcaatacaaaaggcattgcttcaaatgagggtctaggtcatcgtagcttaaatatattgcatggtttatctcttcaggcattccatccactaaccatgaaggacttcttagtacctttccccactcaatttcatttatctctttgtggttcaaaagccctgcaatcgctttgatagctagcggtaaaccaccacatctttctaaaattctaaagccagtactctttagcttctcaatcgcatactcatctttcaaagttgaagcaatctgcaagcggttgaagcccatgatgttaatacatataggctagatttgcgattgatcgagaagggtaatttgtgcatttgccaaacatagaattcttagctattatttaagttagcatttctattacttcccggtctaaatttaattagagtaaccttacagttggttgtttacttcatactccctccatttcaaaatgtcactgactctaagttgtcccatttgagatgatagtgcttcatctttagccaaatgttgacaaaatgagcgaccgacatcatgcatgctccattcactattgggcattgcctgtataaggttccttataattaactcattgtaatactcctttcctagctcttccggttcatttgattttccattaacaaaaccttcacttatccaaatttcaacaatcaaatggttattgaggcattgcttcaaatgaggggctagctaggtcatcatagcttaaatatattgcatggtttatcttttcgggcattccatctactgaccatgaaggacttggtactttccccactcaattttatttatctctttatggttcaaaagccctgcaatcgctttgatagctacaagtaaaccaccgcatctttctaaaattccaaagccagtactctttagcttctcaatcgcatactcatatttcaaagttgagacaacctgcaagcggttgaatcccataacgttaatagatataggatgcatttgcttacctacttttttttttactttctttagtaacgaagatgatcattctctttgttttttgatctagaagggtaatttgtgcatttgacacacacagaattcttagctattatttaatttagcatttctattacttcctggtctaaatatatttagagtaaccttacagttggtttgtttacttcataatctgcaaaaactctccaaccctttgcgtactttccaatatgtctgcttcactacagtataacacatcatatatatcttgcaatctctatttacattcattaaacctataaacctatataattcatcccctcttagtgtacttaatagctatttcctgatattccgtgcttccacatcatcaagaaatgcattgcccgttcgatcgaatctggatacccctaataaatactttgtctctctattcacaagcttactattgtaattggacccatctcaatccatattttcctctccttctccacacccagcatgagccaccggcctcatactctgccatgacgagcgcaaatggcatctcctactctcccacatgacctcccgatcgcttcacactccccttaccctccaactccctcccccacttctaaggcccagcgctccaccacaatgtgtttttatacaggcacggccttatcactattggcttctataggacaattttatatgtatgctttgtgtgatttgataattttgttgtgtttatttaattttaggagcaagtggcttatagtatgctcaagcttttccctaagcaggtatttatttggctggatcacgttgaggggtggataaaaatctgacacaatcaatgcgtgctgtatggattctcaaatccttccctgtttatgtgttatgatgctaggcatactcctgttaatgcttccatataatgactgcaagagtataatgtttccttcaaatataagatagcatattgataggttggtattccgttctccttatcttaagctttgtatactcctacaaatttatttgcagaagcatggcatttttgtgcctcgtatgtttatgtgccattatgttcacataactaggcctcactatattgttgtccatgtctactcttatatctccatcttacccttttcacttagaattagtcactttttttaactagctgacctaagttggttctgtagaatacgtcaaacttgctcagagttttgccattcactaactgatgatatgcttattttctcttttgctccaatcagataaaaaaaagtaattatcacccagctcctatattttcttgatttgcacaaatgattctgaacattcccctagagtttccctataaaataccttggattgccactacttcttggaaggatgcgcaagacggatattcaaccaatcttcgataagatcgcagcacgggtcaccggctggaggggaaaaacatgggaccagtagggagatcaactctggtcaagtcaatgatgacagcgcagcccatctacctactcaccaccctcaaggtcaccaaagaagccgtaggcctcctcgaagtgaagagaaagaggttcctatggaaatgcaaaataaactagaaaaagatgtgcctcccaaccttgaaccgggaaaaaccggaaccagctcctcagccggttcgatttgctgcaaggactggacatgcaatcgaaccggtcacaaccagatgaaccgggcagtttttggtgaaaaccggtgaatccgacgcctctgaaccggcggttctggcgagcacgtggagcaggctacaaaggcccactaggcccaagtcatgcatgtgtcatttttactgaataaatgaaaaaagggtgggaagatgggattcaaaccctggttgcctcattacaaactcaataactaaaccaactagaccacttatgcatgttgttcaagggagaatatacatataatatgaatgctccggttctgcagtcgaaccggacgacccagcggtcagacctgtgagccggtgaacaagaagcttgaccggttcgatggccggtccggctttttgcactatgctcccaaccgtgcaaagaggactgggagttcttaacatggagaagttcacgagggccctgcgcctgagatggctctggcacgaatggaaagaccccaccaagccgtgggtgggcctcaagacaccatgtgatgaaacatataaattgctcttcaccacgaccactacaataacgattggggataataaaacgattcgcttctgggactcatcctggctagatgggcaaaggcattatgccactaccctatgcagtctccaaaaataaaaagagaaaaaaatactacgtgaaggaataaaaaacgacgtttggattgatgatctggacttaaatggcagcacccatttcacagtggatctgatcaacaaactcgtgtccctgtgagacacaacccagagcatccttctagatcaaaacaagcctgaccatactgcctagaagctttcaagccatggagaatacttgggagcgtcggctgatagagcgatgcatgggaaccataggtaccaattttaacggcttaatatggaaatcatgggctcctacaaagtgcaaatttatgcatggcttgtgatccaaaatagagtttggacttctgatcaactcgtagccagaggttggccaaatagcgggacatgccccctctaacgtacgtcaactgaaacagcaagccacctggttgcccaatgtagatacaccaaaagaatttggagcctaactaccgcatgggtagcatatcaacaactagacccgagtcactaggacccatgccaaagcgttaacgactggtgggaaatgttagccaactcaaaggaagtacccaagaaaggcatgcggaccctaatcctactcgtcgtctgggaaagctcgaaagaaagaaattagcgggttttcgagcacaaggagatggcaaaattaaaggaggcaagaacttgggctatgggaggagcaaggcagcttcgggattttgtttcgaaccaaccataggtgccatgtagctctgtacattttttttccttacccctagccctaggggttgtattttttacctctatatttaatgaaatagcacaatctcgtgctgattccttcaaaaaaaaatgaaactagttaaatagcacccattccacatggttttattattaggtggtggtgattgtgcatgcataactgacataacatttgatccacaagattagagacaaaaaatggttggcatacctagtatatctattactccttaaaaaacatctagtggaggtgacagtgaatctgccaccccactattgctttggctgttttcagaaattacctacagatattttctaatattgtggaatcatcgaaaatttggtttaaacaagtgaatagcatataatcaaataaacaaacaagtgatactaagatatctattatatattaaaagtccatgaaacttcctacaaatgctcctaagccaccatgtgtcgctcctacaaacgcttataaaccgccaagtggcactacaaaatctaatcgttcatttttctttaaattagtgggtccaatattttcaaccattagatctaataaaaaacaaaactcccctatctccatgtatccccatctcccctcctcctgttggtacgtacatacttcactcctctcctcatctctttttaatttcttaatctctaatttaagccacatatcttatttttattgttaattaaataaataatttaatatctatgctgttctatgcgccatatgctttctatggcaaccaaatataacaaggaaaaaaaatttcactataaaaaagttaataacatattttatgttactttaaataattctacaaacatgtgtcgctaaattgtatcgacgatatccaatctatctattatatagtgaaagcccatcaaatttcctataaatgctcctaaacgccatgtgacggctcctataactccacgtgacgctctaataaattagataaaaaagaaacaactagctttgattttcactaaaacaactagctctaatatttttttctctaactgttctctcattataactaaattaacaatataagatacatatgcctatattttgctatataattatagcatttgggtgcaatccaccggtgcagtttgcgcgccatctaaataccttataatctaacaacaaatattatattactatgaatcattctacattctacaaatatgcatagctaaattaaatatatagtatcgaaataaaaatttaaaaaatacatattcaatttgctaaaagaaaaagaaataattcaacaatataggtcgcagcatgatatgtttgaaaacatgtatagctaaacacactacataagcaagagtaactaactgaaatataaatagtctgagccactatataaaaaatcgagtgccttttagtagagaaaatattaagttttttttctaaatgtgctcaaataatccaaacaagctaaatgatcttctatttaatattccacctttataagtttctcaaacacggtctacgattcatgcccgcgcgaatgcgtgggctaccttccttgtttgataaaaagtatattttgctgtgacatattatgatattattttcttctgcccaaagcaaagcttgggtattttgctagtgtgtacagtgtgttacttttaatgaaactgcaaatacatgttaatgttggaaagtgctttcatggatattaattaagaatatattttatgagtaatcaagtcaaaggttaatcttgaagactttaccaatacataataggattttctacagagggaataattaccaaaataaatactctgaggcaggagtaagaaataaatacgaacctgtttcttgagtaacaaccaggcatcttgccgagataatatgtccacgcggtggtacggctgtatggccttcatctctcgggcaactctttcgtctctggtggtgatgagaacccagctgccttgagcagccgagttaactaaagggattcttaatgaattgttccaagcatggacgctccacatatcatccatcaccaaaaagattttctttccagatattgcttctcgaaggattggctgaagcagggacagttcttgatgcccactgtgctcaccaccggcaccagtgatggccgtcctcaccagctcaggatcactgaattcctggttaatgctcagccatattattttgtcgaacttctccttgatgtcctggtggttgaagatgttctgtgcgagggtagttttaccaatacctccaacaccgacgatggcaacgaccctgacgttgctgctgatactcgccgcacttgcctcttcctcctccctcgttagcaactccaccagtctccttgtatcttgctcgatcttattcccgacaacgcctgaccgatcaagctctggtgttgtccggcgtaagccatggccttgagctgtcctgctgcagtcaccgtagcgatcgagcttgatgaagctgaattgctcggcacgctgcttgatgccatcaagccgctggttcagcgccatgatgcggcttccaatgtggtgggcgttcaagggattccgcagggagagtagcgacgggttgttgctgcgcctactgtcctgatccatggctttgagctgacacagctccaggatgtccgtggcatcgtacatggcatccttgagctccttcacccaaccctgcacgtgcagatcggtgatgcgcctccgctccgcgtcggcgaggaactccttgagcccatcaagcctgacgcggaggctgtcgatcttgtcagagataccaagcagcatgcccacctccttcctcgccatcttggcaagcacattgctcaggttggatgccaaggcctccagaaccacagccatcaaggctgaacgagtagtgcttctgcatctcagatttaaccagcttgtcagtttttacatacatatatagcaataaaacagaaaaggtgctctaaaggattgtgtacctggctttaattagtatgcaacttctccgatcctgttcagaaccaagtagattgatgaaatggaatggtggcacagagctcaatatatacacatattgagccatttttaattaatacaatctattttctaaccctactcaatggctttcctaatcctgacagcaatgtggatgcaggacacctcacgcgagcagccacgtattagattatcaagaatcttagtcaacaacgaaaaggggatcaaatttcaagcgaactgattgttgtctccatccatattgtggagatatctaagaatatgccatctcctaacaactaaacaaaactgatttcaaacaaaactgttgacgcaagttaaattgtactgaaataaaccatctctgcactgcactaggaagttgccgcgtcactttccacttccaacaaaataatctcagatgttctgctgtaaacatatctgtttctttaatagaaatgggagggggtaacatctatagttaaaaaaactaaataatctcaggtggctgcatcagcatcaaccttcacttttagattagcttatcacaatgtgttgactcgggacttctcaatatttttggtcacagtttgttggaacattgcaatcagtgttctgctcttctagcccatgaatctcggccacaactacgccataaaattatcatacatgctgtgaagtttgtacatgacacagaaattccaatgtacctatgtcaaataaatctatcaagaaactaatggggtcgctgctctcccttggagaatcagtagatggaaaaactcttctttttttttctttgaacgaaacatacaaactgttatgtggcaagaatatttcctggtattggatttttttttcttcaatatttcctgctattggatttgtctgacagaacatttgatggttgatataagtatcaaatacatgtgcttcattctttgcccaactaaaggtgccttctctgactggtgcgaattattagtgctaagctattaccaacaaaatttcaatcagagaatcacaatggttttgtttcgataatgggaataaaagctcaatgaacaatgatgtttccatgtttcatatattgcttcagtagttcaaatgtgtcaagataggaaatatcgtagatccaacaaaaaaaaaaggtgcagatttcctaggaaataaaaaaatgaaacaaaattgaaaaaaaatacattaccctgccatgacgtcaccgatggagctgctgccgcttcagctacccttggtgcagagcaaggcaacgcggacgcagctcacccccactatccagcacacgctgggatccccaatccaggcctcaggctgctcatctgcattgccccacggccgcagccgttcctgcagtgttgggagagagatggggaataaccccgcacgagttcaccatggagagcaccacactgcggaaatacgaccacctgctgagggatgactatcttatcggcgccgatggccatctccggctgcctctcctgccgaagtggtttttgc
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| CDS seq | atggctgtggttctggaggccttggcatccaacctgagcaatgtgcttgccaagatggcgaggaaggaggtgggcatgctgcttggtatctctgacaagatcgacagcctccgcgtcaggcttgatgggctcaaggagttcctcgccgacgcggagcggaggcgcatcaccgatctgcacgtgcagggttgggtgaaggagctcaaggatgccatgtacgatgccacggacatcctggagctgtgtcagctcaaagccatggatcaggacagtaggcgcagcaacaacccgtcgctactctccctgcggaatcccttgaacgcccaccacattggaagccgcatcatggcgctgaaccagcggcttgatggcatcaagcagcgtgccgagcaattcagcttcatcaagctcgatcgctacggtgactgcagcaggacagctcaaggccatggcttacgccggacaacaccagagcttgatcggtcaggcgttgtcgggaataagatcgagcaagatacaaggagactggtggagttgctaacgagggaggaggaagaggcaagtgcggcgagtatcagcagcaacgtcagggtcgttgccatcgtcggtgttggaggtattggtaaaactaccctcgcacagaacatcttcaaccaccaggacatcaaggagaagttcgacaaaataatatggctgagcattaaccaggaattcagtgatcctgagctggtgaggacggccatcactggtgccggtggtgagcacagtgggcatcaagaactgtccctgcttcagccaatccttcgagaagcaatatctggaaagaaaatctttttggtgatggatgatatgtggagcgtccatgcttggaacaattcattaagaatccctttagttaactcggctgctcaaggcagctgggttctcatcaccaccagagacgaaagagttgcccgagagatgaaggccatacagccgtaccaccgcgtggacatattatctcggcaagatgcctggttgttactcaagaaacaggttgtctcaactttgaaatatgagtatgcgattgagaagctaaagagtactggctttggaattttagaaagatgcggtggtttacttgtagctatcaaagcgattgcagggcttttgaaccataaagagataaataaaattgagtggggaaagtaccaagtccttcatgctcagatgggtagcagttcatcaaaagatgagtggtgtagtttggaggagctgggacctctttctcagctcagggatctccatataaagggtttggagaatgtatctgccagctcttccgctgcaaaggccatgcttggtgccaagaaacatcttgccatatggtggttagagtgcactgataggcagagagatgatggattcttgaaagaggaaggaatcatttctatagacgagcagcgacgaatcaaggaggtttttgatgagttgtgcccttcatactgcttagaacaactttacatcagaggatattttggttggcagctcccaaagtggatgacatcaaaagcatctgtgaggcttgatagattgacgagtcttaagttggatggcctgccttgctgcaccaaactccctgatggcttgtgtcagctttcctgtttgaagcttctacagatcaggcgtgccccagccattgagcgcatcgggcatgaattcctgcagatacagcaacacaatggtgattgccatccttcccgagcagcggttgcatttcctatattagagacgctagagtttacagtagtgctggagttggaggaatgggtgtgggaggaacacattcaagccatgccactcctgcatgagcttacactagacaggtgcaaattgcgacaacttcctcttggacttgctgagaacatgccagggctttga
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| Protein seq | MAVVLEALASNLSNVLAKMARKEVGMLLGISDKIDSLRVRLDGLKEFLADAERRRITDLHVQGWVKELKDAMYDATDILELCQLKAMDQDSRRSNNPSLLSLRNPLNAHHIGSRIMALNQRLDGIKQRAEQFSFIKLDRYGDCSRTAQGHGLRRTTPELDRSGVVGNKIEQDTRRLVELLTREEEEASAASISSNVRVVAIVGVGGIGKTTLAQNIFNHQDIKEKFDKIIWLSINQEFSDPELVRTAITGAGGEHSGHQELSLLQPILREAISGKKIFLVMDDMWSVHAWNNSLRIPLVNSAAQGSWVLITTRDERVAREMKAIQPYHRVDILSRQDAWLLLKKQVVSTLKYEYAIEKLKSTGFGILERCGGLLVAIKAIAGLLNHKEINKIEWGKYQVLHAQMGSSSSKDEWCSLEELGPLSQLRDLHIKGLENVSASSSAAKAMLGAKKHLAIWWLECTDRQRDDGFLKEEGIISIDEQRRIKEVFDELCPSYCLEQLYIRGYFGWQLPKWMTSKASVRLDRLTSLKLDGLPCCTKLPDGLCQLSCLKLLQIRRAPAIERIGHEFLQIQQHNGDCHPSRAAVAFPILETLEFTVVLELEEWVWEEHIQAMPLLHELTLDRCKLRQLPLGLAENMPGL |
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| Function | Disease resistance RPP13-like protein 4 [UniProtKB/Swiss-Prot:Q38834] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_12g0006400 | OsCMeo_12g0006400.02 | Chr12 | 5006972 | 5017245 | - | NAM | ||
| CDS seq | atggctgtggttctggaggccttggcatccaacctgagcaatgtgcttgccaagatggcgaggaaggaggtgggcatgctgcttggtatctctgacaagatcgacagcctccgcgtcaggcttgatgggctcaaggagttcctcgccgacgcggagcggaggcgcatcaccgatctgcacgtgcagggttgggtgaaggagctcaaggatgccatgtacgatgccacggacatcctggagctgtgtcagctcaaagccatggatcaggacagtaggcgcagcaacaacccgtcgctactctccctgcggaatcccttgaacgcccaccacattggaagccgcatcatggcgctgaaccagcggcttgatggcatcaagcagcgtgccgagcaattcagcttcatcaagctcgatcgctacggtgactgcagcaggacagctcaaggccatggcttacgccggacaacaccagagcttgatcggtcaggcgttgtcgggaataagatcgagcaagatacaaggagactggtggagttgctaacgagggaggaggaagaggcaagtgcggcgagtatcagcagcaacgtcagggtcgttgccatcgtcggtgttggaggtattggtaaaactaccctcgcacagaacatcttcaaccaccaggacatcaaggagaagttcgacaaaataatatggctgagcattaaccaggaattcagtgatcctgagctggtgaggacggccatcactggtgccggtggtgagcacagtgggcatcaagaactgtccctgcttcagccaatccttcgagaagcaatatctggaaagaaaatctttttggtgatggatgatatgtggagcgtccatgcttggaacaattcattaagaatccctttagttaactcggctgctcaaggcagctgggttctcatcaccaccagagacgaaagagttgcccgagagatgaaggccatacagccgtaccaccgcgtggacatattatctcggcaagatgcctggttgttactcaagaaacaggttgtctcaactttgaaatatgagtatgcgattgagaagctaaagagtactggctttggaattttagaaagatgcggtggtttacttgtagctatcaaagcgattgcagggcttttgaaccataaagagataaataaaattgagtggggaaagtaccaagtccttcatgctcagatgggtagcagttcatcaaaagatgagtggtgtagtttggaggagctgggacctctttctcagctcagggatctccatataaagggtttggagaatgtatctgccagctcttccgctgcaaaggccatgcttggtgccaagaaacatcttgccatatggtggttagagtgcactgataggcagagagatgatggattcttgaaagaggaaggaatcatttctatagacgagcagcgacgaatcaaggaggtttttgatgagttgtgcccttcatactgcttagaacaactttacatcagaggatattttggttggcagctcccaaagtggatgacatcaaaagcatctgtgaggcttgatagattgacgagtcttaagttggatggcctgccttgctgcaccaaactccctgatggcttgtgtcagctttcctgtttgaagcttctacagatcaggcgtgccccagccattgagcgcatcgggcatgaattcctgcagatacagcaacacaatggtgattgccatccttcccgagcagcggttgcatttcctatattagagacgctagagtttacagtagtgctggagttggaggaatgggtgtgggaggaacacattcaagccatgccactcctgcatgagcttacactagacaggtgcaaattgcgacaacttcctcttggacttgctgagaacatgccagggctttga
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| Protein seq | MAVVLEALASNLSNVLAKMARKEVGMLLGISDKIDSLRVRLDGLKEFLADAERRRITDLHVQGWVKELKDAMYDATDILELCQLKAMDQDSRRSNNPSLLSLRNPLNAHHIGSRIMALNQRLDGIKQRAEQFSFIKLDRYGDCSRTAQGHGLRRTTPELDRSGVVGNKIEQDTRRLVELLTREEEEASAASISSNVRVVAIVGVGGIGKTTLAQNIFNHQDIKEKFDKIIWLSINQEFSDPELVRTAITGAGGEHSGHQELSLLQPILREAISGKKIFLVMDDMWSVHAWNNSLRIPLVNSAAQGSWVLITTRDERVAREMKAIQPYHRVDILSRQDAWLLLKKQVVSTLKYEYAIEKLKSTGFGILERCGGLLVAIKAIAGLLNHKEINKIEWGKYQVLHAQMGSSSSKDEWCSLEELGPLSQLRDLHIKGLENVSASSSAAKAMLGAKKHLAIWWLECTDRQRDDGFLKEEGIISIDEQRRIKEVFDELCPSYCLEQLYIRGYFGWQLPKWMTSKASVRLDRLTSLKLDGLPCCTKLPDGLCQLSCLKLLQIRRAPAIERIGHEFLQIQQHNGDCHPSRAAVAFPILETLEFTVVLELEEWVWEEHIQAMPLLHELTLDRCKLRQLPLGLAENMPGL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_12g0006400 | OsCMeo_12g0006400.01 | Chr12 | 5005487 | 5017245 | - | NAM | ||
| CDS seq | atggtccataacctcaagtctttacagaatttgccttcagttgtggagcttcacctgtataaaaaccctgacatggagagcatcagaggtgtcccaaaactgcaagtgcttagcattaattactgcccaaagctcaaactattggagggaatacctgcgctgcaaaagctctatctgctagacttcagcatgaaaacactcccaggatatctacaagatgtaaagccaaagagtttggtgctggactgtagtttgccactgcttggtaacatatcaatgggggcctcttgctctgactgggacaagatcagccatatccagcaaatcagtggatatgcaggtgaaatgcgcatcaggagaaggtggtatgtgttttacacacgggagcccttcaaattggacacaaatatcgtctgctcttccatatctagaggcattatcgatggtttgttgaaggacaaagagaggcgcgccaaggagttgaggatggtgaagcttctgtgtgccctcctcgccgtcgttggatttgtttccattctgccacattgttatggattattgttgtaa
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| Protein seq | MVHNLKSLQNLPSVVELHLYKNPDMESIRGVPKLQVLSINYCPKLKLLEGIPALQKLYLLDFSMKTLPGYLQDVKPKSLVLDCSLPLLGNISMGASCSDWDKISHIQQISGYAGEMRIRRRWYVFYTREPFKLDTNIVCSSISRGIIDGLLKDKERRAKELRMVKLLCALLAVVGFVSILPHCYGLLL |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 1.079384 | 1.572504 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0199100 | RBH | 0.068330 | 0.059972 | 0.708012 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g09739 | RBH | 0.045145 | 0.039409 | 0.178063 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0199100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0006340 | RBH | 0.0 | 2.216993 | 1.919807 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0006410 | RBH | 0.030995 | 0.000000 | 0.332205 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0006660 | SBH | 0.000000 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0006330 | RBH | 0.000000 | 0.014279 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0006450 | SBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0083600 | SBH | 0.009411 | 0.0363565 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0006420 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0089100 | SBH | 0 | 0.0556615 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0006330 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0012960 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0006440 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0012750 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0006300 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G006180 | RBH | 0.216389 | 0.787791 | 0.627466 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0006370 | RBH | 0.0 | 0.0 | 0.0 |
