Basic Info
Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsCMeo_11g0021610 OGI:11072790 | 16/16 CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) Chr11:25052874-25056373
Gene Symbol -
DNA seq

AGAAAGTACCAGCTGTAAGTAACTGTGTTGTTCATGCTCCATCAGAAGAGTTGAAAACAAATGTAAAAAGGTTATCTGGTTGTCAAACTCAATATCTATTGATCTCAGCCTTTTATTTTCACTATATTTCTTTTGCACTGTTTGAAAGACTGAACTGGCTGATAGCAGCAGCAAATGAACTTGAATTCTATTACAGAGCAGAAAAGACTCAAACCGGTAAATGGCTTTCAACAAGTGCATGGACCGACAAAAAAGTGTCAGGGCTTCTGTTTTCCCTTTGGCACCTATGTGCTACTATTCATTGAGGCCTGAATCTCCTCCAGAGTTTTGCCTTTTGTCTCTGGCACGATCTTCACAATGAAAAGGATGGCCACTGCGCAAACTAATGCGAAAAGGAAGAATGTCCCTGCATGAAACAGAATGTGGTTTATCTCCAAACTCATGTTACAAATTTAACAGTAAACTTGAAAATGTGTACATTTGAACTGTTTCCAAGATTATCCTTTGCACGGTTGTAGTGAAAGACGGCTAAAGTCAGCAAAACATGACTAGAGATTTGGCTCACCTGAAGAACTCCAGCTCATGAAGAAGTTGAAGGCAAAAGAAACTGCCCATGAACCGGACCAGTTCACCAGAGTCACAAAGCTTCCACCGATTCCTTTTATATTTATGGGAAATATCTGCATCCAATACGAACAAACATGCTAATGTTACACTGAATTCTGGTTCTATTTGATGAAATCTTTAGTGAAGGCTGAAATCTGGTGGTTGAATGTTTGGCACTTTACCTCTGACATTATGACCCAAGGGACTGCCCCCATTCCTATTGAATAGCTAGCAATGTACACCTGTTTCAGTTATAAAAATGGATTTTAGCATAACTGAACTACAGATAAATTTCGAAATAATCAAACAGAATAAAAATTTCAATGTACCAATATGCCAGTGAGTGCGATGATTGGTACTTGCTCCAAGAAAAGCCCATGAATCTACACAACAAATAATGTGCTTCAATTTGGTTTACATAACCCAACAAAGATGGGTGCAAATCTTCTTGGGGGAAAATGCAAAATAGGCGTAAGGATTGAGTGATTTTGTCAAATATTACCTTCAGGTAGAAGGATACTGCTGACATGAGAGAGCCAATTAGGAGTCCTGATGTTGAAATCTGGATAGAAATAAAAGGAAGTGGTTAAGTGTGTTTTTCAGTAGTTTCTGCTGTAACAGTTCCCCAAGTGCTGAAAATTTGAGTGCACTTACCAACAGCAGTGGCCTTCTACCACTTCTGTCCATCAGTAATGCTCCAACAGCTGTGATTGGCGCCTGTTATTAACAGTATACAGTCAAAACTTTTACTTAGAATTTAAGGAAAATTTGATCAAGTTCTGCACGTCTATTATTTTAACCTGGATACACCCCATCAAGATTGTTCCTAGGTCTCCTGAAGCAAACCCTGCATAATGAACCAACAATTTAGTCTGACATCTCTGGAACTGACAAAATCTAGTGTTTTGAAGCGCGAAAAATTGCGACTTTACCGGCTGATACAAAAGTTTCACTGGCATAGAACAAGATTCCATTAATTCCTACAAACTGCTGGAACACCATCAGGCCAACACCAACAATGACAGGACGGATGTAGGCTCTGTTGAAAAGATCCTGAACTCCAGCCTTTGGAAGGTTTTCAATGGTCTCAATGAACTCCTGTATATATTGAGGAATTACTGATAACAATCACAATTTTCTGCACCATAATTGTATCTTAAAATATACTGTTAACGATGTCGAACCTTGATTTCTGCAGCTTCAATGGACACATCAGCATCTTTACCACGGAGGCGTTGGAGCGCTATTTCAAACTCCTTTTGCCGTCCAACCTTTGCCTGTGTTTTCAATTTGGTGCTGAATTGTTAGAATGGAAATTCAGAATCAAATCTAAGTATATTGTTCAATGCCTTACCAGCCACCGAGGGGATTCAGGAATGAAGGAAAGACCAACTATAAGAATTATGGACGGTACAAGTCCTGTAAATGTGTCAAATACAAAAATTATCACTACCTTGTTGTAAGTTCTACATGACCAGATGATAGTATGGAATTTTTCCTATGAATATACCTGCTATGACCAACATGCGCCATGTCACCATAGTACCGACAATATAAGTAACAGATAACCCAGTGCACACCAGCAACTGCAGTTGAAACGCCAATTTGATTTCAAACACTAATATGATATATCTTTCTAAAAAGTGTTGCAGCACCTTCAGGTTGTTTAGTTTTTGTTAAGAGTAAAATTACTTGGTTCAGTGTTGTAAGCCCCCCACGAAGAGCTTTCGGAGCTATTTCTGCTATGAAAACCGGTACCTGTTCAGTTACAAGAGCTGCTGTCAGTGAATCTAAACAATATGTTCAGTGCTCGAAAGATTAATATGTTCAGTAAGTGATGTCCTTGATTGATCATTCATACCACATATGAAAATACTCCTACTCCAAATCCGGTACAGAATCTCCCAAAATCAAGTGAAACAGCACCCTGAAAAGTTGTGAATTCAGTTAAGCAGTTTCTTGACATTCTTGACTTATTGAAGTATAAGATTAAGAAAACGTACTTGTGCAAAGAAGATTGCAAGCCATCCGACAATGCAAACAAGAGCAGAAGTCCTCATTGCCTGCTCCACTCACAAAACTTTTTGGTTAATGAATTATAACTCTTGATGAATTCTCACAAAGATTTTAATAGATAAAAGATTATTCAGGCTTGTAGATACCCCTTTTCTTCCAGAAATGTCAGCAAGGTGCCCACTTGCAACTGCTCCTATCATTGCCCCAATTGTTATTATTGATCCGAAAACCGAATACTGCGGAGAATAACAGGACAACATGATCAGGAACTGAGAATTACATTGTCCTCCCCTTTTGGGAAACTTGTACAGAAGTAGAAATTCAGTTGAGAATGGCATTGCGACAAATTTCAGAAATACTATTTGAGTGAAGTAGCGAAAATTTCGGCAACCTCGGAGAGCGAGAGCTGAAGATCCTCCCTGATCTTGGACTGAGTTGGTGCTGAGTAACCAATCTGCAAGAGAATAATACAATTAATTCATGCACTTGCAAATTCAGAAGTAATTTCTGAATGAAATCTCCATTATCAAAAGGAATGTTGACAAGTGTGTTTCAATCCTATTCTGATCTTTGAACTCACCGAGACGCCGAAGACGAAGGAGCCGAGCACGGCAACGCCCGTGCTGGCGATGACCATGGCCAGCGATCCATCGCCGCCGGCCCGGGGAAGGAGGGACTCGCTTGCACCACTGGACACTCCCATGGCGATGGCCTTAGCTGCTAACTGATGCTAACCTTCAACAAGTTCAGTTCTTGCTTGAACTGAAGCTACAACCTTGAGCTCTGCTACTAAGCTGCATATATAGTAAGTGGCTTTATGTAATTAACCGTGTATGCAATGAGTGATTAGAGTGCTTAACCTCGATCCTTATGCATGT

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CDS seq

ATGGGAGTGTCCAGTGGTGCAAGCGAGTCCCTCCTTCCCCGGGCCGGCGGCGATGGATCGCTGGCCATGGTCATCGCCAGCACGGGCGTTGCCGTGCTCGGCTCCTTCGTCTTCGGCGTCTCGATTGGTTACTCAGCACCAACTCAGTCCAAGATCAGGGAGGATCTTCAGCTCTCGCTCTCCGAGTATTCGGTTTTCGGATCAATAATAACAATTGGGGCAATGATAGGAGCAGTTGCAAGTGGGCACCTTGCTGACATTTCTGGAAGAAAAGGGGTATCTACAAGCCTGAATAATCTTTTATCTATTAAAATCTTTGCAATGAGGACTTCTGCTCTTGTTTGCATTGTCGGATGGCTTGCAATCTTCTTTGCACAAGGTGCTGTTTCACTTGATTTTGGGAGATTCTGTACCGGATTTGGAGTAGGAGTATTTTCATATGTGTTGCTGGTGTGCACTGGGTTATCTGTTACTTATATTGTCGGTACTATGGTGACATGGCGCATGTTGGTCATAGCAGGACTTGTACCGTCCATAATTCTTATAGTTGGTCTTTCCTTCATTCCTGAATCCCCTCGGTGGCTGGCAAAGGTTGGACGGCAAAAGGAGTTTGAAATAGCGCTCCAACGCCTCCGTGGTAAAGATGCTGATGTGTCCATTGAAGCTGCAGAAATCAAGGAGTTCATTGAGACCATTGAAAACCTTCCAAAGGCTGGAGTTCAGGATCTTTTCAACAGAGCCTACATCCGTCCTGTCATTGTTGGTGTTGGCCTGATGGTGTTCCAGCAGTTTGTAGGAATTAATGGAATCTTGTTCTATGCCAGTGAAACTTTTGTATCAGCCGGGTTTGCTTCAGGAGACCTAGGAACAATCTTGATGGGGTGTATCCAGGCGCCAATCACAGCTGTTGGAGCATTACTGATGGACAGAAGTGGTAGAAGGCCACTGCTGTTGATTTCAACATCAGGACTCCTAATTGGCTCTCTCATGTCAGCAGTATCCTTCTACCTGAAGATTCATGGGCTTTTCTTGGAGCAAGTACCAATCATCGCACTCACTGGCATATTGGTGTACATTGCTAGCTATTCAATAGGAATGGGGGCAGTCCCTTGGGTCATAATGTCAGAGATATTTCCCATAAATATAAAAGGAATCGGTGGAAGCTTTGTGACTCTGGTGAACTGGTCCGGTTCATGGGCAGTTTCTTTTGCCTTCAACTTCTTCATGAGCTGGAGTTCTTCAGGGACATTCTTCCTTTTCGCATTAGTTTGCGCAGTGGCCATCCTTTTCATTGTGAAGATCGTGCCAGAGACAAAAGGCAAAACTCTGGAGGAGATTCAGGCCTCAATGAATAGTAGCACATAG

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Protein seq

MGVSSGASESLLPRAGGDGSLAMVIASTGVAVLGSFVFGVSIGYSAPTQSKIREDLQLSLSEYSVFGSIITIGAMIGAVASGHLADISGRKGVSTSLNNLLSIKIFAMRTSALVCIVGWLAIFFAQGAVSLDFGRFCTGFGVGVFSYVLLVCTGLSVTYIVGTMVTWRMLVIAGLVPSIILIVGLSFIPESPRWLAKVGRQKEFEIALQRLRGKDADVSIEAAEIKEFIETIENLPKAGVQDLFNRAYIRPVIVGVGLMVFQQFVGINGILFYASETFVSAGFASGDLGTILMGCIQAPITAVGALLMDRSGRRPLLLISTSGLLIGSLMSAVSFYLKIHGLFLEQVPIIALTGILVYIASYSIGMGAVPWVIMSEIFPINIKGIGGSFVTLVNWSGSWAVSFAFNFFMSWSSSGTFFLFALVCAVAILFIVKIVPETKGKTLEEIQASMNSST
Function Sugar transporter ERD6-like 16 [UniProtKB/Swiss-Prot:Q8LBI9]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsCMeo_11g0021610 OsCMeo_11g0021610.01 Chr11 25052874 25056362 - NAM
CDS seq

ATGGGAGTGTCCAGTGGTGCAAGCGAGTCCCTCCTTCCCCGGGCCGGCGGCGATGGATCGCTGGCCATGGTCATCGCCAGCACGGGCGTTGCCGTGCTCGGCTCCTTCGTCTTCGGCGTCTCGATTGGTTACTCAGCACCAACTCAGTCCAAGATCAGGGAGGATCTTCAGCTCTCGCTCTCCGAGTATTCGGTTTTCGGATCAATAATAACAATTGGGGCAATGATAGGAGCAGTTGCAAGTGGGCACCTTGCTGACATTTCTGGAAGAAAAGGGGTATCTACAAGCCTGAATAATCTTTTATCTATTAAAATCTTTGCAATGAGGACTTCTGCTCTTGTTTGCATTGTCGGATGGCTTGCAATCTTCTTTGCACAAGGTGCTGTTTCACTTGATTTTGGGAGATTCTGTACCGGATTTGGAGTAGGAGTATTTTCATATGTGTTGCTGGTGTGCACTGGGTTATCTGTTACTTATATTGTCGGTACTATGGTGACATGGCGCATGTTGGTCATAGCAGGACTTGTACCGTCCATAATTCTTATAGTTGGTCTTTCCTTCATTCCTGAATCCCCTCGGTGGCTGGCAAAGGTTGGACGGCAAAAGGAGTTTGAAATAGCGCTCCAACGCCTCCGTGGTAAAGATGCTGATGTGTCCATTGAAGCTGCAGAAATCAAGGAGTTCATTGAGACCATTGAAAACCTTCCAAAGGCTGGAGTTCAGGATCTTTTCAACAGAGCCTACATCCGTCCTGTCATTGTTGGTGTTGGCCTGATGGTGTTCCAGCAGTTTGTAGGAATTAATGGAATCTTGTTCTATGCCAGTGAAACTTTTGTATCAGCCGGGTTTGCTTCAGGAGACCTAGGAACAATCTTGATGGGGTGTATCCAGGCGCCAATCACAGCTGTTGGAGCATTACTGATGGACAGAAGTGGTAGAAGGCCACTGCTGTTGATTTCAACATCAGGACTCCTAATTGGCTCTCTCATGTCAGCAGTATCCTTCTACCTGAAGATTCATGGGCTTTTCTTGGAGCAAGTACCAATCATCGCACTCACTGGCATATTGGTGTACATTGCTAGCTATTCAATAGGAATGGGGGCAGTCCCTTGGGTCATAATGTCAGAGATATTTCCCATAAATATAAAAGGAATCGGTGGAAGCTTTGTGACTCTGGTGAACTGGTCCGGTTCATGGGCAGTTTCTTTTGCCTTCAACTTCTTCATGAGCTGGAGTTCTTCAGGGACATTCTTCCTTTTCGCATTAGTTTGCGCAGTGGCCATCCTTTTCATTGTGAAGATCGTGCCAGAGACAAAAGGCAAAACTCTGGAGGAGATTCAGGCCTCAATGAATAGTAGCACATAG

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Protein seq

MGVSSGASESLLPRAGGDGSLAMVIASTGVAVLGSFVFGVSIGYSAPTQSKIREDLQLSLSEYSVFGSIITIGAMIGAVASGHLADISGRKGVSTSLNNLLSIKIFAMRTSALVCIVGWLAIFFAQGAVSLDFGRFCTGFGVGVFSYVLLVCTGLSVTYIVGTMVTWRMLVIAGLVPSIILIVGLSFIPESPRWLAKVGRQKEFEIALQRLRGKDADVSIEAAEIKEFIETIENLPKAGVQDLFNRAYIRPVIVGVGLMVFQQFVGINGILFYASETFVSAGFASGDLGTILMGCIQAPITAVGALLMDRSGRRPLLLISTSGLLIGSLMSAVSFYLKIHGLFLEQVPIIALTGILVYIASYSIGMGAVPWVIMSEIFPINIKGIGGSFVTLVNWSGSWAVSFAFNFFMSWSSSGTFFLFALVCAVAILFIVKIVPETKGKTLEEIQASMNSST

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Gene Transcript Chromosome Start End Strand Source
OsCMeo_11g0021610 OsCMeo_11g0021610.02 Chr11 25052874 25056362 - NAM
CDS seq

ATGGGAGTGTCCAGTGGTGCAAGCGAGTCCCTCCTTCCCCGGGCCGGCGGCGATGGATCGCTGGCCATGGTCATCGCCAGCACGGGCGTTGCCGTGCTCGGCTCCTTCGTCTTCGGCGTCTCGATTGGTTACTCAGCACCAACTCAGTCCAAGATCAGGGAGGATCTTCAGCTCTCGCTCTCCGAGTATTCGGTTTTCGGATCAATAATAACAATTGGGGCAATGATAGGAGCAGTTGCAAGTGGGCACCTTGCTGACATTTCTGGAAGAAAAGGGGCAATGAGGACTTCTGCTCTTGTTTGCATTGTCGGATGGCTTGCAATCTTCTTTGCACAAGGTGCTGTTTCACTTGATTTTGGGAGATTCTGTACCGGATTTGGAGTAGGAGTATTTTCATATGTGTTGCTGGTGTGCACTGGGTTATCTGTTACTTATATTGTCGGTACTATGGTGACATGGCGCATGTTGGTCATAGCAGGACTTGTACCGTCCATAATTCTTATAGTTGGTCTTTCCTTCATTCCTGAATCCCCTCGGTGGCTGGCAAAGGTTGGACGGCAAAAGGAGTTTGAAATAGCGCTCCAACGCCTCCGTGGTAAAGATGCTGATGTGTCCATTGAAGCTGCAGAAATCAAGGAGTTCATTGAGACCATTGAAAACCTTCCAAAGGCTGGAGTTCAGGATCTTTTCAACAGAGCCTACATCCGTCCTGTCATTGTTGGTGTTGGCCTGATGGTGTTCCAGCAGTTTGTAGGAATTAATGGAATCTTGTTCTATGCCAGTGAAACTTTTGTATCAGCCGGGTTTGCTTCAGGAGACCTAGGAACAATCTTGATGGGGTGTATCCAGGCGCCAATCACAGCTGTTGGAGCATTACTGATGGACAGAAGTGGTAGAAGGCCACTGCTGTTGATTTCAACATCAGGACTCCTAATTGGCTCTCTCATGTCAGCAGTATCCTTCTACCTGAAGATTCATGGGCTTTTCTTGGAGCAAGTACCAATCATCGCACTCACTGGCATATTGGTGTACATTGCTAGCTATTCAATAGGAATGGGGGCAGTCCCTTGGGTCATAATGTCAGAGATATTTCCCATAAATATAAAAGGAATCGGTGGAAGCTTTGTGACTCTGGTGAACTGGTCCGGTTCATGGGCAGTTTCTTTTGCCTTCAACTTCTTCATGAGCTGGAGTTCTTCAGGGACATTCTTCCTTTTCGCATTAGTTTGCGCAGTGGCCATCCTTTTCATTGTGAAGATCGTGCCAGAGACAAAAGGCAAAACTCTGGAGGAGATTCAGGCCTCAATGAATAGTAGCACATAG

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Protein seq

MGVSSGASESLLPRAGGDGSLAMVIASTGVAVLGSFVFGVSIGYSAPTQSKIREDLQLSLSEYSVFGSIITIGAMIGAVASGHLADISGRKGAMRTSALVCIVGWLAIFFAQGAVSLDFGRFCTGFGVGVFSYVLLVCTGLSVTYIVGTMVTWRMLVIAGLVPSIILIVGLSFIPESPRWLAKVGRQKEFEIALQRLRGKDADVSIEAAEIKEFIETIENLPKAGVQDLFNRAYIRPVIVGVGLMVFQQFVGINGILFYASETFVSAGFASGDLGTILMGCIQAPITAVGALLMDRSGRRPLLLISTSGLLIGSLMSAVSFYLKIHGLFLEQVPIIALTGILVYIASYSIGMGAVPWVIMSEIFPINIKGIGGSFVTLVNWSGSWAVSFAFNFFMSWSSSGTFFLFALVCAVAILFIVKIVPETKGKTLEEIQASMNSST

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Gene Transcript Chromosome Start End Strand Source
OsCMeo_11g0021610 OsCMeo_11g0021610.03 Chr11 25052938 25056373 - IsoSeq
CDS seq

ATGGGCAGTTTCTTTTGCCTTCAACTTCTTCATGAGCTGGAGTTCTTCAGGGACATTCTTCCTTTTCGCATTAGTTTGCGCAGTGGCCATCCTTTTCATTGTGAAGATCGTGCCAGAGACAAAAGGCAAAACTCTGGAGGAGATTCAGGCCTCAAT
Protein seq

MGSFFCLQLLHELEFFRDILPFRISLRSGHPFHCEDRARDKRQNSGGDSGLN
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
RI Chr11 25055483 25055731 - OsCMeo_11g0021610.03 OsCMeo_11g0021610.01,OsCMeo_11g0021610.03 All
RI Chr11 25055483 25055731 - OsCMeo_11g0021610.03 OsCMeo_11g0021610.03,OsCMeo_11g0021610.02 All
SE Chr11 25055065 25055341 - OsCMeo_11g0021610.03 OsCMeo_11g0021610.01,OsCMeo_11g0021610.03,OsCMeo_11g0021610.02 All
A5 Chr11 25055542 25055642 - OsCMeo_11g0021610.01 OsCMeo_11g0021610.01,OsCMeo_11g0021610.02 All

Expression

Leaf Root Panicle
FPKM 0.000000 52.686256 1.638911

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0643800 RBH 0.000000 0.000000 0.671158
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g42430 RBH 0.000000 0.000000 0.160854
Nipponbare | IRGSP 1.0 | RAP-db Os11g0643800 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0021810 RBH 0.000000 2.657422 0.000000
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0021770 RBH 0.000000 6.187627 0.396078
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0021120 RBH 0.000000 5.718041 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0021620 RBH 0.000000 15.376167 5.527867
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0384200 RBH 0.4321295 3.7527035 2.59183
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0022190 RBH 0.000000 5.727972 0.711607
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0404300 RBH 0.0188 0.0149025 0.0467115
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0021960 RBH 0.000000 0.362798 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0022060 RBH 0.000000 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0021710 RBH 0.000000 50.172340 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0021300 RBH 0.000000 0.0 0.445266
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0021470 RBH 0.000000 26.671761 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G021450 RBH 0.000000 38.581802 0.000000
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0022010 RBH 0.000000 59.110474 3.665853
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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