Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_02g0015510 | OGI:04044660 | 8/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr02:14433702-14440646 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTAATTCACTAATTTGTAGGAAGATACTGGACTTTTGGATTTGAAAAAAGTTTCAGAAGATATGTCTAAAGTAGATGGTGATTGATAGAGCAATTCTTGCTCATAAGTTCCAGTATTAGTACTGCGCCGAACATAAAGCTTGTGGTTGGTAGTAAAACATCGATTTTTCTTTTGAGATAGAGTTCGATCCTCAACTATTTCTCGCGATATCTTCTTACGAAGTTTTGTTAGGGCATCTATAACAGCCTCTGGTTTAGGTGGGCAACCCGGCAAGTAGACGTCCACAGGAATTAACTTATCAACTCCCCGAACAGTACTATAGGAATCCGTACTGAACATTCCACCAGTAATAGTACAAGCTCCCATAGCAAAAAAGGAGAAGTCATTCCAATCCTCAATTCTCCTTTCGAGATTCGGCGATAGTGAATCAATTGAACGCGCTTCGAAGATTTGTTCTACTTTTGGAAGACCTTGCGTTATGTCACTAGATCTCGCTTTTTCGTATATAAACGTAACTAACCTATCCCCTTTGTAAAGGATTTCTCCATAATGACCATGAACAGTTGCTCCTGTAGTGGCCAAATAAGGCTTAGCTGCTCTTATAACAAAGGAATCTATATTTACAATGAAAATTTGACCTGATTTTTTTATGTGCGATTTAAATAGACATACATTTTCGCAAATAAATTGTCCAAGGTGAATTTTTGCTGATGTCTCTTCCCAAGAATCATGAGGGAGAAAGTGCCAATTTAACTGGAATGGATCCAACATGATGTTACTATCGAAATTTGAAGTCCTTTGATTTTCATTTATTAAAGAGTGTTTAAGTCCTTGAAGTACTTTGAAGTTTTGTTTCAAATTGTCAAGGAGCAAATGCTTTTTTAACAGGATCTGATTATACGTTAGTAAATAGTAAGATGAAGAAAAATTCGATATACTAGGTGCAATAGTACCTAAGAGTCCCGAAAAATTTCGAAAGAGCCCCCAAAATTTTGGAATAGGAATTCTAGGATTCGATTCTTTTACCCCATTGGGATTTTTTGAATTCTTAAAAAAACCAATTCGAGAACAGTTGGATGCCGACAAAACCATCAAAGATTGGTATTCTTTATTTCGATTCAACAAGGTACCAATAGCTTCTTGATGTTGGCTAAGTGATTGAATCTTCGCCTTGGAATAAAAGGAATTGGTATTGGTGCGATCTAACCTATTATGGAGAATCAGTCCTGCACTTCTGCTATCATACCTTTTTCGTGTATACGAAATAGTGGATTTGATTAACCCAATTCTTAGGAAATCGCGAATCAGACCATTTGCTCTTATCTCAACAAGGGAAGCACGAGCCTCCTCTTTTTCTTCTTGTTCCCAATTCAATACTAAGCAAGTTCGAACGAATTGACTATTCGTATGATAAATTCTTTGAGTTAACTTGCTATTTTCATGAGAAATAAAATTGACAAGTCGAAGTTGGAGATTACCCTCTTCCTGCAAGAGATCCTGTGGGAAAAGTGTTGCTAAATTTCTCCCTTCGTTCATTTCATACGCGACTGCAGGTCGAACCAAAACAAAATACTTTTCCTTGCTCTTGAGAATTTTTTTCCACTGAACATAGACCCAATTTTCCCTTTTTTTTGATTCCTTCGAATCTTTTTTTTCTCTTTCTAGTGGTATCAAACTGCCACCTAATATCTTATCCGCCTCTTCAGGAAAATGAATATCTCCAGAAAAGATTTTTAGTTCCGTATGGCTTTTTTTTCTCTTCACTCGAACCAATCCACCCAGCCGACTTCTTGTATTTTTTGTGAGTTGTGTATCCACTCCAATAATACTATTGTCAAGTACCTTTAGGGATGAGGATCTCGGCAAGATATGCAGTTCTTGGAGAATGAAAAAAAACCGATCTACTTCTTTTTGGTATTTTAGACTAAATTCTTTTGTTCCTCGATGCTCAATCAAAACCCCCTTTTTTAAGACGGAATCTTCCTCCGGGTTCCCATATTCGTCCTCTGAGTCTTCCTCTGAGTCTTCCTCTAAAGTCCCATGTTCGTCCTCTGAGTCTTCCTCTAAAGTGCCATATTTATCCTCTCGGGGCCTATATTTGTTCTCTGGACTCCCATATTCGTCCTCGGATTCCTCCTCTCGAGTCCTATATTCGTCCTCTAGGATTCCATATTCATCTTCTAGGGTTTCATATTCGTTCTCTGGGATCCCATATTCATCTTCTAGGGTTTCATACTCCTCCTCTCGAGTCCTATATTCGTCTTCTAGGGTTTTACATTCTTCCTCTCGGGTCCTATATTCGTTTTCTGGGCTCCCGTATTCGTTCTCTGAGTCTTTCTCTCGAGTCCTATATTCGTCCTCTAGGGTCCTATATCTAAATTTAACAATTCCTGAACCCTTTTTTAGCTTTCAAATTGATGCCACATCTTCAAGATTGCCACATCAGGACAAAGAAAGAAATCATATCAGATGATAATATATAGTTTCCCAAAAAGAGATCTAGCCATGCTTCCGACCGTTTTGATTCTTTAGAACAACTCGATGAATTTAGTAGATCCTTTTAGGAGGCCCTCAATGACCATAGATCGAACCTATCCTATTTTTACAGTGCGATGGCTGGCTGTTCACGGACTAGCTGTACCTACTGTTTTTTTCTTGGGATCAATATCAGCAATGCAGTTCATCCAACGATAAACCAAATTCCAACTATAGAACTATGACACAATCAAACCCGAATGAACAAAATGTTGAATTGAATCGTACCAGTCTATACTGGGGTTTATTACTCATTTTTGTACTTGCTGTTTTATTTTCCAATTACTTCTTCAATTGAGAGAAAGAAAGAGAGTAGTAAGAATTCTCTTATCCCCATTTGGAAGGATACCATCCTTATAACTATCCATGACTGTTTTTGTCTCTAGCATGACCACTTGATAAAATGTGGAGGAAAGTAGGGGAAATGGCCGATACTACTGGAAGAATTCCTCTTTGGCTGATAGGTACTGTAACCGGTATTGCTGTGATTGGTTTAATAGGTGTTTTCTTTTACGGTTCATATTCTGGATTGGGTTCATCTCTATAGTAATTGGAGGGACCAGGTTGTAAACATGAAAAAATAGGAACTTAGCGGGTCCTTACCCCCTTTTATCTGATTAGAGCGGAAAGGACCCGCGGAATTCTTACTCTTATAACCCGACTTTTTTAATCTATTCCGTAACCTACAAACGGGTTTCCTATTTTGATTTGTAAAAATAACAAAGAGAAAGCCTTTGCTCTGATGGTCAGAATCCCTCTATTTATTCGTTTTGTTTGTTAATTTTGTTTGTTAATAATGTTAGTGAAGTAATCCATCAGTTGATTTATAACCCCCTCGCCAATGAAATTAATTCACTTTTATGAAGCGAGGAGAAAGAAAGGATCAATCGAGGATCCAATATTTTATTCCCCGGAGGAAGTCTCTTGTAAATCATTGATTTAATTTAGAGTAATAAACTAATAAAACCTTAATTAAAACTACTCTCAACTAGCCTAAAAATAAAAAACAGCCTTCAATGGAAGAGTATCCTTTTTTTTGCAAAATTTCTGTAAGTTCTAAATTGAACTTAATTGAACAAGTCAAGCAATTCTATTTGGTCACAAAAAATTTGTCCCCCGCCATATTTTCTTTCCCTCTTTTTGTCCACTACATCGCCTGAACCTAAGCAAAAGAGGTTCAAGAGACAGACCCAAATAAAGAAGAAATAGTAATCTTTGCCGAATAGGAAGAAAAAAGATTCATATTTCGATACAAGAAGAATCGACACAAGAAAATGGCAAAAAAGCCTTTTTCTTGTGCCCAATAGAGGATTAAGAAGACCAGCAATCCCTCCTAAAAGGATTTGTTCCTTTTATTGTTCTCGCCCTTGCCTTGCATTCTCCTCGTTTTGCATGAGATGATAGAAATAAGGAATTGCAGACAAGACATCTCGCAAACAAAAAATAGTCTAAACAAAAAAAAGATTTCCAAAATGGATCATAGAGAATTCTAGCAATCGCCAATAAATCGCGGCTTTTTACCAACTTGATGGTAAGAAATCCCGGGACCTAGAAATTCATTTCGTACAATTGAACCTTTTCAAACTGTTTCTTTTTGAGAACCAAAAAAACTTGTGCCAAAATAACGGATGCGAAGAAGAACAAAAGGCCTTGAACGCGTAATGGATCCTGAAGCACTATTTCTGCATCCCCCTGACCAAACCCTCCCACATTAGGATTACTTGTTAATGGTTGATCAAGCTTGATCGATTCCCCCTCTGAAACAAGAAGTTCTGGACCGGGAGGTATAAGATCAATCACTTGGCGTCCATCCGATGCATCGACTATGGATATTTCATATCCCCCCTTTTCTTTACGCAGTATTTTTCTTACTACAACTGTTGACGTTGCATTATAGACCGTATTGTTACTCTTGCTACCATCAGGATAGATCTGTCCCCTTCCTCGGTTTCCCCCCACATATATGGGATATTTTAAGAAATGAACGTCTTTCTTCATAGCAGGGTCGGGGGAAAGAATGGGAAAGACGATTTCACTATATTTCTTACCGGGAACAGGGCCTATCACAAGAATATTTTTTTTATTGGGACGATAACTCTGAAAAGAGAGATTTCCTATCTTTTCTTTCAACTCAGGAGAAATACGGTCGGGCGGCGCTAATTCGAATCCCTCGGGCAAAATAAGAACAGCACCCACATTCAACCCTCCCTTTTTCCCATTAGCAAGAACTTGTTTCAGTTGCATATCATAAGGAATTCGAAGAACTGCTTCAAATACAGTATCGGGAAGCACTGCTTGGGGAACTTCAATATCCACAGGCTTATTCGCTAAATGGCAATTGGCACATACAATTCGTCCAGTTGCTTCTCGTGGGTTTTCATAACCTTGCTGCGCAAAAATGGGACATGCATTTGAAATAGATGTCCGAGTTATTACGTATATCATGATCGATACAGAAATCGATCGAGTCATCTGTTCCTTTACCCAAGAAAAAGTATTTCTATTTTCCATGTCCAATCACAGATCCCGGAATTTCTACAATAAATTAGATAGGTAGCTAAGCTAATCTAGTTCCCTATACACGAATCTGTTGTCATTCTACTGCAACAGTTGTACTGGAATGATGAATACCTTGAGCAGGTAGAAATAGAAAAAAAGAATTTTGCTAAAATGGAAAAAGGCTTTCTTTCTAAAGGAAAAAGGATGCTAATTTTGATTAATATCAGGAGATCAAATGAGTTTATGCTTCACTAATTGAATGATAAATGACGACAAGCGAAGGAGATAGGCGGTTTAAACAAAAAAAGACCCAAAATTTCAAACATGTATCTAGAATCACAGGAAAACAACAAACAAAAATAGTGAAAATTAGCTCGTTAGGAACCCATCCAAGATCGTTATAGACCCAACGAATTAGTAGTTCCCAACCGCGGGTGGAGTGAAATCCAACAAAAAAATCAGTAACTAAAAGAATAAAAAAAGCTTTTACTGAGTCATTTAAGTTATAGAAGAATTCCTGAACCCAAGAATTCAAAATAACAAGTTCCTCTTTACCCAGAAAAAAAGAACCACTTAGAATAGCCAAACAGATTATATTTGTCGAGAAATGCAAAATGATATGGAGATGACCCTCATTATCTATTTTGGCCAATTGTATTATTTCCTTGCGTATTCCTATAGGGGGGTTTTGTACATGTGTATTCGGTTTCTCTTTTATCATTTCGTCCAAGATAAAAAGGTCTTCTAATTCCATGAATCTTTCTAGAACTCTTTTCTCTTGAATAGCAGTTAAGAGAGTTTGGGATTGCCTGGTATTCCACCAATTCTTAATCCAAAGTTCCAGACATTTGTTAAAAGAGAAAGAGACTCCCCAAGGCAAAAGTACGATAAATACAAGATATAGGAAAGAAGGCAATGCTTTCTTTTTTTTCATTTTTGATCTGTAAATTGAGTTGTTAATGAATCCGCTTTATTCGCTGACTCTATATGATATTTCTTTTTCTTTGAAGGAAAAAATCTATAACAAGGTTTGAGACCTTGTATCTATTCCTCTTTTTTCTATACTAGTAGAATTTCATTGCATTGAGTTCTTTCTTAGATCTAGATGGAGTGGAATAGAGAAATAGAAAAAAGTCCTTTCGGATGAAAATGGAAGAATATTACGCCATATATCCCACTTGGACAAATTAGAAGCAATTTTCTCTTATCCTCATTTGTTCCTTCCTTTAGATAAATACTCAAAATCCCCTTACAATAATGCAATTTCGAAGGGACCTTTTCCCTCGTGTTGAGAAAACTTTTCTTCTTCCAATTCTTCTTCATTCAATTCATTTCAAAAAATTCAATTGGTACTCAAAATACTTCCATTGGTATGCGCAAGAAATAAGCCAATTCGGCAGCTTTTTGTTCAATTTCTCGTGGAGTAAAAAACTTCTCATCAGTACGAGTCAAGGGAATGGCCCCCTGGCCCCAGATTTCCATATAAAGGATACGACGAGGAAAAAGACCTTCTTTAACCTGAATTCTAATTGATTGGATATCCCGCATAAGGAATCGAAGGAAGACGCGACGTTTTATTCCAGGGAATCCCCAACGAAAAATGCACACTACTCCCTCTTTTCTATCGAATCGGTCATAACCACTGCCTACATTCCACAAAATAGTGCACCACAAGTAAGCGCTAATGAATAGGCCTGCGATTCCGTAGAAAGACATCACGACCCCCTGTGGAAAAAAAGGAATTTGTTGAGATGGAAGTACAGATATAATATTCTTACCAAGATAACTGGAAGCCCCAACCGCTAAGAATCCTAGTGAACCTAGAAAAAGAATACAGGCCCAGAAAAAATTACCTCTTTTTCGAGAACCTTTTAGAAGTTCTATCCATATGTGTTCTGATCGCCAATTCAT
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| CDS seq | ATGAATTGGCGATCAGAACACATATGGATAGAACTTCTAAAAGGTTCTCGAAAAAGAGGCAGTGGTTATGACCGATTCGATAGAAAAGAGGGAGTAGTGTGCATTTTTCGTTGGGGATTCCCTGGAATAAAACGTCGCGTCTTCCTTCGATTCCTTATGCGGGATATCCAATCAATTAGAATTCAGGTTAAAGAAGGTCTTTTTCCTCGTCGTATCCTTTATATGGAAATCTGGGGCCAGGGGGCCATTCCCTTGACTCGTACTGATGAGAAGTTTTTTACTCCACGAGAAATTGAACAAAAAGCTGCCGAATTGGCTTATTTCTTGCGCATACCAATGGAACAAGGTTATGAAAACCCACGAGAAGCAACTGGACGAATTGTATGTGCCAATTGCCATTTAGCGAATAAGCCTGTGGATATTGAAGTTCCCCAAGCAGTGCTTCCCGATACTGTATTTGAAGCAGTTCTTCGAATTCCTTATGATATGCAACTGAAACAAGTTCTTGCTAATGGGAAAAAGGGAGGGTTGAATGTGGGTGCTGTTCTTATTTTGCCCGAGGGATTCGAATTAGCGCCGCCCGACCGTATTTCTCCTGAGTTGAAAGAAAAGATAGGAAATCTCTCTTTTCAGAGTTATCGTCCCAATAAAAAAAATATTCTTGTGATAGGCCCTGTTCCCGGTAAGAAATATAGTGAAATCGTCTTTCCCATTCTTTCCCCCGACCCTGCTATGAAGAAAGACGTTCATTTCTTAAAATATCCCATATATGTGGGGGGAAACCGAGGAAGGGGACAGATCTATCCTGATGGTAGCAAGAGTAACAATACGGTCTATAATGCAACGTCAACAGTTGTAGGTTCAGGAATTGTTAAATTTAGATATAGGACCCTAGAGGACGAATATAGGACTCGAGAGAAAGACTCAGAGAACGAATACGGGAGCCCAGAAAACGAATATAGGACCCGAGAGGAAGAATGTAAAACCCTAGAAGACGAATATAGGACTCGAGAGGAGGAGTATGAAACCCTAGAAGATGAATATGGGATCCCAGAGAACGAATATGAAACCCTAGAAGATGAATATGGAATCCTAGAGGACGAATATAGGACTCGAGAGGAGGAATCCGAGGACGAATATGGGAGTCCAGAGAACAAATATAGGCCCCGAGAGGATAAATATGGCACTTTAGAGGAAGACTCAGAGGACGAACATGGGACTTTAGAGGAAGACTCAGAGGAAGACTCAGAGGACGAATATGGGAACCCGGAGGAAGATTCCGTCTTAAAAAAGGGGGTTTTGATTGAGCATCGAGGAACAAAAGAATTTAGTCTAAAATACCAAAAAGAAGTAGATCGGTTTTTTTTCATTCTCCAAGAACTGCATATCTTGCCGAGATCCTCATCCCTAAAGGTACTTGACAATAGTATTATTGGAGTGGATACACAACTCACAAAAAATACAAGAAGTCGGCTGGGTGGATTGGTTCGAGTGAAGAGAAAAAAAAGCCATACGGAACTAAAAATCTTTTCTGGAGATATTCATTTTCCTGAAGAGGCGGATAAGATATTAGGTGGCAGTTTGATACCACTAGAAAGAGAAAAAAAAGATTCGAAGGAATCAAAAAAAAGGGAAAATTGGGTCTATGTTCAGTGGAAAAAAATTCTCAAGAGCAAGGAAAAGTATTTTGTTTTGGTTCGACCTGCAGTCGCGTATGAAATGAACGAAGGGAGAAATTTAGCAACACTTTTCCCACAGGATCTCTTGCAGGAAGAGGCTAAGCCTTATTTGGCCACTACAGGAGCAACTGTTCATGGTCATTATGGAGAAATCCTTTACAAAGGGGATAGGAGAATTGAGGATTGGAATGACTTCTCCTTTTTTGCTATGGGAGCTTGTACTATTACTGGTGGAATGTTCAGTACGGATTCCTATAGTACTGTTCGGGGAGTTGATAAGTTAATTCCTGTGGACGTCTACTTGCCGGGTTGCCCACCTAAACCAGAGGCTGTTATAGATGCCCTAACAAAACTTCGTAAGAAGATATCGCGAGAAATAGTTGAGGATCGAACTCTATCTCAAAAGAAAAATCGATGTTTTACTACCAACCACAAGCTTTATGTTCGGCGCAGTACTAATACTGGAACTTATGAGCAAGAATTGCTCTATCAATCACCATCTACTTTAGACATATCTTCTGAAACTTTTTTCAAATCCAAAAGTCCAGTATCTTCCTACAAATTAGTGAATTAG
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| Protein seq | MNWRSEHIWIELLKGSRKRGSGYDRFDRKEGVVCIFRWGFPGIKRRVFLRFLMRDIQSIRIQVKEGLFPRRILYMEIWGQGAIPLTRTDEKFFTPREIEQKAAELAYFLRIPMEQGYENPREATGRIVCANCHLANKPVDIEVPQAVLPDTVFEAVLRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELAPPDRISPELKEKIGNLSFQSYRPNKKNILVIGPVPGKKYSEIVFPILSPDPAMKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNATSTVVGSGIVKFRYRTLEDEYRTREKDSENEYGSPENEYRTREEECKTLEDEYRTREEEYETLEDEYGIPENEYETLEDEYGILEDEYRTREEESEDEYGSPENKYRPREDKYGTLEEDSEDEHGTLEEDSEEDSEDEYGNPEEDSVLKKGVLIEHRGTKEFSLKYQKEVDRFFFILQELHILPRSSSLKVLDNSIIGVDTQLTKNTRSRLGGLVRVKRKKSHTELKIFSGDIHFPEEADKILGGSLIPLEREKKDSKESKKRENWVYVQWKKILKSKEKYFVLVRPAVAYEMNEGRNLATLFPQDLLQEEAKPYLATTGATVHGHYGEILYKGDRRIEDWNDFSFFAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDALTKLRKKISREIVEDRTLSQKKNRCFTTNHKLYVRRSTNTGTYEQELLYQSPSTLDISSETFFKSKSPVSSYKLVN |
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| Function | DNA-directed RNA polymerase subunit beta'' [UniProtKB/Swiss-Prot:P0C508] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_02g0015510 | OsAzu_02g0015510.01 | Chr02 | 14433702 | 14440646 | - | NAM | ||
| CDS seq | ATGAATTGGCGATCAGAACACATATGGATAGAACTTCTAAAAGGTTCTCGAAAAAGAGGCAGTGGTTATGACCGATTCGATAGAAAAGAGGGAGTAGTGTGCATTTTTCGTTGGGGATTCCCTGGAATAAAACGTCGCGTCTTCCTTCGATTCCTTATGCGGGATATCCAATCAATTAGAATTCAGGTTAAAGAAGGTCTTTTTCCTCGTCGTATCCTTTATATGGAAATCTGGGGCCAGGGGGCCATTCCCTTGACTCGTACTGATGAGAAGTTTTTTACTCCACGAGAAATTGAACAAAAAGCTGCCGAATTGGCTTATTTCTTGCGCATACCAATGGAACAAGGTTATGAAAACCCACGAGAAGCAACTGGACGAATTGTATGTGCCAATTGCCATTTAGCGAATAAGCCTGTGGATATTGAAGTTCCCCAAGCAGTGCTTCCCGATACTGTATTTGAAGCAGTTCTTCGAATTCCTTATGATATGCAACTGAAACAAGTTCTTGCTAATGGGAAAAAGGGAGGGTTGAATGTGGGTGCTGTTCTTATTTTGCCCGAGGGATTCGAATTAGCGCCGCCCGACCGTATTTCTCCTGAGTTGAAAGAAAAGATAGGAAATCTCTCTTTTCAGAGTTATCGTCCCAATAAAAAAAATATTCTTGTGATAGGCCCTGTTCCCGGTAAGAAATATAGTGAAATCGTCTTTCCCATTCTTTCCCCCGACCCTGCTATGAAGAAAGACGTTCATTTCTTAAAATATCCCATATATGTGGGGGGAAACCGAGGAAGGGGACAGATCTATCCTGATGGTAGCAAGAGTAACAATACGGTCTATAATGCAACGTCAACAGTTGTAGGTTCAGGAATTGTTAAATTTAGATATAGGACCCTAGAGGACGAATATAGGACTCGAGAGAAAGACTCAGAGAACGAATACGGGAGCCCAGAAAACGAATATAGGACCCGAGAGGAAGAATGTAAAACCCTAGAAGACGAATATAGGACTCGAGAGGAGGAGTATGAAACCCTAGAAGATGAATATGGGATCCCAGAGAACGAATATGAAACCCTAGAAGATGAATATGGAATCCTAGAGGACGAATATAGGACTCGAGAGGAGGAATCCGAGGACGAATATGGGAGTCCAGAGAACAAATATAGGCCCCGAGAGGATAAATATGGCACTTTAGAGGAAGACTCAGAGGACGAACATGGGACTTTAGAGGAAGACTCAGAGGAAGACTCAGAGGACGAATATGGGAACCCGGAGGAAGATTCCGTCTTAAAAAAGGGGGTTTTGATTGAGCATCGAGGAACAAAAGAATTTAGTCTAAAATACCAAAAAGAAGTAGATCGGTTTTTTTTCATTCTCCAAGAACTGCATATCTTGCCGAGATCCTCATCCCTAAAGGTACTTGACAATAGTATTATTGGAGTGGATACACAACTCACAAAAAATACAAGAAGTCGGCTGGGTGGATTGGTTCGAGTGAAGAGAAAAAAAAGCCATACGGAACTAAAAATCTTTTCTGGAGATATTCATTTTCCTGAAGAGGCGGATAAGATATTAGGTGGCAGTTTGATACCACTAGAAAGAGAAAAAAAAGATTCGAAGGAATCAAAAAAAAGGGAAAATTGGGTCTATGTTCAGTGGAAAAAAATTCTCAAGAGCAAGGAAAAGTATTTTGTTTTGGTTCGACCTGCAGTCGCGTATGAAATGAACGAAGGGAGAAATTTAGCAACACTTTTCCCACAGGATCTCTTGCAGGAAGAGGCTAAGCCTTATTTGGCCACTACAGGAGCAACTGTTCATGGTCATTATGGAGAAATCCTTTACAAAGGGGATAGGAGAATTGAGGATTGGAATGACTTCTCCTTTTTTGCTATGGGAGCTTGTACTATTACTGGTGGAATGTTCAGTACGGATTCCTATAGTACTGTTCGGGGAGTTGATAAGTTAATTCCTGTGGACGTCTACTTGCCGGGTTGCCCACCTAAACCAGAGGCTGTTATAGATGCCCTAACAAAACTTCGTAAGAAGATATCGCGAGAAATAGTTGAGGATCGAACTCTATCTCAAAAGAAAAATCGATGTTTTACTACCAACCACAAGCTTTATGTTCGGCGCAGTACTAATACTGGAACTTATGAGCAAGAATTGCTCTATCAATCACCATCTACTTTAGACATATCTTCTGAAACTTTTTTCAAATCCAAAAGTCCAGTATCTTCCTACAAATTAGTGAATTAG
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| Protein seq | MNWRSEHIWIELLKGSRKRGSGYDRFDRKEGVVCIFRWGFPGIKRRVFLRFLMRDIQSIRIQVKEGLFPRRILYMEIWGQGAIPLTRTDEKFFTPREIEQKAAELAYFLRIPMEQGYENPREATGRIVCANCHLANKPVDIEVPQAVLPDTVFEAVLRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELAPPDRISPELKEKIGNLSFQSYRPNKKNILVIGPVPGKKYSEIVFPILSPDPAMKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNATSTVVGSGIVKFRYRTLEDEYRTREKDSENEYGSPENEYRTREEECKTLEDEYRTREEEYETLEDEYGIPENEYETLEDEYGILEDEYRTREEESEDEYGSPENKYRPREDKYGTLEEDSEDEHGTLEEDSEEDSEDEYGNPEEDSVLKKGVLIEHRGTKEFSLKYQKEVDRFFFILQELHILPRSSSLKVLDNSIIGVDTQLTKNTRSRLGGLVRVKRKKSHTELKIFSGDIHFPEEADKILGGSLIPLEREKKDSKESKKRENWVYVQWKKILKSKEKYFVLVRPAVAYEMNEGRNLATLFPQDLLQEEAKPYLATTGATVHGHYGEILYKGDRRIEDWNDFSFFAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDALTKLRKKISREIVEDRTLSQKKNRCFTTNHKLYVRRSTNTGTYEQELLYQSPSTLDISSETFFKSKSPVSSYKLVN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_02g0015510 | OsAzu_02g0015510.02 | Chr02 | 14438322 | 14440643 | - | IsoSeq | ||
| CDS seq | ATGAAAAAAAAGAAAGCATTGCCTTCTTTCCTATATCTTGTATTTATCGTACTTTTGCCTTGGGGAGTCTCTTTCTCTTTTAACAAATGTCTGGAACTTTGGATTAAGAATTGGTGGAATACCAGGCAATCCCAAACTCTCTTAACTGCTATTCAAGAGAAAAGAGTTCTAGAAAGATTCATGGAATTAGAAGACCTTTTTATCTTGGACGAAATGATAAAAGAGAAACCGAATACACATGTACAAAACCCCCCTATAGGAATACGCAAGGAAATAATACAATTGGCCAAAATAGATAATGAGGGTCATCTCCATATCATTTTGCATTTCTCGACAAATATAATCTGTTTGGCTATTCTAAGTGGTTCTTTTTTTCTGGGTAAAGAGGAACTTGTTATTTTGAATTCTTGGGTTCAGGAATTCTTCTATAACTTAAATGACTCAGTAAAAGCTTTTTTTATTCTTTTAGTTACTGATTTTTTTGTTGGATTTCACTCCACCCGCGGTTGGGAACTACTAATTCGTTGGGTCTATAACGATCTTGGATGGGTTCCTAACGAGCTAATTTTCACTATTTTTGTTTGTTGTTTTCCTGTGATTCTAGATACATGTTTGAAATTTTGGGTCTTTTTTTGTTTAAACCGCCTATCTCCTTCGCTTGTCGTCATTTATCATTCAATTAGTGAA
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| Protein seq | MKKKKALPSFLYLVFIVLLPWGVSFSFNKCLELWIKNWWNTRQSQTLLTAIQEKRVLERFMELEDLFILDEMIKEKPNTHVQNPPIGIRKEIIQLAKIDNEGHLHIILHFSTNIICLAILSGSFFLGKEELVILNSWVQEFFYNLNDSVKAFFILLVTDFFVGFHSTRGWELLIRWVYNDLGWVPNELIFTIFVCCFPVILDTCLKFWVFFCLNRLSPSLVVIYHSISE
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 87.976479 | 35.859432 | 142.920792 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0423484 | SBH | 1.186243 | 0.0 | 2.620930 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g24604 | RBH | 55.268616 | 48.546970 | 10.743213 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0423484 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0006810 | SBH | 3.078001 | 0.428342 | 4.502482 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0015650 | RBH | 10.978106 | 19.987053 | 14.325867 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0015550 | RBH | 33.013920 | 0.475163 | 49.047176 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0015390 | SBH | 5.522130 | 0.791962 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0013720 | SBH | 1720.075439 | 40.556133 | 797.819580 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0013210 | SBH | 29.654196 | 1.836470 | 11.212577 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0201700 | SBH | 0.376647 | 0.037695 | 0.072254 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0013730 | SBH | 23.575542 | 4.081563 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0013670 | SBH | 3.457268 | 50.889935 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0013380 | SBH | 177.761993 | 300.369934 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0019820 | RBH | 235.040909 | 0.0 | 121.790993 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0013510 | SBH | 13.419702 | 56.295811 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
