Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_10g0018310 | OGI:10063120 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr10:21985552-21991075 | ||||||||
| Gene Symbol | GSTU50, OsGSTU50 | ||||||||||
| DNA seq | ATGGCTGAGGAGCTGAAGCTGCTGGGGTCGTTGTCCGGCGTGAGCCCGTACGTGATCCGCGCGCAGATGGCGCTCGCCGTCAAGGGCTTGGCGCACGACTACCTCCCCGAGGACCTCACCCGCAAGAGCAAGCTCCTCCTCGACAGCAACCCGGTGCACAAGTCGGTGCCCGTGCTCATCCACAACGGCAAGCCGGTGTGCGACTCGCTGGTCATCGTCGAGTACGTCGACGAGGCGTTCCCCGGCGGCGCCGCCGCGCTGCTCCCCGCCGACCCCTACCACCGCGCCGTCGCTCGCTTCTGGGCCGCCTTCATCGACAGCAAGGTGTTCCCTCCGTGCCTTGCCATTCTGAAGACGGCGGCGGCGGAGGCGGAGGAGGAGAAGGCGGCGAAGGTGAAGGAGACGGTCGAGGCGCTCCAGCTCGTGGAAGGGGCCTTCGGTGAGTGCTCCAAGAGGAAGCCGTTCTTCGGCGGCGACGCCGTCGGGTACCTCGACGTCGTGCTCGGGTGCTACCTGTGCTGGTTCGAGGGGGTAAGCGAGATCGCTGGCGGTGTGTCGCCGCCGCTCCTCGACGCGTCGAGGACGCCGCAGCTGGCCGCGTGGGCGGCGCGCTTCAGATCAGCGGCCGATGCAGTCGGATGCTCGGTTCCTCGGGTGGACAAGGTTGAGGCTTACCTCAACAACGTGCTCAAGCCGAAGTGGAGTGCCGCCGCCGCGGCGTCCAGCCATTAAAATTCCAATCCGTATTTGTATTTTGAAAAGTTTTTGAGCGTACCGTCGAGTACGTTATTGACGGCAGGAAAATGCCAAGAGTTGGACGTACTACTGCTATGAATTATTATTTCAGTGGATTATAGAATCTTGAACACGCGACCTGTCTCTGCTACAAATTGAGATCCTCTGGTTTACTGAAGCTATAAGTAGAGGTGCTACAGATCTATCTGAACTGTTCGATGTACACTTGTACAGTGAGCGGATCAGACTTATCGGTACAGTATTTGTTGATAGCTCCAGTGGTACTATTATATAGTTGGGCCGGTCAGAAATGAACTTCGACGGCGACGGTCCATTATATTTGGGCCTGAACAGGATAGCGCCAGATGTGCGGCCCATATTAGTTGGGCTTGAATGGGATTGCGACTGATGTGCGGCCCATATTAGTTGGGCCGGGAATGTAGTTTCTTCGAGTTGGGCATTTGGCGGCCAATTGTACCACCAACTGCATACCGATGGAGCGCGCATCTACGCACGCATGATCGAATGCATGATATTGCTAAAGTGGCAATCAACATCAAATTCATTTTTCCAACACTGTAAAACCTTTAATATCCTCCTTGATTATCTTAGCAACCGAATAAAAACCAATCAAGGAATCTACTTACGTGAGCACAGTGCAGACAAATGCAACCAAGAAGAGAAGCTAATCCTATGCTACCAACTACAGGCTTCCGGCCTTTTTCTTTTCATTCTTTATTTTTTCCTTTGCATGTTCTACAACAAGCGTGACCCGCGCTAGCTTGTTCTAATTTCTAAATGTAATAGTAATGTATAGGCGTGGCCTAATCTGTTTCATTTTTTTTCATCAGCGATTAAGTTATAACTGGTGGTCCTGCATTGTTTACCCTCCCGCTCCCGATCCCCACCTGATTCGCCGGTCTATTAACGGTCAAGTTTGTTCGGGCTTTGGAATGGACGAAGGTCATTGCGCCGCGTAGCACAAAACAAAATTTCCCGAAGGTGACAGCAGCACATCACATTCCGACGTAAGAGTAACAACCTACCTACCGGAGCACTACTCAAGCTATTATATATGTCCACTCACTCGATTCCTTCGACCAAAAAAATTCAACCACCTTATCTATCCGTCTCAAAAAAAAAATCATGACCGATCGAATGAATGCGTACCACCACACGAAATTAAAAGATCAGTATAAAATCAAAATGAATTGGCAAAGCGCTTGGCAAAATCCAATCAAATTCTGTCCTCTCCTGCGAACCAAAGAGAGCTTGGCAACATGGTGGTTGGGGCAGGAGGAGGAGACGAGCTCAAGTTGCTGGGCGTGTGGGATAGCCCGTACGTGAACAGGGTGCAGATCGTGCTCAACCTCAAGGGCCTGAGCTACGAGTACGTCGAGGAGGATCTCATGAACAAGAGCGACCTCCTCCTCGGCTCCAACCCGGTGCACAAGAAGGTCCCCGTGCTCATCCACAACGGCAAGCCCATCGCCGAGTCGCGGGTCATCGTGGAGTACCTCGACGAGGCCTTCGCCGCCGGCGCCGGCGGCAGCACGGGCGCCTCCGTCCTCCCCTCCGACCCCTACGAGCGCGCCGTCGCCCGCTTCTGGGCCGCCTACGTCGACGACAAGGTGGGGTCACCGTGGTACACGATCCTGTTCGCCCGGGAGAGGGGGGAGAAGGTGGAGGCGGCGGCGCGGGCCATCTCGGCGCTGGAGACGGTAGAGGCAGGCGCGTTCAGGGATCGCTCCTCCGAGGGGAAGACGACAAACGCAGCGGCGGCGCCGTTCTTCGGCGGCGACAGCATCGGGTTCGTCGACGTGGTGCTCGGCAGCTACCTGGGGTGGTTCAGGGTGATCGAGAAGATGATCGGCGTCAGGATCATGGACGCGGCGAGGACGCCGCGGCTGGCAGCGTGGGCGGAGCGGTTCGAGGCGGCGGACGCCGTGAGGGGCGTCCTCCCCGACGACGTCGACAAGGTGATCAACTTCTTGCAGGCGTGTTCGTGTACTCGTGTTGGTGTTCTGCTGTCAACGGCTTGGATTGCTCTGTTCCGTTTACTGTGTAGGGCTGGTAAAAATGTCCCATCGTGTTTCGTGTATCTTGGCCCTAACGGAATTTTATCGTTGTGAATAAGTAGGCCTGAATTGTGCAGGCTTCAATAACTGATGGGCGAATTTGTCATGATGAATTGGGTCAGACCAGCGAGGAATAAGTTCAACTAACGTGCCTCAATTGTACGCTGAGTCTGTATGTGGTCTCCTAACCGCAATACCAAAAATGTGTATCCCTTAACTATGTAAAATTATTTAAAAAAGGTCTTGAGACAGTAGAGATACCTGGTTTCGCTGACGTGGCATCCTAATCAGAAAAAAAAAATGTGCGGCCCACATGTAAGTGAGAAGAAAAAATTCGGGTCAGCAATCCTCTTCAATTTTCTTTTTTCTCTTCTTCTCTTTCATTTTTGTGTTTGCCCCAGAGGGGGAGCGGCAGCGAGCGACGACGCGTGGCTGAAACAGGCGGAGCGTCCGCGTCGGCGGGCGAGCGGCAGCTCCCGGCGCGGGTAGAGCAGAGGGGCGGGGGACGCGGGGGGGCACAGCGGGCGAGCAGCAATGGGCGAGATGTCGACGTCAAGACCGCTCTAGCTACGCCGCCTTGTGCCAGCGCTCCTCTTGCTCGTGTATGTCATTGCGAGAAGGAGCGCCCCCTCACCCCCCTTGTCTTCTCGTTGGCCCCTCGCCTCCCTTCTCTTCTCGATCGGGCTCGTCGGCCGCCGCGCCCCCCGCTTCCCCCGCCCCTTTGCTTCGCCCGTGCCCGGAGCCGCGCTTGCCCGCCGCAGCCGACGCTCCGCCTGCTCCAGCCACATGCCGCCCCGCTACCGCTCCCCGTCTGCGGCAAACACAGAAATGAAGAGAAGAGAAAAAAGAAAATTGAAGAAGATTGCTGATCCTATAGTTTTTCTTCTCACTTATATATGGGTCCTACATATTTATTTATTTATTTATATACTAGGATATCACGTCAGCGAAACCAGGCATCTATACTGTCTAGAGATATTTTTTGAACGGTTTTATATAGTTAAGGATATAAAATATAGTTAAGGGTATATATTTTTATGGTTTGGGGATCTTAGACAGACTCGTGTACAAGTGAGGAACGTCAAGTAAACTTATTCCGATAAGCAATGACGCCAATAATATTTGGGCTTTGAACGGGGACTGTGATGTGCTTGCGGGCCACAATTTTTGTGTAGGACGTGAAGGTCATCGAGCCGTCTCTGTTATGCTGACCGGTGACCAGTTGCCGCTAATCAGTGACGCAGAGTCACAAATGAACACCATGGCCAGGAGCGCCCTTTTCCGTTGAATGAGAGTGCGTTATACAGAAGAGGAAGGAATCATGTCATCATGTGCGCACTAATCTCTGAGTTAGTGACAAATTGTTGAGCTAAATTGTGCCCTTCGCACGGAACGAAAGGGCCACGAAAGAGAACATTGAAGACATATGTACCTTTCTCCACATTTTCTAAAGAGAAACAAGATTCTCAATGACATGCTGCTAAATGGTGTGGCTGCTAACAATCGTTCTCCCTCTCCTCTATTATGGCTGCTGCTACTACTTCCCTTTCAACAAACAGTGCATGATTCTTTTCAACAGTACAGGCGTTTCATCCAGCCGCCTATATCTCCAAATATCTTCCGTTAAACAGTCATTTGTACTAGTAAACTGAACCCAAAAAAACAGCACGCACTAGCACAGAGGCCTCTAGCAGCCAGCTACTCCAGTCTTGTTGCCACGAGGCAAAATTATCGTCCTAATAAACAAAAACAAAAGGGAGGAAAGAACTTGACCTTCTCCATCATCAGTGACGACCATGCTCGCGACATCAACCGATCAGCTTGGTTCGAAGAACGCTCTCATTACCATCAAGCTGGCCAGGTTCATCGGTACAAGTCTGTCATATCCGGCTATATAACGCCATGGCCAGAGTCGTATAACGTCATAAGCAAACCAAACAAAAAAACCTCACCATCATCGACCCACTTGTTCCTAGCGATCTAGAACGAGAGACTTGGCAATGGCGGGAAGCGGCGAGCTGAAGCTGCTGGGCGTTTGGAGCAGCCCGTACGCGATCAGGGTCCGCGTCGTCCTCAACCTCAAGTCGCTGCCGTACGAGTACGTGGAGGAGAACCTGGGCGACAAGAGCGACCTCCTCCTCGCCTCCAACCCGGTGCACAAGAGCGTCCCCGTCCTGCTCCACGCCGGCCGGCCGGTGAACGAGTCGCAGGTCATCGTGCAGTACATCGACGAGGTCTGGCCGGGCGGCGCCGGGGGACGCCCGTCCGTGATGCCCTCTGACCCCTACGAGCGCGCGGTGGCGCGCTTCTGGGCCGCTTACGTCGACGACAAGGTCCGGCCGGCGTGGCTGGCCATCCTGTTCGGGAGCAAGACGGAGGAGGAGAGGGCGGCGGCGGTGGCGCAGGCCGTGGCGGCGCTGGAGACGCTAGAGGGCGCGTTCGGGGAGTGCTCCAAGGGGAAGCCGTTCTTCGGCGGCGACGGCGTCGGGTTCGTCGACGTCGTGCTCGGCGGCTACCTCGGGTGGTTCACGGCGATCGACAAGCTGATCGGTCGCAGGCTGATTGACCCGGCGAGGACGCCGGCGCTGGCCGCGTGGGAGGAGCGGTTCCGCGCCACCGACGCGGCCAAGGGAGTCGTGCCGGATGACGCCGACAAGCTGCTCGAGTTCAGGCAGACCCTGCTTCGCTGGAGCGCATCCAAAGCAAAGTGA
More
|
||||||||||
| CDS seq | ATGGCGGGAAGCGGCGAGCTGAAGCTGCTGGGCGTTTGGAGCAGCCCGTACGCGATCAGGGTCCGCGTCGTCCTCAACCTCAAGTCGCTGCCGTACGAGTACGTGGAGGAGAACCTGGGCGACAAGAGCGACCTCCTCCTCGCCTCCAACCCGGTGCACAAGAGCGTCCCCGTCCTGCTCCACGCCGGCCGGCCGGTGAACGAGTCGCAGGTCATCGTGCAGTACATCGACGAGGTCTGGCCGGGCGGCGCCGGGGGACGCCCGTCCGTGATGCCCTCTGACCCCTACGAGCGCGCGGTGGCGCGCTTCTGGGCCGCTTACGTCGACGACAAGGTCCGGCCGGCGTGGCTGGCCATCCTGTTCGGGAGCAAGACGGAGGAGGAGAGGGCGGCGGCGGTGGCGCAGGCCGTGGCGGCGCTGGAGACGCTAGAGGGCGCGTTCGGGGAGTGCTCCAAGGGGAAGCCGTTCTTCGGCGGCGACGGCGTCGGGTTCGTCGACGTCGTGCTCGGCGGCTACCTCGGGTGGTTCACGGCGATCGACAAGCTGATCGGTCGCAGGCTGATTGACCCGGCGAGGACGCCGGCGCTGGCCGCGTGGGAGGAGCGGTTCCGCGCCACCGACGCGGCCAAGGGAGTCGTGCCGGATGACGCCGACAAGCTGCTCGAGTTCAGGCAGACCCTGCTTCGCTGGAGCGCATCCAAAGCAAAGTGA
More
|
||||||||||
| Protein seq | MAGSGELKLLGVWSSPYAIRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKVRPAWLAILFGSKTEEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAAKGVVPDDADKLLEFRQTLLRWSASKAK |
||||||||||
| Function | Probable glutathione S-transferase GSTU6 [UniProtKB/Swiss-Prot:Q06398] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_10g0018310 | OsARC_10g0018310.01 | Chr10 | 21985552 | 21991075 | + | NAM | ||
| CDS seq | ATGGCGGGAAGCGGCGAGCTGAAGCTGCTGGGCGTTTGGAGCAGCCCGTACGCGATCAGGGTCCGCGTCGTCCTCAACCTCAAGTCGCTGCCGTACGAGTACGTGGAGGAGAACCTGGGCGACAAGAGCGACCTCCTCCTCGCCTCCAACCCGGTGCACAAGAGCGTCCCCGTCCTGCTCCACGCCGGCCGGCCGGTGAACGAGTCGCAGGTCATCGTGCAGTACATCGACGAGGTCTGGCCGGGCGGCGCCGGGGGACGCCCGTCCGTGATGCCCTCTGACCCCTACGAGCGCGCGGTGGCGCGCTTCTGGGCCGCTTACGTCGACGACAAGGTCCGGCCGGCGTGGCTGGCCATCCTGTTCGGGAGCAAGACGGAGGAGGAGAGGGCGGCGGCGGTGGCGCAGGCCGTGGCGGCGCTGGAGACGCTAGAGGGCGCGTTCGGGGAGTGCTCCAAGGGGAAGCCGTTCTTCGGCGGCGACGGCGTCGGGTTCGTCGACGTCGTGCTCGGCGGCTACCTCGGGTGGTTCACGGCGATCGACAAGCTGATCGGTCGCAGGCTGATTGACCCGGCGAGGACGCCGGCGCTGGCCGCGTGGGAGGAGCGGTTCCGCGCCACCGACGCGGCCAAGGGAGTCGTGCCGGATGACGCCGACAAGCTGCTCGAGTTCAGGCAGACCCTGCTTCGCTGGAGCGCATCCAAAGCAAAGTGA
More
|
|||||||
| Protein seq | MAGSGELKLLGVWSSPYAIRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKVRPAWLAILFGSKTEEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAAKGVVPDDADKLLEFRQTLLRWSASKAK
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_10g0018310 | OsARC_10g0018310.02 | Chr10 | 21987555 | 21988617 | + | IsoSeq | ||
| CDS seq | AGCTTGGCAACATGGTGGTTGGGGCAGGAGGAGGAGACGAGCTCAAGTTGCTGGGCGTGTGGGATAGCCCGT |
|||||||
| Protein seq | SLATWWLGQEEETSSSCWACGIAR |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.262351 | 0.302766 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0530900 | RBH | 3.695326 | 5.594304 | 4.876844 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g38740 | RBH | 1.105041 | 1.740030 | 0.606456 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0530900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0017990 | RBH | 1.329786 | 37.525990 | 3.639706 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0018370 | RBH | 0.150370 | 26.990034 | 10.246747 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0017760 | RBH | 1.341098 | 92.994720 | 11.655051 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0018330 | RBH | 0.143922 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0018060 | RBH | 2.051465 | 41.352917 | 11.296227 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0340200 | RBH | 7.3856285 | 10.150049 | 8.5710735 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0017960 | RBH | 0.065370 | 5.175228 | 0.387508 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0364500 | RBH | 5.065024 | 0.9477255 | 0.154147 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0017710 | RBH | 0.301152 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0017550 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0018190 | RBH | 0.000000 | 18.895678 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0017750 | RBH | 0.111776 | 0.0 | 1.924476 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0018280 | RBH | 0.135487 | 13.251351 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G017930 | RBH | 0.257026 | 8.717345 | 7.353987 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0018070 | RBH | 0.456091 | 29.875797 | 7.862017 |
