Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_09g0010230 | OGI:09043810 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr09:16058156-16059714 | ||||||||
| Gene Symbol | DLN231, R2R3-MYB, OsDLN231, OsMYB108, MYB108, OsMYB31, MYB31 | ||||||||||
| DNA seq | atggggaggccgccgtgctgcgacaaggtcggggtgaagaaggggccatggacgccggaggaggacctgatgctggtctcctacatccaggagcacggcgccggcaactggcgcgccgtgccgacgaacaccggtgcgtgttcttgcgttcttgatcgatcgatcggcgagagatccgagatttttgttttcatctgtgcgcgtcgcgtgtgcagggctgatgcgttgcagcaagagctgccggctccggtggacgaactacctcaggccggggatcaagcgggggaacttcaccgagcaggaggagaagctcatcgtccacctccaggctctcctcggcaaccggtgatttcttcttggtttttcatggtttgctttgattgatttgtccatggcgtccatggctgatgagtgggttgctggctgtgtaggtgggcagcgatagcgtcgtacttgccggagaggacggacaacgacatcaagaactactggaacacgcacctcaagaagaagctcaagaagatgcaggccgccggaggtggggaagacggcggcgccgcctcggagggtggcggcggccgcggcgacggcgacggcggcgggaaaagcgtgaaggccgccgcacctaaggggcagtgggagcggcggctgcagacggacatccacacggcgcggcaggcgctgcgcgacgcgctctcgctcgaccaccccgacccgtcgccggcgacggcggcggcggcggcgacgccagcggggtcgtcggcggcgtacgcgtcgagcgcggacaacatcgcgcggctgctgcagggctggatgcgcccgggcggcggcggcggcggcaacggcaagggccccgaggcgtcggggtcgacctccacgacggcgacgacgcagcagcagccgcagtgctccggcgagggcgcggcatccgcgtccgcgtcggcgagccagagcggcgccgccgccgcggcgactgcccagacgccggagtgctcgacggagacgagcaagatggccaccggcggcggcgccggcggccccgcgccggcgttctcgatgctggagagctggctgctcgacgacggcggcatggggctcatggacgtggtgccattgggggaccccagtgagttcttttaagtgtagtacaaccaaaattaaattaatcaagtagacagcaagaacaaaaaaaaataatggaaagttgccgagttaattaatcaagatgcaactaatcaaagctaattaaaagggcttcgagttaattctcggtgatttaaatcgagtttgcaggtgttgatctagcttggttaattaatcctttcttttgtaggtttttagttaattagtctctctgatgatgctagggtttggaactgatcatatgtaagttaatttatactaatggtaggcctgtgacttgtgattagttagtcctgagtggataaataaagacataaatgtacatctttttaaaagatatatatgtgtatagatgttacagtttattaattttactatacatcgtgtcttgtttcccctaattaattttctgagaa
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| CDS seq | atggggaggccgccgtgctgcgacaaggtcggggtgaagaaggggccatggacgccggaggaggacctgatgctggtctcctacatccaggagcacggcgccggcaactggcgcgccgtgccgacgaacaccggtgcgtgttcttgcgttcttgatcgatcgatcggcgagagatccgagatttttgttttcatcttgggttgctggctgtgtaggtgggcagcgatagcgtcgtacttgccggagaggacggacaacgacatcaagaactactggaacacgcacctcaagaagaagctcaagaagatgcaggccgccggaggtggggaagacggcggcgccgcctcggagggtggcggcggccgcggcgacggcgacggcggcgggaaaagcgtgaaggccgccgcacctaaggggcagtgggagcggcggctgcagacggacatccacacggcgcggcaggcgctgcgcgacgcgctctcgctcgaccaccccgacccgtcgccggcgacggcggcggcggcggcgacgccagcggggtcgtcggcggcgtacgcgtcgagcgcggacaacatcgcgcggctgctgcagggctggatgcgcccgggcggcggcggcggcggcaacggcaagggccccgaggcgtcggggtcgacctccacgacggcgacgacgcagcagcagccgcagtgctccggcgagggcgcggcatccgcgtccgcgtcggcgagccagagcggcgccgccgccgcggcgactgcccagacgccggagtgctcgacggagacgagcaagatggccaccggcggcggcgccggcggccccgcgccggcgttctcgatgctggagagctggctgctcgacgacggcggcatggggctcatggacgtggtgccattgggggaccccagtgagttcttttaa
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| Protein seq | MGRPPCCDKVGVKKGPWTPEEDLMLVSYIQEHGAGNWRAVPTNTGACSCVLDRSIGERSEIFVFILGCWLCRWAAIASYLPERTDNDIKNYWNTHLKKKLKKMQAAGGGEDGGAASEGGGGRGDGDGGGKSVKAAAPKGQWERRLQTDIHTARQALRDALSLDHPDPSPATAAAAATPAGSSAAYASSADNIARLLQGWMRPGGGGGGNGKGPEASGSTSTTATTQQQPQCSGEGAASASASASQSGAAAAATAQTPECSTETSKMATGGGAGGPAPAFSMLESWLLDDGGMGLMDVVPLGDPSEFF |
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| Function | Myb-related protein 306 [UniProtKB/Swiss-Prot:P81392] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_09g0010230 | OsARC_09g0010230.01 | Chr09 | 16058156 | 16059714 | + | NAM | ||
| CDS seq | atggggaggccgccgtgctgcgacaaggtcggggtgaagaaggggccatggacgccggaggaggacctgatgctggtctcctacatccaggagcacggcgccggcaactggcgcgccgtgccgacgaacaccggtgcgtgttcttgcgttcttgatcgatcgatcggcgagagatccgagatttttgttttcatcttgggttgctggctgtgtaggtgggcagcgatagcgtcgtacttgccggagaggacggacaacgacatcaagaactactggaacacgcacctcaagaagaagctcaagaagatgcaggccgccggaggtggggaagacggcggcgccgcctcggagggtggcggcggccgcggcgacggcgacggcggcgggaaaagcgtgaaggccgccgcacctaaggggcagtgggagcggcggctgcagacggacatccacacggcgcggcaggcgctgcgcgacgcgctctcgctcgaccaccccgacccgtcgccggcgacggcggcggcggcggcgacgccagcggggtcgtcggcggcgtacgcgtcgagcgcggacaacatcgcgcggctgctgcagggctggatgcgcccgggcggcggcggcggcggcaacggcaagggccccgaggcgtcggggtcgacctccacgacggcgacgacgcagcagcagccgcagtgctccggcgagggcgcggcatccgcgtccgcgtcggcgagccagagcggcgccgccgccgcggcgactgcccagacgccggagtgctcgacggagacgagcaagatggccaccggcggcggcgccggcggccccgcgccggcgttctcgatgctggagagctggctgctcgacgacggcggcatggggctcatggacgtggtgccattgggggaccccagtgagttcttttaa
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| Protein seq | MGRPPCCDKVGVKKGPWTPEEDLMLVSYIQEHGAGNWRAVPTNTGACSCVLDRSIGERSEIFVFILGCWLCRWAAIASYLPERTDNDIKNYWNTHLKKKLKKMQAAGGGEDGGAASEGGGGRGDGDGGGKSVKAAAPKGQWERRLQTDIHTARQALRDALSLDHPDPSPATAAAAATPAGSSAAYASSADNIARLLQGWMRPGGGGGGNGKGPEASGSTSTTATTQQQPQCSGEGAASASASASQSGAAAAATAQTPECSTETSKMATGGGAGGPAPAFSMLESWLLDDGGMGLMDVVPLGDPSEFF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0538400 | SBH | 0.0 | 0.0 | 2.573155 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g24800 | RBH | 0.0 | 0.104911 | 0.006360 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0532900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0010220 | RBH | 0.141456 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0010170 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0010470 | RBH | 0.0 | 0.0 | 0.294820 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0017450 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0010340 | RBH | 2.354202 | 0.0 | 4.229799 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0249100 | RBH | 2.453075 | 0.1173925 | 4.080899 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0010320 | RBH | 0.0 | 0.0 | 0.322745 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0235200 | RBH | 4.523616 | 0 | 5.5390525 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0010300 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0010070 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0010230 | RBH | 0.0 | 4.733323 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0010030 | RBH | 0.000000 | 0.0 | 0.172571 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0010100 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G010570 | RBH | 0.0 | 0.0 | 1.883730 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0010360 | RBH | 0.294940 | 0.0 | 1.518586 |
