Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_02g0012500 | OGI:02029910 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr02:10706814-10710280 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ctattcgcgctcgtcatctgaaacttggccatctgaaatatcaattaattaacgtcagaataagaaagggcaaaagatcgacaagaatcaattaggagcaagcttagcaagcatcacatgtacctccgtcaatgctaatgcttggatgattcgggtggatcttggtggcacgcctcagcgcagccttcaattcgttcacctcctcctcgctggcgccttcacaatccaacgagacattgacctcctggagcgatggcaagctccccagtcccaagtcgagaccatcgtcgccggcaccggcgacggcgatcgcctcccgcacggagaaccgggagcgaagcgttctgagcctcggcattgctcctcgccggaacaccgccggcccaacgaatccccacaacccacagcacaccaggcacgcgaacgagccagctgatccaatcaccaacaccaccccgcggattccgagctcctcgtggtccacctgcagctgcagatcgcggagagcaggcagcctcccgagggtctcaacgtcggcctgccggatctccctcacggcgatggatagcgagcggaggtttgggacatgcgacggattcgtcatccacgccggcagcgacgagaaccagcagatcttctctgtatccagtgcgacgagatgccgaggggcgacccaggcgtccaaaccacccatgttctttcgaacattgttcatgcagacgtcgatggagagacgctggatcttctgcaacttgtgtaggagacccaccagtttgtcgttccatccgtcccagaagatgatgcacagcaccctcagctccgttaggttgcccagctcttctagaatgcccacagtagcacaatcgatcaacacatatgctagatgttcaagccttgttaggcttccaatcccatctggcaccctcgcaaacccgtcgaagcatagggacgtcaaatgtctgagcttcacaatattcagtggcaagtcacaaatagggtttgccctcaggtccaaagtttgtagaaactgtatgtttcctatttcttctggggcctcccgaatatctgtgtcacgtagtcctagatacctcaagtgaaataaattcccaacatacttaaggctgtaaccttgtgaaagatcacaaccttgtaaatccagtacacgtaaaactcagaagctcctaaggacaggtactagatcagtggcagatggaaagacaagagctgtccttgcttgctgcaagctccgagttgctgaagtcatagcatgatcttcattgccattttggagggacaacctccgaatcgtgtatgacagagatccttgatccctaccatttaatatagtaacaaagttttcctcacttgacaatgagcagataagatcgaggaccatatcgtgtacgcgacactcagataccatgtcagtatacatatcatatatgggttggatcatatttctatttacaaggtcattgaagtaactctctccgagttcaaataggctcctcccttgtttcccacactggataaagccttcagctacccacatccatatcaaacgatctttttcgattttgtaatcttccggaaacacacttaaATataataagtaagttctcaaatggggtggcagatcataatagctaaatgacaagatctttctcatattcttaacatccagactattctcgagaccagtaccaaccgagttgtacaccttgtaccactccatcttatttcttgctttacaagccagcagactagccattgtaatgatagctaatggaacacctgcacatttctttagtattctctcggatacttcagccaactcctcatcaggatatttttccgtgtcttcacagttaccaaatattcttccatatagtaatcgtcgagagttatttaaagaaagatgtttcaacttgtaaacaccaccagctttttcagcaacctcagaaatacgtgttgttgtaatgattttgtatccaacatcattatcaggcaaagcacatttaatcattttccatattgagatatcccatatgtcatccataacaatgaaatacctgcatatagattaagtccttaattaggAaaaaaactaatgaaattagaacgggaagttcaaatactggggccaggtagattagcaagttcgtaggcaaaactagtctagctattgtgaatctttgccaaaacagagataaattattcactcaagaaaagaagatttggacatagctatttaattccgactcaataacgatgtaaaaaggcttataagcagttgtagTttttttttatttaacccggacatgatgaacattctcaacaattaacagtatgtagactgctaattagtacttcctccgtttcacaatgtaagtcattctaacattttccacattcatattggtgttaatgaatctagataaaTatatatgtctagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattgtgaaacggaggaagtattacgaaatggatggcatactagcaaattattagttgctgagaaaaaacatcatatatatgtacagattggtggaaggaatgtgcttccatatataccttttctgttgaaggaattctctgagttcattgatgagctgcacctcatccaaatccaatggtttttcattgagatctttatatttctccttgtcaagttgataaatgatgtccatgaacaatttcttcaagtcaggagtttgagacactgatacgaaagcacaacaatcgaacagtgatctaatcttttcatatactacattagcgagagttgtttttcccaatccccccgaatccaacaatggaaaccaccttgcctgctcgctgcatggacactccattctcttccgtcagaatattgatcagctcatctctcgtctcaccgatgccaacaagctctttctcatccgtgtaccgcgtgaataaacgagggtcaattgtagcagtcttatcaccaccaccagcaccaatgttgatctcatacctgcggcgacgctcgtgaacctcgacgacgcggctcttgatgtccatgatctcagaggcgatcccatggcgagccttggccttcctgaataggccgacacttctatcgattagcttgctgatgccccgtggtttggcctcaccgtccccgttgtcgttgccgatgtcgcgcacgacgaacgcgtcgatggtgtcctcgatgtcgaaggagagctctctgagatccctggcccagatcttgtcctggggatcaagctggtcggccggcgtggcggagaccttggcgagggcgccctgcatgctctcgagctcggattggaggaacctgatctccccctttaccgccttctgcagattgtactcgccgacgagcagatcacctagcttggcgatgacgcttggcagtgcacccgtcgccaactccat
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| CDS seq | atggagttggcgacgggtgcactgccaagcgtcatcgccaagctaggtgatctgctcgtcggcgagtacaatctgcagaaggcggtaaagggggagatcaggttcctccaatccgagctcgagagcatgcagggcgccctcgccaaggtctccgccacgccggccgaccagcttgatccccaggacaagatctgggccagggatctcagagagctctccttcgacatcgaggacaccatcgacgcgttcgtcgtgcgcgacatcggcaacgacaacggggacggtgaggccaaaccacggggcatcagcaagctaatcgatagaagtgtcggcctattcaggaaggccaaggctcgccatgggatcgcctctgagatcatggacatcaagagccgcgtcgtcgaggttcacgagcgtcgccgcaggtatgagatcaacattggtgctggtggtggtgataagactgctacaattgaccctcgtttattcacgcggtacacggatgagaaagagcttgttggcatcgtgtctcaaactcctgacttgaagaaattgttcatggacatcatttatcaacttgacaaggagaaatataaagatctcaatgaaaaaccattggatttggatgaggtgcagctcatcaatgaactcagagaattccttcaacagaaaaggtatttcattgttatggatgacatatgggatatctcaatatggaaaatgattaaatgtgctttgcctgataatgatgttggatacaaaatcattacaacaacacgtatttctgaggttgctgaaaaagctggtggtgtttacaagttgaaacatctttctttaaataactctcgacgattactatatggaagaatatttggtaactgtgaagacacggaaaaatatcctgatgaggagttggctgaagtatccgagagaatactaaagaaatgtgcaggtgttccattagctatcattacaatggctagtctgctggcttgtaaagcaagaaataagatggagtggtacaaggtgtacaactcggttggtactggtctcgagaatagtctggatgttaagaatatgagaaagatcttgtcatttagctattatgatctgccaccccatttgagaacttacttattatATttaagtgtgtttccggaagattacaaaatcgaaaaagatcgtttgatatggatgtgggtagctgaaggctttatccagtgtgggaaacaagggaggagcctatttgaactcggagagagttacttcaatgaccttgtaaatagaaatatgatccaacccatatatgatatgtatactgacatggtatctgagtgtcgcgtacacgatatggtcctcgatcttatctgctcattgtcaagtgaggaaaactttgttactatattaaatggttgtgatctttcacaaggttacagccttaagtatgttgggaatttatttcacttgaggtatctaggactacgtgacacagatattcgggaggccccagaagaaataggaaacatacagtttctacaaactttggacctgagggcaaaccctatttgtgacttgccactgaatattgtgaagctcagacatttgacgtccctatgcttcgacgggtttgcgagggtgccagatgggattggaagcctaacaaggcttgaacatctagcatatgtgttgatcgattgtgctactgtgggcattctagaagagctgggcaacctaacggagctgagggtgctgtgcatcatcttctgggacggatggaacgacaaactggtgggtctcctacacaagttgcagaagatccagcgtctctccatcgacgtctgcatgaacaatgttcgaaagaacatgggtggtttggacgcctgggtcgcccctcggcatctcgtcgcactggatacagagaagatctgctggttctcgtcgctgccggcgtggatgacgaatccgtcgcatgtcccaaacctccgctcgctatccatcgccgtgagggagatccggcaggccgacgttgagaccctcgggaggctgcctgctctccgcgatctgcagctgcaggtggaccacgaggagctcggaatccgcggggtggtgttggtgattggatcagctggctcgttcgcgtgcctggtgtgctgtgggttgtggggattcgttgggccggcggtgttccggcgaggagcaatgccgaggctcagaacgcttcgctcccggttctccgtgcgggaggcgatcgccgtcgccggtgccggcgacgatggtctcgacttgggactggggagcttgccatcgctccaggaggtcaatgtctcgttggattgtgaaggcgccagcgaggaggaggtgaacgaattgaaggctgcgctgaggcgtgccaccaagatccacccgaatcatccaagcattagcattgacggagatggccaagtttcagatgacgagcgcgaatag
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| Protein seq | MELATGALPSVIAKLGDLLVGEYNLQKAVKGEIRFLQSELESMQGALAKVSATPADQLDPQDKIWARDLRELSFDIEDTIDAFVVRDIGNDNGDGEAKPRGISKLIDRSVGLFRKAKARHGIASEIMDIKSRVVEVHERRRRYEINIGAGGGDKTATIDPRLFTRYTDEKELVGIVSQTPDLKKLFMDIIYQLDKEKYKDLNEKPLDLDEVQLINELREFLQQKRYFIVMDDIWDISIWKMIKCALPDNDVGYKIITTTRISEVAEKAGGVYKLKHLSLNNSRRLLYGRIFGNCEDTEKYPDEELAEVSERILKKCAGVPLAIITMASLLACKARNKMEWYKVYNSVGTGLENSLDVKNMRKILSFSYYDLPPHLRTYLLYLSVFPEDYKIEKDRLIWMWVAEGFIQCGKQGRSLFELGESYFNDLVNRNMIQPIYDMYTDMVSECRVHDMVLDLICSLSSEENFVTILNGCDLSQGYSLKYVGNLFHLRYLGLRDTDIREAPEEIGNIQFLQTLDLRANPICDLPLNIVKLRHLTSLCFDGFARVPDGIGSLTRLEHLAYVLIDCATVGILEELGNLTELRVLCIIFWDGWNDKLVGLLHKLQKIQRLSIDVCMNNVRKNMGGLDAWVAPRHLVALDTEKICWFSSLPAWMTNPSHVPNLRSLSIAVREIRQADVETLGRLPALRDLQLQVDHEELGIRGVVLVIGSAGSFACLVCCGLWGFVGPAVFRRGAMPRLRTLRSRFSVREAIAVAGAGDDGLDLGLGSLPSLQEVNVSLDCEGASEEEVNELKAALRRATKIHPNHPSISIDGDGQVSDDERE |
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| Function | Disease resistance protein RGA5 [UniProtKB/Swiss-Prot:Q2R8L1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_02g0012500 | OsARC_02g0012500.01 | Chr02 | 10706814 | 10710280 | - | NAM | ||
| CDS seq | atggagttggcgacgggtgcactgccaagcgtcatcgccaagctaggtgatctgctcgtcggcgagtacaatctgcagaaggcggtaaagggggagatcaggttcctccaatccgagctcgagagcatgcagggcgccctcgccaaggtctccgccacgccggccgaccagcttgatccccaggacaagatctgggccagggatctcagagagctctccttcgacatcgaggacaccatcgacgcgttcgtcgtgcgcgacatcggcaacgacaacggggacggtgaggccaaaccacggggcatcagcaagctaatcgatagaagtgtcggcctattcaggaaggccaaggctcgccatgggatcgcctctgagatcatggacatcaagagccgcgtcgtcgaggttcacgagcgtcgccgcaggtatgagatcaacattggtgctggtggtggtgataagactgctacaattgaccctcgtttattcacgcggtacacggatgagaaagagcttgttggcatcgtgtctcaaactcctgacttgaagaaattgttcatggacatcatttatcaacttgacaaggagaaatataaagatctcaatgaaaaaccattggatttggatgaggtgcagctcatcaatgaactcagagaattccttcaacagaaaaggtatttcattgttatggatgacatatgggatatctcaatatggaaaatgattaaatgtgctttgcctgataatgatgttggatacaaaatcattacaacaacacgtatttctgaggttgctgaaaaagctggtggtgtttacaagttgaaacatctttctttaaataactctcgacgattactatatggaagaatatttggtaactgtgaagacacggaaaaatatcctgatgaggagttggctgaagtatccgagagaatactaaagaaatgtgcaggtgttccattagctatcattacaatggctagtctgctggcttgtaaagcaagaaataagatggagtggtacaaggtgtacaactcggttggtactggtctcgagaatagtctggatgttaagaatatgagaaagatcttgtcatttagctattatgatctgccaccccatttgagaacttacttattatATttaagtgtgtttccggaagattacaaaatcgaaaaagatcgtttgatatggatgtgggtagctgaaggctttatccagtgtgggaaacaagggaggagcctatttgaactcggagagagttacttcaatgaccttgtaaatagaaatatgatccaacccatatatgatatgtatactgacatggtatctgagtgtcgcgtacacgatatggtcctcgatcttatctgctcattgtcaagtgaggaaaactttgttactatattaaatggttgtgatctttcacaaggttacagccttaagtatgttgggaatttatttcacttgaggtatctaggactacgtgacacagatattcgggaggccccagaagaaataggaaacatacagtttctacaaactttggacctgagggcaaaccctatttgtgacttgccactgaatattgtgaagctcagacatttgacgtccctatgcttcgacgggtttgcgagggtgccagatgggattggaagcctaacaaggcttgaacatctagcatatgtgttgatcgattgtgctactgtgggcattctagaagagctgggcaacctaacggagctgagggtgctgtgcatcatcttctgggacggatggaacgacaaactggtgggtctcctacacaagttgcagaagatccagcgtctctccatcgacgtctgcatgaacaatgttcgaaagaacatgggtggtttggacgcctgggtcgcccctcggcatctcgtcgcactggatacagagaagatctgctggttctcgtcgctgccggcgtggatgacgaatccgtcgcatgtcccaaacctccgctcgctatccatcgccgtgagggagatccggcaggccgacgttgagaccctcgggaggctgcctgctctccgcgatctgcagctgcaggtggaccacgaggagctcggaatccgcggggtggtgttggtgattggatcagctggctcgttcgcgtgcctggtgtgctgtgggttgtggggattcgttgggccggcggtgttccggcgaggagcaatgccgaggctcagaacgcttcgctcccggttctccgtgcgggaggcgatcgccgtcgccggtgccggcgacgatggtctcgacttgggactggggagcttgccatcgctccaggaggtcaatgtctcgttggattgtgaaggcgccagcgaggaggaggtgaacgaattgaaggctgcgctgaggcgtgccaccaagatccacccgaatcatccaagcattagcattgacggagatggccaagtttcagatgacgagcgcgaatag
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| Protein seq | MELATGALPSVIAKLGDLLVGEYNLQKAVKGEIRFLQSELESMQGALAKVSATPADQLDPQDKIWARDLRELSFDIEDTIDAFVVRDIGNDNGDGEAKPRGISKLIDRSVGLFRKAKARHGIASEIMDIKSRVVEVHERRRRYEINIGAGGGDKTATIDPRLFTRYTDEKELVGIVSQTPDLKKLFMDIIYQLDKEKYKDLNEKPLDLDEVQLINELREFLQQKRYFIVMDDIWDISIWKMIKCALPDNDVGYKIITTTRISEVAEKAGGVYKLKHLSLNNSRRLLYGRIFGNCEDTEKYPDEELAEVSERILKKCAGVPLAIITMASLLACKARNKMEWYKVYNSVGTGLENSLDVKNMRKILSFSYYDLPPHLRTYLLYLSVFPEDYKIEKDRLIWMWVAEGFIQCGKQGRSLFELGESYFNDLVNRNMIQPIYDMYTDMVSECRVHDMVLDLICSLSSEENFVTILNGCDLSQGYSLKYVGNLFHLRYLGLRDTDIREAPEEIGNIQFLQTLDLRANPICDLPLNIVKLRHLTSLCFDGFARVPDGIGSLTRLEHLAYVLIDCATVGILEELGNLTELRVLCIIFWDGWNDKLVGLLHKLQKIQRLSIDVCMNNVRKNMGGLDAWVAPRHLVALDTEKICWFSSLPAWMTNPSHVPNLRSLSIAVREIRQADVETLGRLPALRDLQLQVDHEELGIRGVVLVIGSAGSFACLVCCGLWGFVGPAVFRRGAMPRLRTLRSRFSVREAIAVAGAGDDGLDLGLGSLPSLQEVNVSLDCEGASEEEVNELKAALRRATKIHPNHPSISIDGDGQVSDDERE
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0286850 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g18510 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0286850 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0012630 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0012830 | RBH | 0.0 | 1.507085 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0012670 | RBH | 0.0 | 0.904084 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0012400 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0167400 | RBH | 0.0851135 | 3.352567 | 0.003219 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0012220 | RBH | 0.0 | 0.200903 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0180500 | RBH | 0.094544 | 3.8774995 | 0.0169185 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0012770 | RBH | 0.033595 | 0.020549 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0012370 | RBH | 0.066740 | 1.105390 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0012800 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0012650 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0012440 | RBH | 0.000000 | 0.554768 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G012800 | RBH | 0.0 | 0.000000 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0012510 | RBH | 0.196383 | 2.925074 | 0.0 |
