Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os10g0531400 | OGI:10063250 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr10:20645931-20646880 | ||||||||
| Gene Symbol | GSTU10, OsGSTU10 | ||||||||||
| DNA seq | GAGCCAACGACTACACCTCGGGAGGGTACACGGCGATCGAGTAGCTCGAGAACGAGACGTGGCAATGGCGGGAGACGGCGAGCTGAAGCTACTGGGGATGTGGACCAGCGCGTTCGTGCTCAGGGTGCGCTTCGTCCTCAACCTCAAGTCACTGCCGTACGAGTTCGTGGAGGAGAACCTGGGCGACAAGAGCGACCTCCTCCTCGCCTCCAACCCGGTCAACAAGACCGTCCCCGTCCTCCTCCACGCCGGCCGCCCCGTCAACGAGTCGCAGGTCATCCTGCAGTACATCGACGAGGCCTGGCCCGACCGCCCCCCCGCCGTGCTGCCCTCCGACCCCTACGAGCGCGCCGTGGCGCGGTTCTGGGCGGCATACGTCGACGACAAGGTGCGGCTGGCGTGGCTGGGGATCCTGTTCCGGAGCGAGACGGAGGAGGAGAGGGCGGCGGCGGTGGCGCAGGCCGACGCGGCGCTGGAGACGCTGGAGGGCGCGCTCCGGGAGTGCTCCGGGGGGAAGCCCTTCTTCGGCGGCGACGGCGTCGGGCTCGTCGACGTCGTGCTCGGCGGCTACCTCGGGTGGTTCACGGCGATCAAGAAGCTGATCGGGCGCAGGATGATCGACCCGGCGAGGACGCCGGCGCTGGCCGCGTGGGAGGATCTCTTCCGCGCCACCGATGCGGCCAGGGGCGTCTTGCCGGATGACGCCGACAAGATGCTCGAGTTCAGGCAGACGGCACTCGCCTTGGGCGCCTCCAAAAAAATCACTCTGTGACACTAAAGACATGTATGTGGCACGCCATGCGTATCCAAGCTAAGTTTGTGAGGCTGCGACAGGCAGCCATATACATCTAGTTTTGTTTCTTCCATGGCCCATGGCGTGCTTAATTAAATTGTTTTCTTCTCGATGCTACTTTTGACTTTGTATCAAAGACAATGTAATAAGTGGTTGT
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| CDS seq | ATGGCGGGAGACGGCGAGCTGAAGCTACTGGGGATGTGGACCAGCGCGTTCGTGCTCAGGGTGCGCTTCGTCCTCAACCTCAAGTCACTGCCGTACGAGTTCGTGGAGGAGAACCTGGGCGACAAGAGCGACCTCCTCCTCGCCTCCAACCCGGTCAACAAGACCGTCCCCGTCCTCCTCCACGCCGGCCGCCCCGTCAACGAGTCGCAGGTCATCCTGCAGTACATCGACGAGGCCTGGCCCGACCGCCCCCCCGCCGTGCTGCCCTCCGACCCCTACGAGCGCGCCGTGGCGCGGTTCTGGGCGGCATACGTCGACGACAAGGTGCGGCTGGCGTGGCTGGGGATCCTGTTCCGGAGCGAGACGGAGGAGGAGAGGGCGGCGGCGGTGGCGCAGGCCGACGCGGCGCTGGAGACGCTGGAGGGCGCGCTCCGGGAGTGCTCCGGGGGGAAGCCCTTCTTCGGCGGCGACGGCGTCGGGCTCGTCGACGTCGTGCTCGGCGGCTACCTCGGGTGGTTCACGGCGATCAAGAAGCTGATCGGGCGCAGGATGATCGACCCGGCGAGGACGCCGGCGCTGGCCGCGTGGGAGGATCTCTTCCGCGCCACCGATGCGGCCAGGGGCGTCTTGCCGGATGACGCCGACAAGATGCTCGAGTTCAGGCAGACGGCACTCGCCTTGGGCGCCTCCAAAAAAATCACTCTGTGA
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| Protein seq | MAGDGELKLLGMWTSAFVLRVRFVLNLKSLPYEFVEENLGDKSDLLLASNPVNKTVPVLLHAGRPVNESQVILQYIDEAWPDRPPAVLPSDPYERAVARFWAAYVDDKVRLAWLGILFRSETEEERAAAVAQADAALETLEGALRECSGGKPFFGGDGVGLVDVVLGGYLGWFTAIKKLIGRRMIDPARTPALAAWEDLFRATDAARGVLPDDADKMLEFRQTALALGASKKITL |
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| Function | Probable glutathione S-transferase GSTU6 [UniProtKB/Swiss-Prot:Q06398] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os10g0531400 | Os10t0531400-01 | Chr10 | 20645931 | 20646880 | + | irgsp1_rep | ||
| CDS seq | ATGGCGGGAGACGGCGAGCTGAAGCTACTGGGGATGTGGACCAGCGCGTTCGTGCTCAGGGTGCGCTTCGTCCTCAACCTCAAGTCACTGCCGTACGAGTTCGTGGAGGAGAACCTGGGCGACAAGAGCGACCTCCTCCTCGCCTCCAACCCGGTCAACAAGACCGTCCCCGTCCTCCTCCACGCCGGCCGCCCCGTCAACGAGTCGCAGGTCATCCTGCAGTACATCGACGAGGCCTGGCCCGACCGCCCCCCCGCCGTGCTGCCCTCCGACCCCTACGAGCGCGCCGTGGCGCGGTTCTGGGCGGCATACGTCGACGACAAGGTGCGGCTGGCGTGGCTGGGGATCCTGTTCCGGAGCGAGACGGAGGAGGAGAGGGCGGCGGCGGTGGCGCAGGCCGACGCGGCGCTGGAGACGCTGGAGGGCGCGCTCCGGGAGTGCTCCGGGGGGAAGCCCTTCTTCGGCGGCGACGGCGTCGGGCTCGTCGACGTCGTGCTCGGCGGCTACCTCGGGTGGTTCACGGCGATCAAGAAGCTGATCGGGCGCAGGATGATCGACCCGGCGAGGACGCCGGCGCTGGCCGCGTGGGAGGATCTCTTCCGCGCCACCGATGCGGCCAGGGGCGTCTTGCCGGATGACGCCGACAAGATGCTCGAGTTCAGGCAGACGGCACTCGCCTTGGGCGCCTCCAAAAAAATCACTCTGTGA
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| Protein seq | MAGDGELKLLGMWTSAFVLRVRFVLNLKSLPYEFVEENLGDKSDLLLASNPVNKTVPVLLHAGRPVNESQVILQYIDEAWPDRPPAVLPSDPYERAVARFWAAYVDDKVRLAWLGILFRSETEEERAAAVAQADAALETLEGALRECSGGKPFFGGDGVGLVDVVLGGYLGWFTAIKKLIGRRMIDPARTPALAAWEDLFRATDAARGVLPDDADKMLEFRQTALALGASKKITL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0531400 | RBH | 5.571281 | 8.113422 | 5.280809 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g38780 | RBH | 3.267212 | 4.270603 | 1.121319 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0530900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0018010 | RBH | 0.577433 | 19.367992 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0018390 | RBH | 0.129632 | 2.709340 | 0.962618 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0017780 | RBH | 3.530253 | 10.468629 | 1.367933 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0018330 | RBH | 0.143922 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0018080 | RBH | 1.056344 | 3.484460 | 4.564107 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0340600 | RBH | 0.6909775 | 3.4901365 | 0.1041325 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0017980 | RBH | 0.0 | 0.0 | 0.389651 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0365100 | RBH | 1.1414385 | 2.675181 | 0.083823 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0017730 | RBH | 0.085938 | 0.126047 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0017570 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0018210 | RBH | 0.0 | 8.918435 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0017770 | RBH | 0.0 | 0.0 | 0.060294 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0018300 | RBH | 0.0 | 1.005229 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G017950 | RBH | 0.649484 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0018090 | RBH | 0.0 | 0.0 | 4.026898 |
