Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os10g0525500 | OGI:10056790 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr10:20434654-20435650 | ||||||||
| Gene Symbol | GSTU21, OsGSTU21 | ||||||||||
| DNA seq | CCTACTTAAGCACTAAAAATTATGGAACCAGATCCGATGATGTAATGCAGTACATGCAACACAAAGGAGAATGCTTAATTCGCTGATCACTTGGGAGCATCCAAAGCCTTCATCGAAGCGGCATGCTTAACGGCGAACTCGACCAATTTATCGGCGTCAGGCATGGCGTCCACCACGGCCGGATGCGCGCAGAAGCGATCCGCCCAAGCAGCCAGGTTTGGAACCTTCGCCTCGTCAAGGAGCTCGACGCCGGCGAACTTCTCCACCGCCTTAATCCATCCGAGGAACGACCCAAGAGCGATGTCCAGGTAGCCGATTTTGTCGCCGCCGAAGTATTTCTTCCCTTGGCTGCACTTGACAAATGCCTCCTCCAGATGCTTCAGAGCGGTGGACATTTCAACCACGGTTCCTCTCCGGCCACGGTTCCTCTCAACACGCGAGTCCCCCGAGGAAACTGCACACAAATTATCCAAGATGAGAGCAAAATCATCCGGCTAAAAAGGATTAAAAAGAAGAAAAATTCAGATGAATTTGCAGTTTGAGGACGCGCGAGACTGTGTCTGTACTTACCTTGTCGTCGATGTACTGTGCCCAGAACCGCTCGACGGCGCGGCAGTATGGGTCACGGGGCAGTATGGCCGGGGCGCCATCGGAGGCCGGCCAGACCTCGTCGATGTACTCGACGATGATGAGAGACTCGGCGAGGGGCTTGCCGTGGTGGAGCAGCACGGGGATCTTCTTGTGGACCGGGTTGGACCGGAGCAGCAGCTCGCTCTTCTTCCCCCTCGTCTCCTGCAACAGCTCGTACTCCTCCACGCCCTTCAGCTTCAGCGCTACCACGACGCGCATCACGAACGGGCTCGTCCAACTGCCGAGCACGCGCACCGCCGCCGCGGGCTCGGCTGAACCGCTCGTCGACGACGAGGACATTTTTACTCGATGTGGCCAAGAAACAGAAGCTGCTGGTTTACTCGAGTTCAGTGAGCAGACTGAAGCT
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| CDS seq | ATGTCCTCGTCGTCGACGAGCGGTTCAGCCGAGCCCGCGGCGGCGGTGCGCGTGCTCGGCAGTTGGACGAGCCCGTTCGTGATGCGCGTCGTGGTAGCGCTGAAGCTGAAGGGCGTGGAGGAGTACGAGCTGTTGCAGGAGACGAGGGGGAAGAAGAGCGAGCTGCTGCTCCGGTCCAACCCGGTCCACAAGAAGATCCCCGTGCTGCTCCACCACGGCAAGCCCCTCGCCGAGTCTCTCATCATCGTCGAGTACATCGACGAGGTCTGGCCGGCCTCCGATGGCGCCCCGGCCATACTGCCCCGTGACCCATACTGCCGCGCCGTCGAGCGGTTCTGGGCACAGTACATCGACGACAAGTTTCCTCGGGGGACTCGCGTGTTGAGAGGAACCGTGGCCGGAGAGGAACCGTGGTTGAAATGTCCACCGCTCTGA
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| Protein seq | MSSSSTSGSAEPAAAVRVLGSWTSPFVMRVVVALKLKGVEEYELLQETRGKKSELLLRSNPVHKKIPVLLHHGKPLAESLIIVEYIDEVWPASDGAPAILPRDPYCRAVERFWAQYIDDKFPRGTRVLRGTVAGEEPWLKCPPL |
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| Function | Glutathione S-transferase U17 [UniProtKB/Swiss-Prot:Q9FUS8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os10g0525500 | Os10t0525500-01 | Chr10 | 20434654 | 20435650 | - | irgsp1_rep | ||
| CDS seq | ATGTCCTCGTCGTCGACGAGCGGTTCAGCCGAGCCCGCGGCGGCGGTGCGCGTGCTCGGCAGTTGGACGAGCCCGTTCGTGATGCGCGTCGTGGTAGCGCTGAAGCTGAAGGGCGTGGAGGAGTACGAGCTGTTGCAGGAGACGAGGGGGAAGAAGAGCGAGCTGCTGCTCCGGTCCAACCCGGTCCACAAGAAGATCCCCGTGCTGCTCCACCACGGCAAGCCCCTCGCCGAGTCTCTCATCATCGTCGAGTACATCGACGAGGTCTGGCCGGCCTCCGATGGCGCCCCGGCCATACTGCCCCGTGACCCATACTGCCGCGCCGTCGAGCGGTTCTGGGCACAGTACATCGACGACAAGTTTCCTCGGGGGACTCGCGTGTTGAGAGGAACCGTGGCCGGAGAGGAACCGTGGTTGAAATGTCCACCGCTCTGA
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| Protein seq | MSSSSTSGSAEPAAAVRVLGSWTSPFVMRVVVALKLKGVEEYELLQETRGKKSELLLRSNPVHKKIPVLLHHGKPLAESLIIVEYIDEVWPASDGAPAILPRDPYCRAVERFWAQYIDDKFPRGTRVLRGTVAGEEPWLKCPPL |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0525500 | RBH | 1.622879 | 0.284194 | 3.444963 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g38150 | RBH | 1.035127 | 0.184122 | 0.879540 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0017850 | SBH | 0.0 | 5.480729 | 2.745847 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0018150 | RBH | 0.000000 | 0.000000 | 0.669551 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0017630 | SBH | 1.351896 | 2.332076 | 14.057199 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0018110 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0017840 | RBH | 0.0 | 3.477302 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0336800 | RBH | 1.236703 | 5.0144555 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0017740 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0361200 | RBH | 1.2666335 | 3.027202 | 0.0163205 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0017530 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0017360 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0018010 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0017580 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0018040 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G017890 | SBH | 1.660139 | 16.673845 | 4.585860 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0017860 | SBH | 1.246565 | 0.000000 | 3.377607 |
