Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os10g38140 | OGI:10056790 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr10:20431775-20433265 | ||||||||
| Gene Symbol | GSTU15, OsGSTU15 | ||||||||||
| DNA seq | TTGTTTTCGGCTGGTTAACATCTTAGTTAACGTGAAAAACAATCCCGCAAGTCTCAGATTATATACTGCATCTAGCTAGTAACAAACTTTAATAAATCTCTAATTTGATCTCTTTATCTTATCTAAACTTCAAACCAACTCTGACGATGACCCCGTTCTCCCGTGCAACCTTCATCTTTACGCGTCGCTAGCTGGTAGCTAGCCTATCCCCATCTGACACTAAATACGGTAGCGAATGGCTGATGGTCATTAGAATATCATCATCATCATCAGTAGTAGTAGTAGTAATAAAAGACTGAGAGAAGTAGTAATAAAAGACTCAGAGAGAAGTCTTACAAGCAAAATTACAGACTCAGACGGAAAGGGAAACTACAGTTCCGAAGAAACGAAACAAAACAACGTAAATGACCATCATCTTTCACTAGTGACCATACTAAATGGCAACACGAAGCACGTTGCACGGTGAACTCAAACCAATTTATCGTCAGGCACAAAGCAGCATACCATCCATCACTTGGGAAGAACATTCACAGTATTCAGCACAGAACCATATTGAACGGTGAACTCAACCAATTTATCAGCGTCAGGCACGACGTCCACCACGGCTGGGTGCGCGCAGAAGCGATCCGCCCAAACAGCCAGGATCGGAAGCTTGGTTTCGTTGAGGAGCTCGACGCCGGCGATCTTCTCCACCGCCTTGATCCATCCGAGGAACGAACCCAGAGCGATATCCAGGTAGCCGATGCTGTCGCCGCCGAAGTATTCCTTCCCTTGGCTGCACTTGACAAATGCTTCCTCCAGACGCTGTAGAGTCGTGGACATTTCACCTGCGGTTTGGTCCTTGTCTCCGGCCACCGATCCTCTCAAAACCCGAAGCCCTGGTAGAATCTGCAAAAATATCATCAAAGCAAGAGCAAAAATTCTCCAAGAAACAAGAAGAAAATGTTCAGAGACAAAAAAAAATTACGCAAGACATGCCCTTACCTTGTCATCGACGTACCGTGCCCAGAACCGCTCGACGGCGCGGCCGTGGGGGTCGCGAGGGAGAATGGCCGGGGCGCCGCCATTGGAGGCCGGCCAGACCTCGTCGATGTACTCGACGATGACGAGAGACTCGGGGAGGGGCTTGCTGTGGTGGAGCAGCACGGGGAACTTCTTGTGCACCGGGTTGGACCGGAGCAGCAGCTCGCTCTTCTTCCCCACCGTCTCCTGCAACATCTCGTGCTCCACGCCCTTCAGCTTCAGCGCCACCACCACGCGGTTCGTGAAGGGGCTCGCCCAACCGCCCAGCACGCGCACCGCCGGCGGCGGCTCGCCTGAACTGTTGTTAGTCGACGACATGTTTGCTCGAGTTCGATCTTAATTGCTTTTTGGTTCTTGCTTGGCCGGGAGACTAGACTACTGCTTTAGTGTCCTTCTTGGTTCAGTGAGGAGACTGCTGCTGATATGCATGTGTTTATATGGAATTATGAAGCTCATTTTGCTTACTAT
More
|
||||||||||
| CDS seq | ATGTCGTCGACTAACAACAGTTCAGGCGAGCCGCCGCCGGCGGTGCGCGTGCTGGGCGGTTGGGCGAGCCCCTTCACGAACCGCGTGGTGGTGGCGCTGAAGCTGAAGGGCGTGGAGCACGAGATGTTGCAGGAGACGGTGGGGAAGAAGAGCGAGCTGCTGCTCCGGTCCAACCCGGTGCACAAGAAGTTCCCCGTGCTGCTCCACCACAGCAAGCCCCTCCCCGAGTCTCTCGTCATCGTCGAGTACATCGACGAGGTCTGGCCGGCCTCCAATGGCGGCGCCCCGGCCATTCTCCCTCGCGACCCCCACGGCCGCGCCGTCGAGCGGTTCTGGGCACGGTACGTCGATGACAAGATTCTACCAGGGCTTCGGGTTTTGAGAGGATCGGTGGCCGGAGACAAGGACCAAACCGCAGGTGAAATGTCCACGACTCTACAGCGTCTGGAGGAAGCATTTGTCAAGTGCAGCCAAGGGAAGGAATACTTCGGCGGCGACAGCATCGGCTACCTGGATATCGCTCTGGGTTCGTTCCTCGGATGGATCAAGGCGGTGGAGAAGATCGCCGGCGTCGAGCTCCTCAACGAAACCAAGCTTCCGATCCTGGCTGTTTGGGCGGATCGCTTCTGCGCGCACCCAGCCGTGGTGGACGTCGTGCCTGACGCTGATAAATTGGTTGAGTTCACCGTTCAATATGGTTCTGTGCTGAATACTGTGAATGTTCTTCCCAAGTGA
More
|
||||||||||
| Protein seq | MSSTNNSSGEPPPAVRVLGGWASPFTNRVVVALKLKGVEHEMLQETVGKKSELLLRSNPVHKKFPVLLHHSKPLPESLVIVEYIDEVWPASNGGAPAILPRDPHGRAVERFWARYVDDKILPGLRVLRGSVAGDKDQTAGEMSTTLQRLEEAFVKCSQGKEYFGGDSIGYLDIALGSFLGWIKAVEKIAGVELLNETKLPILAVWADRFCAHPAVVDVVPDADKLVEFTVQYGSVLNTVNVLPK |
||||||||||
| Function | Glutathione S-transferase U17 [UniProtKB/Swiss-Prot:Q9FUS8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os10g38140 | LOC_Os10g38140.1 | Chr10 | 20431775 | 20433265 | - | MSU_osa1r7 | ||
| CDS seq | ATGTCGTCGACTAACAACAGTTCAGGCGAGCCGCCGCCGGCGGTGCGCGTGCTGGGCGGTTGGGCGAGCCCCTTCACGAACCGCGTGGTGGTGGCGCTGAAGCTGAAGGGCGTGGAGCACGAGATGTTGCAGGAGACGGTGGGGAAGAAGAGCGAGCTGCTGCTCCGGTCCAACCCGGTGCACAAGAAGTTCCCCGTGCTGCTCCACCACAGCAAGCCCCTCCCCGAGTCTCTCGTCATCGTCGAGTACATCGACGAGGTCTGGCCGGCCTCCAATGGCGGCGCCCCGGCCATTCTCCCTCGCGACCCCCACGGCCGCGCCGTCGAGCGGTTCTGGGCACGGTACGTCGATGACAAGATTCTACCAGGGCTTCGGGTTTTGAGAGGATCGGTGGCCGGAGACAAGGACCAAACCGCAGGTGAAATGTCCACGACTCTACAGCGTCTGGAGGAAGCATTTGTCAAGTGCAGCCAAGGGAAGGAATACTTCGGCGGCGACAGCATCGGCTACCTGGATATCGCTCTGGGTTCGTTCCTCGGATGGATCAAGGCGGTGGAGAAGATCGCCGGCGTCGAGCTCCTCAACGAAACCAAGCTTCCGATCCTGGCTGTTTGGGCGGATCGCTTCTGCGCGCACCCAGCCGTGGTGGACGTCGTGCCTGACGCTGATAAATTGGTTGAGTTCACCGTTCAATATGGTTCTGTGCTGAATACTGTGAATGTTCTTCCCAAGTGA
More
|
|||||||
| Protein seq | MSSTNNSSGEPPPAVRVLGGWASPFTNRVVVALKLKGVEHEMLQETVGKKSELLLRSNPVHKKFPVLLHHSKPLPESLVIVEYIDEVWPASNGGAPAILPRDPHGRAVERFWARYVDDKILPGLRVLRGSVAGDKDQTAGEMSTTLQRLEEAFVKCSQGKEYFGGDSIGYLDIALGSFLGWIKAVEKIAGVELLNETKLPILAVWADRFCAHPAVVDVVPDADKLVEFTVQYGSVLNTVNVLPK
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.393197 | 1.313083 | 0.516288 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0525400 | RBH | 3.015300 | 3.225913 | 2.772895 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g38189 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0525400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0017850 | RBH | 0.0 | 5.480729 | 2.745847 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0018140 | RBH | 0.446948 | 0.000000 | 3.821584 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0017630 | RBH | 1.351896 | 2.332076 | 14.057199 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0018100 | RBH | 0.062887 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0017830 | RBH | 0.920699 | 0.0 | 4.962668 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0336600 | RBH | 23.118843 | 0.397267 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0017730 | RBH | 0.084725 | 0.0 | 0.403919 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0361000 | RBH | 19.8642305 | 0.345337 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0017520 | RBH | 0.629457 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0017350 | RBH | 0.427581 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0017990 | RBH | 5.051381 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0017570 | RBH | 0.559978 | 0.0 | 0.404231 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0018030 | RBH | 0.508885 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G017670 | RBH | 0.483893 | 0.000000 | 1.854035 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0017860 | RBH | 1.246565 | 0.000000 | 3.377607 |
