Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os10g22070 | OGI:10038500 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr10:11398327-11399073 | ||||||||
| Gene Symbol | GSTU33, OsGSTU33 | ||||||||||
| DNA seq | ATGGCCGCCGCCGCCGCCGGAGGAGGAGGATCACCGGATCACGAGCTGAAGCTGCTCGGCAGCACGAACCCTAGCCCGTTCGTCACCAGGGTGGAGCTCGCCCTCGCCCTGCGAGGCCTCACCTACGACCTCGTCGCCGTCGACCTCGACCGCAAGACCGACCTCCTCCTCGCCGCCAACCCCGTCCACGCCAAGGTCCCCGTCCTCATCCACCGCGGCCGCCCCGTCTGCGAGTCCCGGGTCATCCTCGAGTACATCGACGACGCCTTCCCCTTCCCCGGCGGCGGCGGCGCCCCGCTCCTCCCCCCCGCCGACGACCCCCTCGCCCGCGCCGCCGCCCGCTTCTGGGCCGCCCACGTCGACGACGAGTTCGTGGCGTCGTGGAGGCCGGCGTACCTGGGGAGCACGGAGGGGGAGAGGGCGGAGGGGATGGCGCGGATGGCCGCCGCGGTGGGGGCGCTGGAGGGGGCCCTCGCCGCCGCGGAGGGGAAGCCCTTCTTCGGCGGCGACGCCCCGGGGCTCGTCGACGTCACGCTGGGGTCGGTGATCCCGCGGACGAGGGCGAACGAGGCGCTCACGGGGACCAGGGTGCTCGACGCCGCCAGGACGCCGCTGCTGGCGGCGTGGGCGGAGCGGTTCGGCGAGCTCGACGCCGCCAGGAAGGTGCTCCCGGCCGTCGGCGACGTGGTCGAGTACCTGGAGACGAGGCTCCGGAGGAGTAATGTGGTTATCGCTAGGAAACAGTAG
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| CDS seq | ATGGCCGCCGCCGCCGCCGGAGGAGGAGGATCACCGGATCACGAGCTGAAGCTGCTCGGCAGCACGAACCCTAGCCCGTTCGTCACCAGGGTGGAGCTCGCCCTCGCCCTGCGAGGCCTCACCTACGACCTCGTCGCCGTCGACCTCGACCGCAAGACCGACCTCCTCCTCGCCGCCAACCCCGTCCACGCCAAGGTCCCCGTCCTCATCCACCGCGGCCGCCCCGTCTGCGAGTCCCGGGTCATCCTCGAGTACATCGACGACGCCTTCCCCTTCCCCGGCGGCGGCGGCGCCCCGCTCCTCCCCCCCGCCGACGACCCCCTCGCCCGCGCCGCCGCCCGCTTCTGGGCCGCCCACGTCGACGACGAGTTCGTGGCGTCGTGGAGGCCGGCGTACCTGGGGAGCACGGAGGGGGAGAGGGCGGAGGGGATGGCGCGGATGGCCGCCGCGGTGGGGGCGCTGGAGGGGGCCCTCGCCGCCGCGGAGGGGAAGCCCTTCTTCGGCGGCGACGCCCCGGGGCTCGTCGACGTCACGCTGGGGTCGGTGATCCCGCGGACGAGGGCGAACGAGGCGCTCACGGGGACCAGGGTGCTCGACGCCGCCAGGACGCCGCTGCTGGCGGCGTGGGCGGAGCGGTTCGGCGAGCTCGACGCCGCCAGGAAGGTGCTCCCGGCCGTCGGCGACGTGGTCGAGTACCTGGAGACGAGGCTCCGGAGGAGTAATGTGGTTATCGCTAGGAAACAGTAG
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| Protein seq | MAAAAAGGGGSPDHELKLLGSTNPSPFVTRVELALALRGLTYDLVAVDLDRKTDLLLAANPVHAKVPVLIHRGRPVCESRVILEYIDDAFPFPGGGGAPLLPPADDPLARAAARFWAAHVDDEFVASWRPAYLGSTEGERAEGMARMAAAVGALEGALAAAEGKPFFGGDAPGLVDVTLGSVIPRTRANEALTGTRVLDAARTPLLAAWAERFGELDAARKVLPAVGDVVEYLETRLRRSNVVIARKQ |
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| Function | Probable glutathione S-transferase GSTU6 [UniProtKB/Swiss-Prot:Q06398] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os10g22070 | LOC_Os10g22070.1 | Chr10 | 11398327 | 11399073 | + | MSU_osa1r7 | ||
| CDS seq | ATGGCCGCCGCCGCCGCCGGAGGAGGAGGATCACCGGATCACGAGCTGAAGCTGCTCGGCAGCACGAACCCTAGCCCGTTCGTCACCAGGGTGGAGCTCGCCCTCGCCCTGCGAGGCCTCACCTACGACCTCGTCGCCGTCGACCTCGACCGCAAGACCGACCTCCTCCTCGCCGCCAACCCCGTCCACGCCAAGGTCCCCGTCCTCATCCACCGCGGCCGCCCCGTCTGCGAGTCCCGGGTCATCCTCGAGTACATCGACGACGCCTTCCCCTTCCCCGGCGGCGGCGGCGCCCCGCTCCTCCCCCCCGCCGACGACCCCCTCGCCCGCGCCGCCGCCCGCTTCTGGGCCGCCCACGTCGACGACGAGTTCGTGGCGTCGTGGAGGCCGGCGTACCTGGGGAGCACGGAGGGGGAGAGGGCGGAGGGGATGGCGCGGATGGCCGCCGCGGTGGGGGCGCTGGAGGGGGCCCTCGCCGCCGCGGAGGGGAAGCCCTTCTTCGGCGGCGACGCCCCGGGGCTCGTCGACGTCACGCTGGGGTCGGTGATCCCGCGGACGAGGGCGAACGAGGCGCTCACGGGGACCAGGGTGCTCGACGCCGCCAGGACGCCGCTGCTGGCGGCGTGGGCGGAGCGGTTCGGCGAGCTCGACGCCGCCAGGAAGGTGCTCCCGGCCGTCGGCGACGTGGTCGAGTACCTGGAGACGAGGCTCCGGAGGAGTAATGTGGTTATCGCTAGGAAACAGTAG
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| Protein seq | MAAAAAGGGGSPDHELKLLGSTNPSPFVTRVELALALRGLTYDLVAVDLDRKTDLLLAANPVHAKVPVLIHRGRPVCESRVILEYIDDAFPFPGGGGAPLLPPADDPLARAAARFWAAHVDDEFVASWRPAYLGSTEGERAEGMARMAAAVGALEGALAAAEGKPFFGGDAPGLVDVTLGSVIPRTRANEALTGTRVLDAARTPLLAAWAERFGELDAARKVLPAVGDVVEYLETRLRRSNVVIARKQ
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.146393 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0365200 | RBH | 0.0 | 0.0 | 0.693422 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g22310 | RBH | 0.0 | 0.000000 | 0.527153 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0365200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0008170 | RBH | 0.0 | 2.220148 | 1.676319 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0008220 | RBH | 0.0 | 2.005227 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0008110 | RBH | 0.742108 | 0.982144 | 0.583345 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0008390 | RBH | 0.0 | 0.215930 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0008280 | RBH | 2.203863 | 10.892483 | 1.765700 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0198400 | RBH | 1.885728 | 4.44647 | 0.684737 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0008220 | RBH | 0.0 | 0.316366 | 0.426609 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0212100 | RBH | 2.518512 | 4.15756 | 0.995958 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0007960 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0008040 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0008440 | RBH | 0.0 | 3.113530 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0007920 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0008520 | RBH | 0.0 | 2.730520 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G008230 | RBH | 0.0 | 0.624461 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0008250 | RBH | 0.0 | 5.305531 | 0.586965 |
