Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_11g0011500 | OGI:11034370 | 13/50 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr11:12805836-12807737 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | D62_127652_INV1118460,Lemont_127652_INV1127330,R527_127652_INV1126470,NamRoo_127652_INV1123750,NamRoo_127652_INS1124170,R498_127652_INV1123860,HZ_127652_INV1129350,R9311_127652_INV1125910,FS32_127652_OTH1119290,FS32_127652_INV1119210,YX1_127652_INV1121290,MH63RS3_127652_INV1126810,Tumba_127652_INV1122630,II32_127652_DEL1126010,LK638S_127652_INV1130560,TM_127652_INS1121470,WSSM_127652_INS1119100,WSSM_127652_INV1118700,G630_127652_INV1123610,S548_127652_INV1124760,02428_127652_INV1122530,FH838_127652_INS1127340,FH838_127652_INV1127140_2,127742_127652_INV1126510,G8_127652_INS1120740,G8_127652_INV1120570,IR64_127652_INS1123130,IR64_127652_INV1122860,125619_127652_INV1121560,CN1_127652_INS1126860,CN1_127652_INV1126720,G46_127652_INV1119270,132278_127652_INS1124030,132278_127652_INV1123990,LJ_127652_TRA1123140,Basmati1_127652_INV1127840,J4155_127652_INV1122620,XL628S_127652_INV1128820,125827_127652_INS1125860,125827_127652_INV1125530,DHX2_127652_OTH1120230,DHX2_127652_INV1120140,ZS97RS3_127652_INV1128240,DG_127652_INS1124430,DG_127652_INV1124050,117534_127652_INV1117270,ZH11_127652_OTH1122140,ZH11_127652_INV1122070,J4155S_127652_INV1128940,
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| DNA seq | atggagaagcacctggcccttgcgtacatcaggatcaagctaaggtgatcttcattttatcctgatgaatcttagagcaaataggtgtgcatgggcacaatgttctaaaatacatggggaggacggttattaccaggagtgaaagtctcctactacagcatatcagacttaatcagaaccaggagtagtgcactatagttactttctactccatcatgcagataaaccatgaaccagtactgtgttttactactaaatttccccacctccttttcagaatttaagacatcatattcttaTttttttttctattcaaaactatgtgttattctacttctataggaaatttcctatgtatccttttcctcaaggtgttttgtatatctcttttcaagatacttgcataagtatgtattggtaattcttaagtggagtcaataatccatagttttacataggtttccatgatggaacatgaTttttttttaggactaccgactagacgagtaaggtatttatcagttgaatttgccaaaacagaaaatttgatcttctagggcttgtgatgatgaagagacagtgtggtcaacccattcggcaagagtgaaggaaattattttgaggaagatcagcatactgcagaatgctcggttactcacaaggtatttgtggaattgcctcgtaaattttctgcatgttagtgttctatttttttttggcataagtatgcatggtcaaattataattatcagttagttgttatatgttaaatagtagagaaattttaccatccttgaggaagggaggtaccaaataagagccgtagattaaccagaatcgaatggctgaaaggaatcggtacctcgcggtatcgccccaacgtccaccaggtactctgcatggatgagttcattgaggggcaaaattgtattttcgcgtagtcagcggcgttgcctgagcagcccatccccttcctcttcgcacctcacctcgccaggatctggctaagggcggcggcaagaacgactaggatcctcgaatttgctagcgggtaggcaacaagagcgacgaggagatggccaaagtgacaagctgagcatgcaaggattggctcgacttccctccgcttggtccgctcccaccgctgctggttcagtatcgagctaatcccaaccgccctcgatctctggctgatctcttccgtggggacaccttgaattgttctttgttgctattgttcgttttccgccggtccttcttgctgctatgatttgtgttgtggggtttgttggatcaaacataaatggctgtatgctaccctataagctgaattagcagttcgatattgatgaactaaaaacaaggtaaaaattttggatgtgatgtaaataatatcgtttcctttcacccgcctcctagttcctccctcttggcctcttttcagatcaaagcaccaaactcaaattgtttgttgtcatgtgagttccccttgcaaggcatcctacaccttttgatcaatctaatttcactacggcatctgtttcttctttttgttttcccgtcttgtctgtttcgcgagaggaggtaatcgtcgggcttgtgcagatcgagaacaggacgctcagcgaagcggtgctggattccatcatcgtcgagcacggggtctcgccggcggtgaagatgagcatagcggcccacgtctcgcagctcctgaaggcggaatccactgccggccttgatgcgacaggcggccgcggcggggttaatgcgatggcgccgcggcgggagaccacctcgatgcggcgccgccgcggaggccttgatgcgacggcgatgcggcagatggaagggagaagaaaagggtggcacggaggaactcgttattggtcgagtgggcggtga
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| CDS seq | MEKHLALAYIRIKLRACDDEETVWSTHSARVKEIILRKISILQNARLLTRHPTPFDQSNFTTASVSSFCFPVLSVSREEVIVGLVQIENRTLSEAVLDSIIVEHGVSPAVKMSIAAHVSQLLKAESTAGLDATGGRGGVNAMAPRRETTSMRRRRGGLDATAMRQMEGRRKGWHGGTRYWSSGR |
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| Protein seq | MEKHLALAYIRIKLRACDDEETVWSTHSARVKEIILRKISILQNARLLTRHPTPFDQSNFTTASVSSFCFPVLSVSREEVIVGLVQIENRTLSEAVLDSIIVEHGVSPAVKMSIAAHVSQLLKAESTAGLDATGGRGGVNAMAPRRETTSMRRRRGGLDATAMRQMEGRRKGWHGGTRYWSSGR |
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| Function | Chalcone--flavonone isomerase [UniProtKB/Swiss-Prot:Q84T92] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_11g0011500 | OsNaBo_11g0011500.01 | Chr11 | 12805836 | 12807737 | + | NAM | ||
| CDS seq | - |
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| Protein seq | MEKHLALAYIRIKLRACDDEETVWSTHSARVKEIILRKISILQNARLLTRHPTPFDQSNFTTASVSSFCFPVLSVSREEVIVGLVQIENRTLSEAVLDSIIVEHGVSPAVKMSIAAHVSQLLKAESTAGLDATGGRGGVNAMAPRRETTSMRRRRGGLDATAMRQMEGRRKGWHGGTRYWSSGR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_Ung0000020 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0011690 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_Ung0003690 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0011730 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0184800 | RBH | 0.034496 | 0.2382235 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0011590 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0011800 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_Ung0001620 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0011550 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0011320 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0011610 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G011460 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Os XI: R9311 | R9311 | AGIS | NA | NA | NA | NA | NA |
| Os XI-adm: HZ | HZ | PKU | NA | NA | NA | NA | NA |
| Os XI-adm: J4155S | J4155S | PKU | NA | NA | NA | NA | NA |
| Os XI-adm: LK638S | LK638S | PKU | NA | NA | NA | NA | NA |
| Os XI-adm: XL628S | XL628S | PKU | NA | NA | NA | NA | NA |
| Os GJ-temp: 02428 | 02428 | SICAU | NA | NA | NA | NA | NA |
| Os cB: Basmati1 | Basmati1 | SICAU | NA | NA | NA | NA | NA |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | NA | NA | NA | NA | NA |
| Os XI-1A: CN1 | CN1 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1A: D62 | D62 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1A: DG | DG | SICAU | NA | NA | NA | NA | NA |
| Os GJ-temp: DHX2 | DHX2 | SICAU | NA | NA | NA | NA | NA |
| Os XI-adm: FH838 | FH838 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1A: FS32 | FS32 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1A: G46 | G46 | SICAU | NA | NA | NA | NA | NA |
| Os XI-adm: G630 | G630 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: G8 | G8 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1A: II32 | II32 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: J4155 | J4155 | SICAU | NA | NA | NA | NA | NA |
| Os GJ-temp: Kosh | Kosh | SICAU | NA | NA | NA | NA | NA |
| Os GJ-temp: KY131 | KY131 | SICAU | NA | NA | NA | NA | NA |
| Os GJ-trp: Lemont | Lemont | SICAU | NA | NA | NA | NA | NA |
| Os GJ-adm: LJ | LJ | SICAU | NA | NA | NA | NA | NA |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: R498 | R498 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: R527 | R527 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: S548 | S548 | SICAU | NA | NA | NA | NA | NA |
| Os XI-2: TM | TM | SICAU | NA | NA | NA | NA | NA |
| Os XI-3: Tumba | Tumba | SICAU | NA | NA | NA | NA | NA |
| Os XI-adm: WSSM | WSSM | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: Y3551 | Y3551 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: Y58S | Y58S | SICAU | NA | NA | NA | NA | NA |
| Os XI-adm: YX1 | YX1 | SICAU | NA | NA | NA | NA | NA |
| Os GJ-temp: ZH11 | ZH11 | SICAU | NA | NA | NA | NA | NA |
