Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_08G0051100 | OGI:08008750 | 47/50 | Minghui 63 | MH63RS3 | HZAU | Chr08:3461917-3462777 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | - |
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| DNA seq | ATGTACATGGACTTAACCCTAGGAGGAGCACTGCTGCAGGTAGAAGAAGCCACTGAGGAAGAAGAAGAAGAGGAGGAGGAGGAGCAAGCTCTAGGTCAAGAACCTGCACCGGCTGCGGCGGCGGCGGCGCTGGTGCTAGGTCGTCGCCACGGCGTCGTCGTCGGCGGCGGCGGTGGTGGAGTGGTGGTGGCGGCGGAGCGGGAGCACATGTTCGACAAGGTGGTGACGCCGAGCGACGTGGGCAAGCTGAACCGGCTGGTGGTGCCGAAGCAGCACGCGGAGAGGTTCTTCCCGGCGGCGGCCGCCGGCACGCAGCTGTGCTTCGAGGACCGCGCCGGGACGCCATGGCGGTTCCGCTACTCCTACTGGGGGAGCAGCCAGAGCTACGTGATGACCAAGGGGTGGAGCCGCTTCGTCCGCGCCGCCCGCCTCTCCGCCGGCGACACCGTCTCCTTCTCCCGCGCCGCCGACGGCCGCTACTTCATCGACTACCGCCACTGCCACCGCCACGGCGGCCGCGACATCAGCTTCGCCTCCGCCGCCACCGCCATGCCGGCGGCGTGGCCGCTCTTCGGCCGGGTGCAAACGGCGGCGCCGGTCAGCTACGGCGGCGGCCATGGGAGTGCGGCCGCAGCAACGATGTTCTTGGACACGGTGGCGCCCGTCGCCGCCGCCGGCGGCCACCGCGGCGAGGTGGGGCCCTCCGGACAGAGGAGCTTCAGGCTCTTCGGCGTCAATGTCGAGTGCGGCGGCGACGTCGACGCGGCGGCGGAAGAGGAGGATGCCGACGACGACGTCGACGACGGTGATCATCGCCGAGGTGAAGAAATGGAGCTTGTGATGTGGACGAACCATAGGTAG
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| CDS seq | ATGTACATGGACTTAACCCTAGGAGGAGCACTGCTGCAGGTAGAAGAAGCCACTGAGGAAGAAGAAGAAGAGGAGGAGGAGGAGCAAGCTCTAGGTCAAGAACCTGCACCGGCTGCGGCGGCGGCGGCGCTGGTGCTAGGTCGTCGCCACGGCGTCGTCGTCGGCGGCGGCGGTGGTGGAGTGGTGGTGGCGGCGGAGCGGGAGCACATGTTCGACAAGGTGGTGACGCCGAGCGACGTGGGCAAGCTGAACCGGCTGGTGGTGCCGAAGCAGCACGCGGAGAGGTTCTTCCCGGCGGCGGCCGCCGGCACGCAGCTGTGCTTCGAGGACCGCGCCGGGACGCCATGGCGGTTCCGCTACTCCTACTGGGGGAGCAGCCAGAGCTACGTGATGACCAAGGGGTGGAGCCGCTTCGTCCGCGCCGCCCGCCTCTCCGCCGGCGACACCGTCTCCTTCTCCCGCGCCGCCGACGGCCGCTACTTCATCGACTACCGCCACTGCCACCGCCACGGCGGCCGCGACATCAGCTTCGCCTCCGCCGCCACCGCCATGCCGGCGGCGTGGCCGCTCTTCGGCCGGGTGCAAACGGCGGCGCCGGTCAGCTACGGCGGCGGCCATGGGAGTGCGGCCGCAGCAACGATGTTCTTGGACACGGTGGCGCCCGTCGCCGCCGCCGGCGGCCACCGCGGCGAGGTGGGGCCCTCCGGACAGAGGAGCTTCAGGCTCTTCGGCGTCAATGTCGAGTGCGGCGGCGACGTCGACGCGGCGGCGGAAGAGGAGGATGCCGACGACGACGTCGACGACGGTGATCATCGCCGAGGTGAAGAAATGGAGCTTGTGATGTGGACGAACCATAGGTAG
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| Protein seq | MYMDLTLGGALLQVEEATEEEEEEEEEEQALGQEPAPAAAAAALVLGRRHGVVVGGGGGGVVVAAEREHMFDKVVTPSDVGKLNRLVVPKQHAERFFPAAAAGTQLCFEDRAGTPWRFRYSYWGSSQSYVMTKGWSRFVRAARLSAGDTVSFSRAADGRYFIDYRHCHRHGGRDISFASAATAMPAAWPLFGRVQTAAPVSYGGGHGSAAAATMFLDTVAPVAAAGGHRGEVGPSGQRSFRLFGVNVECGGDVDAAAEEEDADDDVDDGDHRRGEEMELVMWTNHR |
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| Function | Putative B3 domain-containing protein Os08g0157700 [UniProtKB/Swiss-Prot:Q7EZD5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_08G0051100 | OsMH63_08T0051100.1 | Chr08 | 3461917 | 3462777 | + | maker | ||
| CDS seq | ATGTACATGGACTTAACCCTAGGAGGAGCACTGCTGCAGGTAGAAGAAGCCACTGAGGAAGAAGAAGAAGAGGAGGAGGAGGAGCAAGCTCTAGGTCAAGAACCTGCACCGGCTGCGGCGGCGGCGGCGCTGGTGCTAGGTCGTCGCCACGGCGTCGTCGTCGGCGGCGGCGGTGGTGGAGTGGTGGTGGCGGCGGAGCGGGAGCACATGTTCGACAAGGTGGTGACGCCGAGCGACGTGGGCAAGCTGAACCGGCTGGTGGTGCCGAAGCAGCACGCGGAGAGGTTCTTCCCGGCGGCGGCCGCCGGCACGCAGCTGTGCTTCGAGGACCGCGCCGGGACGCCATGGCGGTTCCGCTACTCCTACTGGGGGAGCAGCCAGAGCTACGTGATGACCAAGGGGTGGAGCCGCTTCGTCCGCGCCGCCCGCCTCTCCGCCGGCGACACCGTCTCCTTCTCCCGCGCCGCCGACGGCCGCTACTTCATCGACTACCGCCACTGCCACCGCCACGGCGGCCGCGACATCAGCTTCGCCTCCGCCGCCACCGCCATGCCGGCGGCGTGGCCGCTCTTCGGCCGGGTGCAAACGGCGGCGCCGGTCAGCTACGGCGGCGGCCATGGGAGTGCGGCCGCAGCAACGATGTTCTTGGACACGGTGGCGCCCGTCGCCGCCGCCGGCGGCCACCGCGGCGAGGTGGGGCCCTCCGGACAGAGGAGCTTCAGGCTCTTCGGCGTCAATGTCGAGTGCGGCGGCGACGTCGACGCGGCGGCGGAAGAGGAGGATGCCGACGACGACGTCGACGACGGTGATCATCGCCGAGGTGAAGAAATGGAGCTTGTGATGTGGACGAACCATAGGTAG
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| Protein seq | MYMDLTLGGALLQVEEATEEEEEEEEEEQALGQEPAPAAAAAALVLGRRHGVVVGGGGGGVVVAAEREHMFDKVVTPSDVGKLNRLVVPKQHAERFFPAAAAGTQLCFEDRAGTPWRFRYSYWGSSQSYVMTKGWSRFVRAARLSAGDTVSFSRAADGRYFIDYRHCHRHGGRDISFASAATAMPAAWPLFGRVQTAAPVSYGGGHGSAAAATMFLDTVAPVAAAGGHRGEVGPSGQRSFRLFGVNVECGGDVDAAAEEEDADDDVDDGDHRRGEEMELVMWTNHR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 15.3107545 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0157700 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g06120 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0157700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0003910 | RBH | 0.0 | 3.856182 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0003970 | RBH | 0.0 | 2.721376 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0003940 | RBH | 0.0 | 4.195655 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0003930 | RBH | 0.0 | 0.052403 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0003740 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0003610 | RBH | 0.0 | 0.434010 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0056000 | RBH | 0 | 11.4659295 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0003640 | RBH | 0.000000 | 0.336925 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0003650 | RBH | 0.0 | 3.636560 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0003490 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0003760 | RBH | 0.0 | 0.327763 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0003680 | RBH | 0.0 | 7.192777 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G003600 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0003520 | RBH | 0.0 | 15.491615 | 0.0 |
| Os XI: R9311 | R9311 | AGIS | R9311C08g28311 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_08g0041500 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_08g0042100 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_08g0039500 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_08g0042800 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0813142700.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0826907900.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | NA | NA | NA | NA | NA |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0824024900.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1A: DG | DG | SICAU | OsDGG0817608100.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0820799300.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0821560800.01 | SBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0817038500.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0814421300.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0812954900.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0817702300.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0825762500.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0817979500.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0821168900.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0816196300.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0813180700.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0813272500.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0820456700.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0815232500.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0816401700.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0832784700.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0823615000.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0817017900.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0813006300.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0818554700.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0821244000.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0823814700.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0818548500.01 | RBH | None | None | None |
