Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsMH63_05G0334200 | OGI:05058760 | 50/50 | Minghui 63 | MH63RS3 | HZAU | Chr05:22805952-22810475 | ||||||||
Gene Symbol | NAC12,ONAC12,ONAC012 | ||||||||||
Mutant | - | ||||||||||
Stuctural Variations | - |
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DNA seq | CAAAGTTTTTGTTTCACAATAACATAAATGATAAGTAAAGTATCGACATTTATGAAAATGTGTTTGGGTAGAAATTAATTATGTGATAAATTGAACTTCAGATCTTCCTATATATTGAGCGTATGTTTTAGTGTCTGAACAAGTCATCACATAAATACTCTATTCCGGCCGTATGCATTTTGTCTCTCGCCTGTTCAATCACACCAAAAGTTGATAAGTATATTTTGTTGGATTTTTATTGTTCCTGGCAATGATTCAATTGCTCTTGTCAAAAATTGCATCAACAATTAATTCAACAAACGCTACAATTTGATTTTCAGCAGGCTTTTATTAGTTTCCGTTATCATTAAAAAATTGTGTCTTTGAGCTGCCAACTGTCTGAGATCTTTCTCAAAATTTACCATTTGACTGCTAAAATATTTTTTGGCAACACGAAAAAAATAATGAAAATTAGCAACAAAAATTAGAGATCGACCGCCGTTTTCTTGAATTTACGACCGACCGTAAAATCGAATTCCTACATCAAAACCAGTCCAAAAGATCTGCCCAGTCCGTCATGCTGCACTCTACAAGCTCCTCATCGGTTCCTCTCTGCCTCTGCTGCTGTTGCTGCAGCATAGAGCCATCGCAGCCGCCATTGTCGTCGCTGGATGAGGTGCTGTCAAGCCTGTCATCTGGCGCGCTCCTTTTCCTCTTCTGACTCTTCCCGGAGGATTCAGCAGCATCCTCGTTGGCAAACGCAGCCGCGGTGGATGACGGCGCCGCCCGGTTCTCGCCGCCGCCGCCTGCCACCGAGGAGCTCGGCGGCCGGCGATCGAACTGCCGGGGGCACCCTGACCTGGTGTACAGCCGGCACAAGCTGAAGTCACTCCTCGTCTGCGAAATTAACAAGCACAAATTAACGTTTTATATTCCAAGTTGTAGTTTCCCTCACGGCTCGTGCGTCTACAGTAGCTAGCCGCCTCTCATCACGATCACCATTGCAACTAGAGCATAAAGGGGTATGTTTTGTTTTGGAATGAGAAATGATTGAAGTTGCAACTTGACCATGATGTTAGGTTTGTTATATAGGACTTAATTCCATATCTAAAAAAAATAGGATAGGATAAAAAAAAAGAGGCATCTCTAAGTTCAATTTACCTGGAGATAATGGTTCTGTGCCGGAGCAGCGGCGGCTGCGTTGTCGTCGTCTTCCTCGAAGGCCCTGTACTCGTTCATCTTCCACTTGGTCTTGGCCCCCGCCGGCGCGCGGCCGCGGTAGAACACCATGGTCTTCTTGGTGCCGATGGGGCGGCCGTCGGAGGAGTAGACCCACCCCGGCGTGCCCGCGGCCTTCCAGTACCCCGACGGCGTCGTGCGGCTCGGCCGCCCGCCCCGCGCCTCCCGCTCCTGCCGCGGGCAGAAGTAGAACCACGGCTCGCCGTCGCCGGTCCACGCGCCCTGGTGCGCCTCTGCACAACGTAATCAAGAACGACCCCCGTTAGCTAGCGGCGGCGCGAACACGCATTGCACGGCATACGCAAGGTGTAAATACAATTAGCTGCAAGGACGACGACGACGACGATCAACGTGCCTGGGAGCTGCCATGGATCGAGGGAGCAGACGTCGGCGACGGGGATGACGCGCTCGATGTCGGGGACGCGTCGGCCGCCGTCGAGCTTGTGCCGGAGGTAGAAGCACACCAGCTCCTCCTCCGTGGGGTAGAACCGGTACCCCGGAGGCAGCTCTCCCATGTCCGCCGCTGCCCGATCGATCGATCGATCTCAATCCACCCCGTGTGCGGCCGGCCGGCGATGGATCGATGTACGGTGGGCGTCTCTCTCGTGGTGGGTAGCAAAGGCTCGTATATAGAGTGATGAGTACTGGCCGCGAGGCTATATAGGATGCTGGGGGGGGGGGGGGGGGGGGGGGAGGTGTGGTCGTCTGTTGACATGGCGATCGGTATAATTTGCGCGGCTTAATTGGGGAAGAAATTTTCAGCAGATGGTCGTCGTGGAAACCAAGTTTTTTTTTTTTTTTTGGAGTGTTGGGGGTCGCATACTTGCATGGTGCGGTGTAGTACTACACTACTACGACGTGTGTAGTGACCGTGGCGGGAGGAGGGAGGAGGACTGGGTCAGTCTTATCGTTCTCTGAATTTCTTTTGTTAATAACTAGTCATTCCAACCCCTTGGATTAGGGCTTTATAACGATTGACGAATTTAAGCTCGATCGGTTGCTTTCGCCGTTCGCTATCCTTGCTGCACTGTGACATCAGATGGTCGACGCTGCTTGTGGCACTGCCCGCCACTGCCGCACTGGCATCGCAGGATCAGTAAACATGAGGACAAGCGAATTCGATTTTTGTGGTGTGCCTTTTTACAGTTGGAACAGAAAGTGTAAAAAGAAAAAAAACAGAGACATCCAAATATTTTTCATACTAATTAAATGTATAGTGGCCGTGTTTAGTTACTTTTCAAAAAAAAATTATGTATATGGACATACATTTGAAGTATTAAACGTAGACTAATAACAAAACAAATTACAGATTCCGCCTATAAACTGCGAGACGATTCTATTAAGCCTAATTAATCCGTCATTAGCGAATATTTACTGTAGCACCATATTGTCAAATCATAGCGTAATTAGGCTCAGAAGATTCGTCTCGCAATTTACATGCAAACTGTGCAATTAGCATTTTTGGTCCACATTCAATACTCTATGCATGTGTCCAAACATTTGATGTGACGGAAAAGTTGGAAGTTTGAAGGGAACTAAACACAGCCAGTGTAGGGCTAAGCAAGGACTCAATTAGTTTTTCTTTCCAGAATTTATATTAATATTGATCTAATTAAGATGATTTTAACATGGAGGTAATAAACCTAAGGCTCATCACTTGCCCTAGACATGTCTCTGCCCTTGATTGTACCATCTTGATCGATATGGACGCTCCAAATGGGAATGGGTTCATAGATAACCAATGGAATGAAAAATATAAGCCAATGTTTGGTTTAATGTCAAAATCGGCATTTATAAAATTTTGGTATTATCATTTTTTTATATCTCAAAAAAAGTTATTAATAATTTTTGGGTAAGCTTGAAGTTTGTGATAATATTTGTGGTTTGATGTCTTACCAAAATTTGCAGCTTCACTGAATAAGTTACACCCTAGGACAGAAAAGTCACAGTATAAGCAGTGCGCTAATATTTTTTTTTTCGAACGGTCAGGCCGTTGCAGACGTTTTATATAAAAAAGAAAGTGTCCCATTTTAAGGAGAAAACGGGACCAAACCTTACAGTGCACAGTTAATTAGGAAAAACTAGGCGAAAACCACTACTACAACCACAATTTAACTACTCAAGCTGCCAAGACTACAAAGGCAGAGCCCAAAACAGACACTGAAAAAGTGCTCGTCGTAAAGCGACACAAAGACTTTGACTTCGCGAGATAAGTGTTATCGTTGACGAGCTTGTCACCTAGCGACACAGTAGCTCCAACTCCACATCTATCGCATCATCATTGCCAAATGCATCGCCAAAATGAACAAACAACACCGACAACCAACTTTGAGCATTAACCCAAGCCACCAAAGCACCACTTCTCGCGTACAGCAACCACCAGCATCCTTAGAAGACTACAACGTGATACGTTGCCGAGCTTCATCGCACCACAACGAAGCAGCTTTGATTTCACCTAGCAGAAACGAAGAAAGCTAGGCGCTCGCCACATCCAAGAAATGGAACCCAGAAGGCGAAGGCCTCGCTGAACAGCTAGGCCTATAGAGTTTCAACCCAGGAGTTCACTAACGACTATCGTTGCACAGACAAGATTCTTGGTAGTGAGGGAGAAAGGATGCCATAACAATGCTTCCAAGGAGGAAAACGACGTCTAAGGGCGTCGTCGCATCAAGCCAGCTAAGGCTTTCGCCAGCGATTTTCATCCAAAACTACACAACCCACCCGCACAATGAACGTCGCCGGACCACCGCATTGTCCCTCTAGCCATCAAGCCTAGCCCACCAACCACAACACAGGCAAGCTCACGAGACCGCCATGCCGCTGCCATCCTCTGCTGCATAGAGCCATCCCCTCCACCCTTCTCCAAGAGCTTCCCACGACCAGAACAGGAAATCCAGCCATAGGAGAGGAGGAGCTCCACAAGAGGATATTGGTCGGCCGGCAATTGAGAAGACGGCGCCACCGCTGCCAGCCGCTTGAGGCCTGTCACTGGTCGCTACTGCTACTCACGCACGATGCGTGCAGCCGCTGCCACCCGCGGGAAGCCGAAACCAACCGGGAGGAAGCCGGAGACCCACCTCGCAGCCTCCACCAATGCCCCGCTGCCTCCACGTCCCCGCTGCTGCCTCTACGTTGGCGTCGCCTTGCTGTCGCCCGAGGGAGGCTGGATCCAGGTGGGAGGAGGACGGGAGAACATCCCTGCCGCCTCCACCGTCGCCATGGCGCCACGACGCCCGCGCCGTCGCTCGCGGGAAGCCGAATCCAAGCGGAAGGAGCCCGGAAGACACACCTCATCGCCTCCACCAT
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CDS seq | MVEAMRCVFRAPSAWIRLPASDGAGVVAPWRRWRRQGCSPVLLPPGSSLPRATARRRQRRGSSGDVEAAGHWWRLRAADMGELPPGYRFYPTEEELVCFYLRHKLDGGRRVPDIERVIPVADVCSLDPWQLPGTLIVVVVVLAANCIYTLQAHQGAWTGDGEPWFYFCPRQEREARGGRPSRTTPSGYWKAAGTPGWVYSSDGRPIGTKKTMVFYRGRAPAGAKTKWKMNEYRAFEEDDDNAAAAAPAQNHYLQTRSDFSLCRLYTRSGCPRQFDRRPPSSSVAGGGGENRAAPSSTAAAFANEDAAESSGKSQKRKRSAPDDRLDSTSSSDDNGGCDGSMLQQQQQRQRGTDEELVECSMTDWADLLDWF |
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Protein seq | MVEAMRCVFRAPSAWIRLPASDGAGVVAPWRRWRRQGCSPVLLPPGSSLPRATARRRQRRGSSGDVEAAGHWWRLRAADMGELPPGYRFYPTEEELVCFYLRHKLDGGRRVPDIERVIPVADVCSLDPWQLPGTLIVVVVVLAANCIYTLQAHQGAWTGDGEPWFYFCPRQEREARGGRPSRTTPSGYWKAAGTPGWVYSSDGRPIGTKKTMVFYRGRAPAGAKTKWKMNEYRAFEEDDDNAAAAAPAQNHYLQTRSDFSLCRLYTRSGCPRQFDRRPPSSSVAGGGGENRAAPSSTAAAFANEDAAESSGKSQKRKRSAPDDRLDSTSSSDDNGGCDGSMLQQQQQRQRGTDEELVECSMTDWADLLDWF |
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Function | NAC domain-containing protein 90 [UniProtKB/Swiss-Prot:Q9FMR3] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsMH63_05G0334200 | OsMH63_05T0334200-mRNA-1 | Chr05 | 22805952 | 22810475 | - | maker | ||
CDS seq | ATGGTGGAGGCGATGAGGTGTGTCTTCCGGGCTCCTTCCGCTTGGATTCGGCTTCCCGCGAGCGACGGCGCGGGCGTCGTGGCGCCATGGCGACGGTGGAGGCGGCAGGGATGTTCTCCCGTCCTCCTCCCACCTGGATCCAGCCTCCCTCGGGCGACAGCAAGGCGACGCCAACGTAGAGGCAGCAGCGGGGACGTGGAGGCAGCGGGGCATTGGTGGAGGCTGCGAGCGGCGGACATGGGAGAGCTGCCTCCGGGGTACCGGTTCTACCCCACGGAGGAGGAGCTGGTGTGCTTCTACCTCCGGCACAAGCTCGACGGCGGCCGACGCGTCCCCGACATCGAGCGCGTCATCCCCGTCGCCGACGTCTGCTCCCTCGATCCATGGCAGCTCCCAGGCACGTTGATCGTCGTCGTCGTCGTCCTTGCAGCTAATTGTATTTACACCTTGCAGGCGCACCAGGGCGCGTGGACCGGCGACGGCGAGCCGTGGTTCTACTTCTGCCCGCGGCAGGAGCGGGAGGCGCGGGGCGGGCGGCCGAGCCGCACGACGCCGTCGGGGTACTGGAAGGCCGCGGGCACGCCGGGGTGGGTCTACTCCTCCGACGGCCGCCCCATCGGCACCAAGAAGACCATGGTGTTCTACCGCGGCCGCGCGCCGGCGGGGGCCAAGACCAAGTGGAAGATGAACGAGTACAGGGCCTTCGAGGAAGACGACGACAACGCAGCCGCCGCTGCTCCGGCACAGAACCATTATCTCCAGACGAGGAGTGACTTCAGCTTGTGCCGGCTGTACACCAGGTCAGGGTGCCCCCGGCAGTTCGATCGCCGGCCGCCGAGCTCCTCGGTGGCAGGCGGCGGCGGCGAGAACCGGGCGGCGCCGTCATCCACCGCGGCTGCGTTTGCCAACGAGGATGCTGCTGAATCCTCCGGGAAGAGTCAGAAGAGGAAAAGGAGCGCGCCAGATGACAGGCTTGACAGCACCTCATCCAGCGACGACAATGGCGGCTGCGATGGCTCTATGCTGCAGCAACAGCAGCAGAGGCAGAGAGGAACCGATGAGGAGCTTGTAGAGTGCAGCATGACGGACTGGGCAGATCTTTTGGACTGGTTTTGA
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Protein seq | MVEAMRCVFRAPSAWIRLPASDGAGVVAPWRRWRRQGCSPVLLPPGSSLPRATARRRQRRGSSGDVEAAGHWWRLRAADMGELPPGYRFYPTEEELVCFYLRHKLDGGRRVPDIERVIPVADVCSLDPWQLPGTLIVVVVVLAANCIYTLQAHQGAWTGDGEPWFYFCPRQEREARGGRPSRTTPSGYWKAAGTPGWVYSSDGRPIGTKKTMVFYRGRAPAGAKTKWKMNEYRAFEEDDDNAAAAAPAQNHYLQTRSDFSLCRLYTRSGCPRQFDRRPPSSSVAGGGGENRAAPSSTAAAFANEDAAESSGKSQKRKRSAPDDRLDSTSSSDDNGGCDGSMLQQQQQRQRGTDEELVECSMTDWADLLDWF
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.092072 | 18.846619 | 0.138334 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0442700 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g37080 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os05g0442700 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0018840 | RBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0018770 | RBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0018650 | RBH | 0.0 | 0.0 | 0.000000 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0018660 | RBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0018890 | RBH | 0.0 | 0.0 | 0.0 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0613900 | RBH | 1.1914435 | 15.776261 | 2.1388865 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0018410 | RBH | 0.0 | 0.0 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0344800 | RBH | 0.160259 | 31.3342955 | 0.0163305 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0018710 | RBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0018650 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0018750 | RBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0018820 | RBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0018840 | RBH | 0.0 | 3.319018 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G018320 | RBH | 0.0 | 0.0 | 0.0 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0018640 | RBH | 0.0 | 0.0 | 0.0 |
Os XI: R9311 | R9311 | AGIS | R9311C05g20163 | RBH | None | None | None |
Os XI-adm: HZ | HZ | PKU | OsHZ_05g0221500 | RBH | None | None | None |
Os XI-adm: J4155S | J4155S | PKU | OsJ4155_05g0223900 | RBH | None | None | None |
Os XI-adm: LK638S | LK638S | PKU | OsLK638S_05g0215900 | RBH | None | None | None |
Os XI-adm: XL628S | XL628S | PKU | OsXL628S_05g0227300 | RBH | None | None | None |
Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0509037000.01 | RBH | None | None | None |
Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0520042800.01 | RBH | None | None | None |
Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_023277 | RBH | None | None | None |
Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0517267000.01 | RBH | None | None | None |
Os XI-1A: D62 | D62 | SICAU | OsD62G0519207800.01 | RBH | None | None | None |
Os XI-1A: DG | DG | SICAU | OsDGG0511049800.01 | RBH | None | None | None |
Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0512599800.01 | RBH | None | None | None |
Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0514952600.01 | RBH | None | None | None |
Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0512082600.01 | RBH | None | None | None |
Os XI-1A: G46 | G46 | SICAU | OsG46G0510036000.01 | RBH | None | None | None |
Os XI-adm: G630 | G630 | SICAU | OsG630G0508972800.01 | RBH | None | None | None |
Os XI-1B: G8 | G8 | SICAU | OsG8G0512033800.01 | RBH | None | None | None |
Os XI-1A: II32 | II32 | SICAU | OsII32G0518981000.01 | RBH | None | None | None |
Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0511384600.01 | RBH | None | None | None |
Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0512754400.01 | RBH | None | None | None |
Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0511361200.01 | RBH | None | None | None |
Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0509046800.01 | RBH | None | None | None |
Os GJ-adm: LJ | LJ | SICAU | OsLJG0509054600.01 | RBH | None | None | None |
Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0512567400.01 | RBH | None | None | None |
Os XI-1B: R498 | R498 | SICAU | OsR498G0510936200.01 | RBH | None | None | None |
Os XI-1B: R527 | R527 | SICAU | OsR527G0511192000.01 | RBH | None | None | None |
Os XI-1B: S548 | S548 | SICAU | OsS548G0524784200.01 | RBH | None | None | None |
Os XI-2: TM | TM | SICAU | TMG0514782400.01 | RBH | None | None | None |
Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0510336000.01 | RBH | None | None | None |
Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0509000200.01 | RBH | None | None | None |
Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0511991600.01 | RBH | None | None | None |
Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0512197000.01 | RBH | None | None | None |
Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0515638800.01 | RBH | None | None | None |
Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0510602400.01 | RBH | None | None | None |