Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_03G0351600 | OGI:03057530 | 49/50 | Minghui 63 | MH63RS3 | HZAU | Chr03:22752160-22756868 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | NamRoo_MH63RS3_INS0303120,02428_MH63RS3_INS0302080,Basmati1_MH63RS3_INS0321610,128077_MH63RS3_DEL0338890,ZH11_MH63RS3_INS0302170,DHX2_MH63RS3_INS0302170,KY131_MH63RS3_INS0302030,Kosh_MH63RS3_INS0302010,132278_MH63RS3_INS0303350,117425_MH63RS3_INS0340210,OglaRS2_MH63RS3_INS0329450,Nipponbare_MH63RS3_INS0302160,LJ_MH63RS3_INS0302410,
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| DNA seq | TTATCGGTCGTGCTTCTTTTTAAGAACTTCCCTTCCCACGTATAAATCTAAGTAACCCTGCAACACAAAATTATAGCTCATTGTAAAATGCACCTAAATTACCACTCATGGCCATGGAACAGAAGATATCAAATAAAAACAGGGAGAGCATTGGCATAATACCTGAACGAGTTTCTCTAGATTCTGAGATTCTTCTAACAAAAATCTACAGGCATCTATCTCTGTCAGAGGGACCTTTGAGCCCAACACGGTGGTCACTTTTTCCACAGCCTTCCTCACTATAATTTTGTGGACTTCCCGGGATAACAGCCCATCTTCCCACAATGGCTTTATGATATTTTTTATGAATTCACAGAGGTTACACTTGAATACATCAATGGACATGCTACTTTCTTCAACTATGCTTTGCTGAGATGGTCCACTATGTGAATTAGGTGACTGGAACCTATTTCCATCTTTCCTTTCGCAAATTCCTCCAGTAAGTTCAATTGGCTCAGGTCGCTTAGACTGTTCTTTCTGCAGAGTGGGCTTACAAGAGGAAGCTGAAAGACTCTTGATATTATTCTGGGGATTTGTACCATCCCCATTTACCTGAAAAGTCACATTCTCAACTGGCTCTAGCTCATCATCTGTATTCATATTAGGCAAGCAATTTAAGTCTGGTATCGAGGAACATGAATCCCAATCAGCTTGTCTAGTAGTACAAGGATTATCTCTGTCAGAATCAAACTGATGGGGTATTTGTTGGTTTGATGCCACTTTGAGAGCTTGTGATGGTTCCCCACTCTCTTTATGATGTGTATCCTGTTCAGAGTCTGCATGTTGTGAATTCTCTTGTTTGATTCTCACAATGTTGCAATCCACGGCGCCCCATTGGATGACTCTAAAGTTACTTCCTGTGGAAAGATTGACAGGCTTCTCTAGGAACTTGTTTGCAGTTCCTTTATCCAATTTTGTCACACCGCACGGAGTAGTGTCACTGTCCTGATTTGAACACGCTGACACATTTACTACCTTCACACTATCATCATCCATTGAGCAAAGAACAGCAGCTTTTTTGTCCAGCAATTCCGGAACAGTTGATTGCTCACCTGATTTGGCACCATCAGCTTCCAGTGTATTTTCAATGTCACAGCCAACAACCAATTCATGTCTGCTCCTTGCGTTGGAATGACCTTCAATTGCTCCCTGCTGAGAAAACTTCTGATGCACACTACTTTCCGGATGAGAATCAGCAACTGGTTTCGTGCTAGTATCAGAACAGCCATTCCAACAACATGAAAGGTCATCTTGTTCTTTCTGCTGCATAACTTCACTAGGATTTGTTTCTGGTGGAACATCCTGATAAAACATTAGTCCTTTCTCAGCTATTGTATTTTGTGGGCTTTTCATGCGATTGTCGCCACTAAGGGATTTGAAGGGTTGCTCTGACTCTCTCTCAGTTCTTCCTTTGCTACACTTTTGTGCTTCACTGGATGACATTACACCTCTACATTGTTTGGAGTCCTCAGATGGACTATTACTTTCATCATCGCTTTCTGAGCTAACAGAAGCACTCCCTGATGTGCTGCTGTTTTCATCATCAAATCCTGAGCTAGGTCTTCCATTTCTCAATCTTTCGCTCACAGATACCTTGCTTGTTTGCACTGTCCGATTTGTATTGGTTTTTTTTACATTTTCAGCTTCAGCACAATTATCTTTCTTCAATCTTCTCCATATAATCAAACAATCACGAAGTAGTTCAGACGGAGAAGCATTATCTGATTCTTTCACACCATTCTCCACATAGGTGACTGGAGCATCTTGTAGTTTACCATTCGAAACCTCATCACTCTTCACGTCTTCTGTTTTTTTTGTGCAAACAACCAAACTAGGCTTCTTTTCAGACTCTAACTTAATGTTCTCACTTCCTTCACTTTGTTTTGGTCCATTTGATGACATAATGGTTTTACTTCTACACTTAGGACTTAACAAACCTGAATTCTCATTAGACTTTGAGCCACTACATACAACAGTTGGAATATTGTTGTTTCGATGATAGTTCCCTTTTTCTCCATTTTGACCTCCTTTCTTGATTTTTTTGGTATTTCCCTCCTGATTATCACCACTCTGGCGTACATCACCATGAGAATATGATTGCCAATCCTTCATGTTCGGATAGCAGGATTCTTTAGACTGATTTTCAGACGGCATATTCCTCTTAGCTCTATGTCCATCCAGATGATTGCCATGCCTTTTCCGGTCACTGTTTCTCCCATACGTACTATGAAAAGCAACATTGGAATTCTTTTTCTTGAGATCATGTTTTGTGCATTGCCTTCTTGACATCTTTCCTTTATGAACATTCCTGAAATTTCGACTGCTACCCAATTGGTCCCTAAAATTATCACGTGGAGATTGGTGAAGTTGCTCATGATGGAATGCATGAAATTCATCAAATGCCTTACTGGTGTGAGCTCTCCCTACTTCAAACCTATGACATGTTCGACCAACCAAGGAGTGATCAGAAATATTAAACATCAAATCTTTTGAACAGGTGCCCTGATGCTTCTTGCAAGTCTGGAACTTTTCCATGTAAGATCGATGCCTTGCTTTATCTATCGCTGAGAAATGGGCATTTGGGAAGTTAACTTCAGTTGGCAGACGTTGAACTTCTTGATAACTTCTATTTTGTGTGCAACTCCCCTGATTAGATGAAAAGAAGTCCCCAAGTCTTTCTGTTGTACACATATGTCCATCTGCACCTTTTGCATACTCAGACACACGATTGAGGGAAGGAACTTCTCCCTCAGTCCTAGATTAAGGAACAAACAATTGAATCAGATAATAGTAATACACATAAACAGGTGCATGCTGCCACCGAAAAATCTAGATCTGCACCTAAAAAATATTACCTTAGACAACTTGTCGGAGCATGATCAGGAGAAAGACTATGGTTGCCCCATTTTGATGAATCGCGAGGACAAGCACGACCTTCACCATGATATCCATCAATCTTATTTCCAAAGGGATAACTGTAATAACAGAAGATAGATCATAACATGGTGCACATATTTATTTTGTTAGGAAGGAAATCTTTAAGGAATGCACAGATCATAAAATGCAGAATATTGACCAATACAACATGCGAGAACATCAAAGTGGGAAATAAAAGAGTAAATTTCACAAAATCACATATAATTATGGCAAAACTAGATTTAGAGAAACTATATTGCAAAACTAGAGTACTTCTCTACCGCAAAACTACAAATTTTAGACTTTACAATCTCCATCGCTAGCAGTGATAACATAACAAGAGGGCCCCACCTGCAGCCTCATGTCTTTACACAAATGGAAGCAGAAAAGAACAAAGCTCCAAAAGTCTTTCTTCAAAGCAGGCTTGCAGTGGCAAGATCAATAACAGTTACAGTCATGACCCTAGAAAATGGCTTGCATGTCACGGGGCAATCTAGCCAGTGGTAGCACCTTGGCAGGAGATAGTCAGTCGCTTGGACAGTAAGTGGTAACGTATGCAACTCATGTTTTGCTTCCATTGGTGAAACATGCTGCGTGATGCTTTGTGAGGCTACAAGTTGAGCCCTCTTGTCAGGTCATACTTCAAAGTGGTAGGGATGGATATTCTAATTCCTAAATACGGTCATCTCTCTTAAATCTATATTTTTTGCTATAATTTTATCGACTCAACAAAAAATATGGCAGGATTTGTTAGAATTTCAATGGTTACTCTCATTGAGAAGAGGATGGCACTCGAGATGGGGCAATTTTCTGGTTTTTCTTCATTCACTAAACACAAAAGCCATGTCCTCCCAAAGAGGATTGGATACATATTTATAGCTGCTTGTAGCAGCCATGCAGCCATGCTAGTCTAAGAGGGTGCTGTCCTAGAGCATCCCAACAAACTGTCCTAGAGCAGAGCATCCCAACAAACTGTCCTAGAGCATCTCAACAAACTGCTGTCCTAACTGTCCTAGAGCATTCAAACTGAAAGTAGAGATGCTGTCCTAGAAAGCTGAAAAGCAGGAAAAGGCACCACAAGACCAAGACCAACCAGCCAAGACTTATTCCTACAGGATTAACCAAATTTATGAATGTCAATAGTTTGGTAACATATACACACCTCTTCATACAATATCTAGGGGAGGAGCTGCGCCTGTGTCGCTTTGACTCCAGGAGTCCAGTTCGATCAAGAGGTTGGTCCCATATAGCAAAATTCTTCTCAGTTTCAGCATCATCATGTGAGGAGGACACAAGATCCTTAGTTTCTTCCTCCCTAAAAGAATGGCTACAACTTCTATCATTCAAAGTTTTGCCATGACTATGCAGCAAATCATGTCCTCTAAACTGATGTGGAATTTCTGTAGCAGCAACAGAATCTTCTATCCTGTCTCTGCATCATAAATTGCATTAGTGAAACTACTACTGGATAGAGAAACTAACAACATGACGACCATAAATTGGAGAAAATTGCATATGTACCATCACATAAGATTGGATTCGCTAGAATACCATCACTTAAATTGGCTTCACTAGAATATCATTCTCAACCAGGGCATATTTGCCAAAATACCATCCTGGACAGAAATAGCCTTGGCCCTTATTCTTCCTCCCTCCAATGCTGGAAGAGCTTGCCGGCAGCCCTCCCGTCGTTTCCGCCTTCCATCCCGGCCACTGCGCCAGCACCCTCGAGCCTTGTCACGATGGCTAGCCAT
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| CDS seq | ATGGCTAGCCATCGTGACAAGGCTCGAGGGTGCTGGCGCAGTGGCCGGGATGGAAGGCGGAAACGACGGGAGGGCTGCCGGCAAGCTCTTCCAGCATTGGAGGGAGGAAGAATAAGGGCCAAGGCTATTTCTGTCCAGGATGAAATTCCACATCAGTTTAGAGGACATGATTTGCTGCATAGTCATGGCAAAACTTTGAATGATAGAAGTTGTAGCCATTCTTTTAGGGAGGAAGAAACTAAGGATCTTGTGTCCTCCTCACATGATGATGCTGAAACTGAGAAGAATTTTGCTATATGGGACCAACCTCTTGATCGAACTGGACTCCTGGAGTCAAAGCGACACAGGCGCAGCTCCTCCCCTAGATATTGTATGAAGAGTTATCCCTTTGGAAATAAGATTGATGGATATCATGGTGAAGGTCGTGCTTGTCCTCGCGATTCATCAAAATGGGGCAACCATAGTCTTTCTCCTGATCATGCTCCGACAAGTTGTCTAAGGACTGAGGGAGAAGTTCCTTCCCTCAATCGTGTGTCTGAGTATGCAAAAGGTGCAGATGGACATATGTGTACAACAGAAAGACTTGGGGACTTCTTTTCATCTAATCAGGGGAGTTGCACACAAAATAGAAGTTATCAAGAAGTTCAACGTCTGCCAACTGAAGTTAACTTCCCAAATGCCCATTTCTCAGCGATAGATAAAGCAAGGCATCGATCTTACATGGAAAAGTTCCAGACTTGCAAGAAGCATCAGGGCACCTGTTCAAAAGATTTGATGTTTAATATTTCTGATCACTCCTTGGTTGGTCGAACATGTCATAGGTTTGAAGTAGGGAGAGCTCACACCAGTAAGGCATTTGATGAATTTCATGCATTCCATCATGAGCAACTTCACCAATCTCCACGTGATAATTTTAGGGACCAATTGGGTAGCAGTCGAAATTTCAGGAATGTTCATAAAGGAAAGATGTCAAGAAGGCAATGCACAAAACATGATCTCAAGAAAAAGAATTCCAATGTTGCTTTTCATAGTACGTATGGGAGAAACAGTGACCGGAAAAGGCATGGCAATCATCTGGATGGACATAGAGCTAAGAGGAATATGCCGTCTGAAAATCAGTCTAAAGAATCCTGCTATCCGAACATGAAGGATTGGCAATCATATTCTCATGGTGATGTACGCCAGAGTGGTGATAATCAGGAGGGAAATACCAAAAAAATCAAGAAAGGAGGTCAAAATGGAGAAAAAGGGAACTATCATCGAAACAACAATATTCCAACTGTTGTATGTAGTGGCTCAAAGTCTAATGAGAATTCAGGTTTGTTAAGTCCTAAGTGTAGAAGTAAAACCATTATGTCATCAAATGGACCAAAACAAAGTGAAGGAAGTGAGAACATTAAGTTAGAGTCTGAAAAGAAGCCTAGTTTGGTTGTTTGCACAAAAAAAACAGAAGACGTGAAGAGTGATGAGGTTTCGAATGGTAAACTACAAGATGCTCCAGTCACCTATGTGGAGAATGGTGTGAAAGAATCAGATAATGCTTCTCCGTCTGAACTACTTCGTGATTGTTTGATTATATGGAGAAGATTGAAGAAAGATAATTGTGCTGAAGCTGAAAATGTAAAAAAAACCAATACAAATCGGACAGTGCAAACAAGCAAGGTATCTGTGAGCGAAAGATTGAGAAATGGAAGACCTAGCTCAGGATTTGATGATGAAAACAGCAGCACATCAGGGAGTGCTTCTGTTAGCTCAGAAAGCGATGATGAAAGTAATAGTCCATCTGAGGACTCCAAACAATGTAGAGGTGTAATGTCATCCAGTGAAGCACAAAAGTGTAGCAAAGGAAGAACTGAGAGAGAGTCAGAGCAACCCTTCAAATCCCTTAGTGGCGACAATCGCATGAAAAGCCCACAAAATACAATAGCTGAGAAAGGACTAATGTTTTATCAGGATGTTCCACCAGAAACAAATCCTAGTGAAGTTATGCAGCAGAAAGAACAAGATGACCTTTCATGTTGTTGGAATGGCTGTTCTGATACTAGCACGAAACCAGTTGCTGATTCTCATCCGGAAAGTAGTGTGCATCAGAAGTTTTCTCAGCAGGGAGCAATTGAAGGTCATTCCAACGCAAGGAGCAGACATGAATTGGTTGTTGGCTGTGACATTGAAAATACACTGGAAGCTGATGGTGCCAAATCAGGTGAGCAATCAACTGTTCCGGAATTGCTGGACAAAAAAGCTGCTGTTCTTTGCTCAATGGATGATGATAGTGTGAAGGTAGTAAATGTGTCAGCGTGTTCAAATCAGGACAGTGACACTACTCCGTGCGGTGTGACAAAATTGGATAAAGGAACTGCAAACAAGTTCCTAGAGAAGCCTGTCAATCTTTCCACAGGAAGTAACTTTAGAGTCATCCAATGGGGCGCCGTGGATTGCAACATTGTGAGAATCAAACAAGAGAATTCACAACATGCAGACTCTGAACAGGATACACATCATAAAGAGAGTGGGGAACCATCACAAGCTCTCAAAGTGGCATCAAACCAACAAATACCCCATCAGTTTGATTCTGACAGAGATAATCCTTGTACTACTAGACAAGCTGATTGGGATTCATGTTCCTCGATACCAGACTTAAATTGCTTGCCTAATATGAATACAGATGATGAGCTAGAGCCAGTTGAGAATGTGACTTTTCAGGTAAATGGGGATGGTACAAATCCCCAGAATAATATCAAGAGTCTTTCAGCTTCCTCTTGTAAGCCCACTCTGCAGAAAGAACAGTCTAAGCGACCTGAGCCAATTGAACTTACTGGAGGAATTTGCGAAAGGAAAGATGGAAATAGGTTCCAGTCACCTAATTCACATAGTGGACCATCTCAGCAAAGCATAGTTGAAGAAAGTAGCATGTCCATTGATGTATTCAAGTGTAACCTCTGTGAATTCATAAAAAATATCATAAAGCCATTGTGGGAAGATGGGCTGTTATCCCGGGAAGTCCACAAAATTATAGTGAGGAAGGCTGTGGAAAAAGTGACCACCGTGTTGGGCTCAAAGGTCCCTCTGACAGAGATAGATGCCTGTAGATTTTTGTTAGAAGAATCTCAGAATCTAGAGAAACTCGTTCAGGGTTACTTAGATTTATACGTGGGAAGGGAAGTTCTTAAAAAGAAGCACGACCGATAA
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| Protein seq | MASHRDKARGCWRSGRDGRRKRREGCRQALPALEGGRIRAKAISVQDEIPHQFRGHDLLHSHGKTLNDRSCSHSFREEETKDLVSSSHDDAETEKNFAIWDQPLDRTGLLESKRHRRSSSPRYCMKSYPFGNKIDGYHGEGRACPRDSSKWGNHSLSPDHAPTSCLRTEGEVPSLNRVSEYAKGADGHMCTTERLGDFFSSNQGSCTQNRSYQEVQRLPTEVNFPNAHFSAIDKARHRSYMEKFQTCKKHQGTCSKDLMFNISDHSLVGRTCHRFEVGRAHTSKAFDEFHAFHHEQLHQSPRDNFRDQLGSSRNFRNVHKGKMSRRQCTKHDLKKKNSNVAFHSTYGRNSDRKRHGNHLDGHRAKRNMPSENQSKESCYPNMKDWQSYSHGDVRQSGDNQEGNTKKIKKGGQNGEKGNYHRNNNIPTVVCSGSKSNENSGLLSPKCRSKTIMSSNGPKQSEGSENIKLESEKKPSLVVCTKKTEDVKSDEVSNGKLQDAPVTYVENGVKESDNASPSELLRDCLIIWRRLKKDNCAEAENVKKTNTNRTVQTSKVSVSERLRNGRPSSGFDDENSSTSGSASVSSESDDESNSPSEDSKQCRGVMSSSEAQKCSKGRTERESEQPFKSLSGDNRMKSPQNTIAEKGLMFYQDVPPETNPSEVMQQKEQDDLSCCWNGCSDTSTKPVADSHPESSVHQKFSQQGAIEGHSNARSRHELVVGCDIENTLEADGAKSGEQSTVPELLDKKAAVLCSMDDDSVKVVNVSACSNQDSDTTPCGVTKLDKGTANKFLEKPVNLSTGSNFRVIQWGAVDCNIVRIKQENSQHADSEQDTHHKESGEPSQALKVASNQQIPHQFDSDRDNPCTTRQADWDSCSSIPDLNCLPNMNTDDELEPVENVTFQVNGDGTNPQNNIKSLSASSCKPTLQKEQSKRPEPIELTGGICERKDGNRFQSPNSHSGPSQQSIVEESSMSIDVFKCNLCEFIKNIIKPLWEDGLLSREVHKIIVRKAVEKVTTVLGSKVPLTEIDACRFLLEESQNLEKLVQGYLDLYVGREVLKKKHDR |
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| Function | Zinc finger CCCH domain-containing protein 55 [UniProtKB/Swiss-Prot:Q6YYC0] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0351600 | OsMH63_03T0351600.1 | Chr03 | 22752160 | 22756868 | - | maker | ||
| CDS seq | ATGGCTAGCCATCGTGACAAGGCTCGAGGGTGCTGGCGCAGTGGCCGGGATGGAAGGCGGAAACGACGGGAGGGCTGCCGGCAAGCTCTTCCAGCATTGGAGGGAGGAAGAATAAGGGCCAAGGCTATTTCTGTCCAGGATGAAATTCCACATCAGTTTAGAGGACATGATTTGCTGCATAGTCATGGCAAAACTTTGAATGATAGAAGTTGTAGCCATTCTTTTAGGGAGGAAGAAACTAAGGATCTTGTGTCCTCCTCACATGATGATGCTGAAACTGAGAAGAATTTTGCTATATGGGACCAACCTCTTGATCGAACTGGACTCCTGGAGTCAAAGCGACACAGGCGCAGCTCCTCCCCTAGATATTGTATGAAGAGTTATCCCTTTGGAAATAAGATTGATGGATATCATGGTGAAGGTCGTGCTTGTCCTCGCGATTCATCAAAATGGGGCAACCATAGTCTTTCTCCTGATCATGCTCCGACAAGTTGTCTAAGGACTGAGGGAGAAGTTCCTTCCCTCAATCGTGTGTCTGAGTATGCAAAAGGTGCAGATGGACATATGTGTACAACAGAAAGACTTGGGGACTTCTTTTCATCTAATCAGGGGAGTTGCACACAAAATAGAAGTTATCAAGAAGTTCAACGTCTGCCAACTGAAGTTAACTTCCCAAATGCCCATTTCTCAGCGATAGATAAAGCAAGGCATCGATCTTACATGGAAAAGTTCCAGACTTGCAAGAAGCATCAGGGCACCTGTTCAAAAGATTTGATGTTTAATATTTCTGATCACTCCTTGGTTGGTCGAACATGTCATAGGTTTGAAGTAGGGAGAGCTCACACCAGTAAGGCATTTGATGAATTTCATGCATTCCATCATGAGCAACTTCACCAATCTCCACGTGATAATTTTAGGGACCAATTGGGTAGCAGTCGAAATTTCAGGAATGTTCATAAAGGAAAGATGTCAAGAAGGCAATGCACAAAACATGATCTCAAGAAAAAGAATTCCAATGTTGCTTTTCATAGTACGTATGGGAGAAACAGTGACCGGAAAAGGCATGGCAATCATCTGGATGGACATAGAGCTAAGAGGAATATGCCGTCTGAAAATCAGTCTAAAGAATCCTGCTATCCGAACATGAAGGATTGGCAATCATATTCTCATGGTGATGTACGCCAGAGTGGTGATAATCAGGAGGGAAATACCAAAAAAATCAAGAAAGGAGGTCAAAATGGAGAAAAAGGGAACTATCATCGAAACAACAATATTCCAACTGTTGTATGTAGTGGCTCAAAGTCTAATGAGAATTCAGGTTTGTTAAGTCCTAAGTGTAGAAGTAAAACCATTATGTCATCAAATGGACCAAAACAAAGTGAAGGAAGTGAGAACATTAAGTTAGAGTCTGAAAAGAAGCCTAGTTTGGTTGTTTGCACAAAAAAAACAGAAGACGTGAAGAGTGATGAGGTTTCGAATGGTAAACTACAAGATGCTCCAGTCACCTATGTGGAGAATGGTGTGAAAGAATCAGATAATGCTTCTCCGTCTGAACTACTTCGTGATTGTTTGATTATATGGAGAAGATTGAAGAAAGATAATTGTGCTGAAGCTGAAAATGTAAAAAAAACCAATACAAATCGGACAGTGCAAACAAGCAAGGTATCTGTGAGCGAAAGATTGAGAAATGGAAGACCTAGCTCAGGATTTGATGATGAAAACAGCAGCACATCAGGGAGTGCTTCTGTTAGCTCAGAAAGCGATGATGAAAGTAATAGTCCATCTGAGGACTCCAAACAATGTAGAGGTGTAATGTCATCCAGTGAAGCACAAAAGTGTAGCAAAGGAAGAACTGAGAGAGAGTCAGAGCAACCCTTCAAATCCCTTAGTGGCGACAATCGCATGAAAAGCCCACAAAATACAATAGCTGAGAAAGGACTAATGTTTTATCAGGATGTTCCACCAGAAACAAATCCTAGTGAAGTTATGCAGCAGAAAGAACAAGATGACCTTTCATGTTGTTGGAATGGCTGTTCTGATACTAGCACGAAACCAGTTGCTGATTCTCATCCGGAAAGTAGTGTGCATCAGAAGTTTTCTCAGCAGGGAGCAATTGAAGGTCATTCCAACGCAAGGAGCAGACATGAATTGGTTGTTGGCTGTGACATTGAAAATACACTGGAAGCTGATGGTGCCAAATCAGGTGAGCAATCAACTGTTCCGGAATTGCTGGACAAAAAAGCTGCTGTTCTTTGCTCAATGGATGATGATAGTGTGAAGGTAGTAAATGTGTCAGCGTGTTCAAATCAGGACAGTGACACTACTCCGTGCGGTGTGACAAAATTGGATAAAGGAACTGCAAACAAGTTCCTAGAGAAGCCTGTCAATCTTTCCACAGGAAGTAACTTTAGAGTCATCCAATGGGGCGCCGTGGATTGCAACATTGTGAGAATCAAACAAGAGAATTCACAACATGCAGACTCTGAACAGGATACACATCATAAAGAGAGTGGGGAACCATCACAAGCTCTCAAAGTGGCATCAAACCAACAAATACCCCATCAGTTTGATTCTGACAGAGATAATCCTTGTACTACTAGACAAGCTGATTGGGATTCATGTTCCTCGATACCAGACTTAAATTGCTTGCCTAATATGAATACAGATGATGAGCTAGAGCCAGTTGAGAATGTGACTTTTCAGGTAAATGGGGATGGTACAAATCCCCAGAATAATATCAAGAGTCTTTCAGCTTCCTCTTGTAAGCCCACTCTGCAGAAAGAACAGTCTAAGCGACCTGAGCCAATTGAACTTACTGGAGGAATTTGCGAAAGGAAAGATGGAAATAGGTTCCAGTCACCTAATTCACATAGTGGACCATCTCAGCAAAGCATAGTTGAAGAAAGTAGCATGTCCATTGATGTATTCAAGTGTAACCTCTGTGAATTCATAAAAAATATCATAAAGCCATTGTGGGAAGATGGGCTGTTATCCCGGGAAGTCCACAAAATTATAGTGAGGAAGGCTGTGGAAAAAGTGACCACCGTGTTGGGCTCAAAGGTCCCTCTGACAGAGATAGATGCCTGTAGATTTTTGTTAGAAGAATCTCAGAATCTAGAGAAACTCGTTCAGGGTTACTTAGATTTATACGTGGGAAGGGAAGTTCTTAAAAAGAAGCACGACCGATAA
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| Protein seq | MASHRDKARGCWRSGRDGRRKRREGCRQALPALEGGRIRAKAISVQDEIPHQFRGHDLLHSHGKTLNDRSCSHSFREEETKDLVSSSHDDAETEKNFAIWDQPLDRTGLLESKRHRRSSSPRYCMKSYPFGNKIDGYHGEGRACPRDSSKWGNHSLSPDHAPTSCLRTEGEVPSLNRVSEYAKGADGHMCTTERLGDFFSSNQGSCTQNRSYQEVQRLPTEVNFPNAHFSAIDKARHRSYMEKFQTCKKHQGTCSKDLMFNISDHSLVGRTCHRFEVGRAHTSKAFDEFHAFHHEQLHQSPRDNFRDQLGSSRNFRNVHKGKMSRRQCTKHDLKKKNSNVAFHSTYGRNSDRKRHGNHLDGHRAKRNMPSENQSKESCYPNMKDWQSYSHGDVRQSGDNQEGNTKKIKKGGQNGEKGNYHRNNNIPTVVCSGSKSNENSGLLSPKCRSKTIMSSNGPKQSEGSENIKLESEKKPSLVVCTKKTEDVKSDEVSNGKLQDAPVTYVENGVKESDNASPSELLRDCLIIWRRLKKDNCAEAENVKKTNTNRTVQTSKVSVSERLRNGRPSSGFDDENSSTSGSASVSSESDDESNSPSEDSKQCRGVMSSSEAQKCSKGRTERESEQPFKSLSGDNRMKSPQNTIAEKGLMFYQDVPPETNPSEVMQQKEQDDLSCCWNGCSDTSTKPVADSHPESSVHQKFSQQGAIEGHSNARSRHELVVGCDIENTLEADGAKSGEQSTVPELLDKKAAVLCSMDDDSVKVVNVSACSNQDSDTTPCGVTKLDKGTANKFLEKPVNLSTGSNFRVIQWGAVDCNIVRIKQENSQHADSEQDTHHKESGEPSQALKVASNQQIPHQFDSDRDNPCTTRQADWDSCSSIPDLNCLPNMNTDDELEPVENVTFQVNGDGTNPQNNIKSLSASSCKPTLQKEQSKRPEPIELTGGICERKDGNRFQSPNSHSGPSQQSIVEESSMSIDVFKCNLCEFIKNIIKPLWEDGLLSREVHKIIVRKAVEKVTTVLGSKVPLTEIDACRFLLEESQNLEKLVQGYLDLYVGREVLKKKHDR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0172175 | 0.0193165 | 5.438761 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0569000 | RBH | 0.0 | 0.0 | 1.057056 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g37140 | RBH | 0.0 | 0.0 | 0.192152 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0569000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0023790 | RBH | 0.0 | 0.0 | 1.241795 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0023620 | RBH | 0.0 | 0.0 | 0.741018 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0023660 | RBH | 0.0 | 0.0 | 1.581192 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0023690 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0023500 | RBH | 0.0 | 0.0 | 2.388949 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0023280 | RBH | 0.0 | 0.0 | 0.218872 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0353500 | RBH | 0.030635 | 0.0452585 | 3.01028 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0023550 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0023580 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0023680 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0023480 | RBH | 0.0 | 0.0 | 0.081984 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0023360 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G023390 | RBH | 0.053437 | 0.0 | 0.302354 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0023340 | RBH | 0.0 | 0.0 | 0.431116 |
| Os XI: R9311 | R9311 | AGIS | R9311C03g12455 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_03g0273800 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_03g0272600 | SBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_03g0255800 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_03g0280100 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0305025000.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0312077200.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_007892 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0310419800.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0311592200.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0305565200.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0305026200.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0307184000.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0305579200.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0305615200.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0304979600.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0304998800.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0311356600.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0305010200.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0305010400.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0304778600.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0305054400.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0305038800.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0304995000.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0306403200.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0305744600.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0314742800.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0307557000.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0304970200.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0304988000.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0305045200.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0305019200.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0307920800.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0305057800.01 | RBH | None | None | None |
