Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_01G0062500 | OGI:01012850 | 49/50 | Minghui 63 | MH63RS3 | HZAU | Chr01:3504189-3505663 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | |||||||||||
| DNA seq | GTGTAGAGGCTGAATTAGAACTCTGAATAATGAATTTGACCTCAATTCTACAGGAGAGGAGGATTCTGTATATCCCAAAAATCTAGCAATTTCATACATATTTGAACAAATATATAAGTACAGCAGAATTCAACCGAATTACAAAATCAACTTAATTTGAACATCATCACTTAGGATGGCTGGCTAGGTAGCTGCTGATTCAGGCTGGCTGGCTGCGAGCTGAGCTAGTAATCAACTAGCTAATCAGTAATCACACTCAAGATGATCATCAATTACTCATCGAGCTCTACTCGTCGAATAATCTGCACGGTACAGCTCGCAATCCCACGCATCAACGTCGAGCAATCCGGGGACATCGACGAGCAAGTCGAGGTCATCGAGCGCGAGGAGGTGGACCATGTCGCCGTCGCCGTCGACGTCGCCGCCGGAGAAGCAGTAGTCACGGGAGGAGTCCTCGCCGCCGCCGTTGCCGCCGCAGGCGCTCACCTCGCTGACATCCGATGAACCGGCGTTCGGCGGCGACTGTGTGGTGGCGGTGGCGCCGCCGCTGCCGCCTCCGTCGAGCAGTTGGCAGGAGAACATCGGGAGCCGCGCCGGGATAGGAGGAGGAGGAGGAGATGCCGCCTCCGGCGCCGCCGCCACGGTGGCCGCATTGGCCGTCGGTTCTTTCTCCATGACCGTGGCCGGCGCCGGCTCGCCTTTAGCTCCGGCGGCGGCGGACTGACGCTTCCTGATGCGGGAATTCCAGTAGTTCTTGATCTCGTTGTCCGTCCTGCCCGGCATCTTCGCCGCGATCACCGACCACCTGCAGCCCACACATATCATCCATGATCAAATCAACACTGATAACTAAATCGAAAGTTCAGCTAGAGAATCGGATTAACCATGAAACTGAACACGGATTTTGGTACTGAAACTGAAGAGAACTTTTACTTTTACGGTACACTATACTGCAAGTATATACTAGCAGTATATACAATCTAACGGTGTAAAAGTCCTCCAACTGAATTGCTACCTGTTGCCGAGGAGTTTCTGCAGGGAGATGATGGTCTCCGCCTCTCGATCGGAGATGGGCTCCTTCTTCAGGTCAGGCCTCAGGTAGTTCATCCACCTCAGCCTGCAGCTCTTGCCACTCCGCCTCAATCCTGCACAATGGAAGGAATGCAATGCCAACCTTGTCAGATCAAGAAACCAAATCACCTGTCTAGCAATCAGCTGCAGAGAAATCAATCAAATTACAAGCTAGACAGACTATCGAAGCATGATTAATTAAGTTAGGTGTCAAATGAATTCTTGCCTGCGAGCTGAGCGACTGAGCTCCAGGTGGAGACGCCGCGGTGGGTGATGTGGGTGTAGAGCCGCTCGTCCTCCTCCGGCGACCACAGCCCCTTCCTCTCCTTCTCCTCCGCCGCGCCGCCGCCGCCGGCGGCGGCGGCCGCCTCGCCGTTTCTACTACTCGTCGGCTTCCGCACCAT
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| CDS seq | MVRKPTSSRNGEAAAAAGGGGAAEEKERKGLWSPEEDERLYTHITHRGVSTWSSLIARQVIWFLDLTRLALHSFHCAGLRRSGKSCRLRWMNYLRPDLKKEPISDREAETIISLQKLLGNRWSVIAAKMPGRTDNEIKNYWNSRIRKRQSAAAGAKGEPAPATVMEKEPTANAATVAAAPEAASPPPPPIPARLPMFSCQLLDGGGSGGATATTQSPPNAGSSDVSEVSACGGNGGGEDSSRDYCFSGGDVDGDGDMVHLLALDDLDLLVDVPGLLDVDAWDCELYRADYSTSRAR |
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| Protein seq | MVRKPTSSRNGEAAAAAGGGGAAEEKERKGLWSPEEDERLYTHITHRGVSTWSSLIARQVIWFLDLTRLALHSFHCAGLRRSGKSCRLRWMNYLRPDLKKEPISDREAETIISLQKLLGNRWSVIAAKMPGRTDNEIKNYWNSRIRKRQSAAAGAKGEPAPATVMEKEPTANAATVAAAPEAASPPPPPIPARLPMFSCQLLDGGGSGGATATTQSPPNAGSSDVSEVSACGGNGGGEDSSRDYCFSGGDVDGDGDMVHLLALDDLDLLVDVPGLLDVDAWDCELYRADYSTSRAR |
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| Function | Myb-related protein Hv33 [UniProtKB/Swiss-Prot:P20027] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0062500 | OsMH63_01T0062500.1 | Chr01 | 3504189 | 3505663 | - | maker | ||
| CDS seq | ATGGTGCGGAAGCCGACGAGTAGTAGAAACGGCGAGGCGGCCGCCGCCGCCGGCGGCGGCGGCGCGGCGGAGGAGAAGGAGAGGAAGGGGCTGTGGTCGCCGGAGGAGGACGAGCGGCTCTACACCCACATCACCCACCGCGGCGTCTCCACCTGGAGCTCACTGATTGCTAGACAGGTGATTTGGTTTCTTGATCTGACAAGGTTGGCATTGCATTCCTTCCATTGTGCAGGATTGAGGCGGAGTGGCAAGAGCTGCAGGCTGAGGTGGATGAACTACCTGAGGCCTGACCTGAAGAAGGAGCCCATCTCCGATCGAGAGGCGGAGACCATCATCTCCCTGCAGAAACTCCTCGGCAACAGGTGGTCGGTGATCGCGGCGAAGATGCCGGGCAGGACGGACAACGAGATCAAGAACTACTGGAATTCCCGCATCAGGAAGCGTCAGTCCGCCGCCGCCGGAGCTAAAGGCGAGCCGGCGCCGGCCACGGTCATGGAGAAAGAACCGACGGCCAATGCGGCCACCGTGGCGGCGGCGCCGGAGGCGGCATCTCCTCCTCCTCCTCCTATCCCGGCGCGGCTCCCGATGTTCTCCTGCCAACTGCTCGACGGAGGCGGCAGCGGCGGCGCCACCGCCACCACACAGTCGCCGCCGAACGCCGGTTCATCGGATGTCAGCGAGGTGAGCGCCTGCGGCGGCAACGGCGGCGGCGAGGACTCCTCCCGTGACTACTGCTTCTCCGGCGGCGACGTCGACGGCGACGGCGACATGGTCCACCTCCTCGCGCTCGATGACCTCGACTTGCTCGTCGATGTCCCCGGATTGCTCGACGTTGATGCGTGGGATTGCGAGCTGTACCGTGCAGATTATTCGACGAGTAGAGCTCGATGA
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| Protein seq | MVRKPTSSRNGEAAAAAGGGGAAEEKERKGLWSPEEDERLYTHITHRGVSTWSSLIARQVIWFLDLTRLALHSFHCAGLRRSGKSCRLRWMNYLRPDLKKEPISDREAETIISLQKLLGNRWSVIAAKMPGRTDNEIKNYWNSRIRKRQSAAAGAKGEPAPATVMEKEPTANAATVAAAPEAASPPPPPIPARLPMFSCQLLDGGGSGGATATTQSPPNAGSSDVSEVSACGGNGGGEDSSRDYCFSGGDVDGDGDMVHLLALDDLDLLVDVPGLLDVDAWDCELYRADYSTSRAR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0.194029 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0285300 | SBH | 0.0 | 0.0 | 3.076899 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g07430 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0285300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0005020 | RBH | 0.0 | 3.300795 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0004720 | RBH | 0.0 | 0.693267 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0004960 | RBH | 0.0 | 0.000000 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0004620 | RBH | 0.0 | 0.074197 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0004840 | RBH | 0.0 | 0.000000 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0062600 | RBH | 0.010636 | 1.1026285 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0004770 | RBH | 0.0 | 0.407025 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0063600 | RBH | 0.023609 | 0 | 0.021569 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0004600 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0004780 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0004840 | RBH | 0.0 | 3.543568 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0004800 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0004770 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G004840 | RBH | 0.0 | 0.000000 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0004730 | RBH | 0.0 | 0.0 | 0.0 |
| Os XI: R9311 | R9311 | AGIS | R9311C01g00586 | SBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_01g0055700 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_01g0055400 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_01g0055600 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_01g0052400 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0100177400.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0100460000.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_000499 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0100443400.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0100377400.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0100168000.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0100169400.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0100126600.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0100171000.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0100170600.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0100169200.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0100165600.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0100385600.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0100171600.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0100167400.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0100135600.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0100172000.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0100164000.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0100173000.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0100227600.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0100282800.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0100645800.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0100170400.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0100162600.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0100167600.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0100167200.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0100169000.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0100253600.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0100166600.01 | RBH | None | None | None |
