Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsHZ_11g0134900 | OGI:11050844 | 15/50 | Os XI-adm: HZ | HZ | PKU | Chr11:13201612-13202357 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | 132278_HZ_DEL1123190,132278_HZ_INV1122880,S548_HZ_INV1114790,02428_HZ_DEL1119380,02428_HZ_INV1119060,R498_HZ_INV1113000,FS32_HZ_DEL1113130,G8_HZ_INV1106000,125827_HZ_INV1117210_26,FH838_HZ_INV1112560,117534_HZ_INV1116560,WSSM_HZ_INV1106430,ZH11_HZ_DEL1122090,ZH11_HZ_INV1121860,R527_HZ_INV1121830,DHX2_HZ_DEL1120760,DHX2_HZ_INV1120470,CN1_HZ_INV1115770,Lemont_HZ_DEL1125070,Lemont_HZ_INV1124960,127742_HZ_INV1119360,MH63RS3_HZ_INV1120030,G46_HZ_DEL1110820,G46_HZ_DEL1110830,DG_HZ_INV1109920_1,128077_HZ_DEL1121950,D62_HZ_DEL1112600,D62_HZ_INV1112190,II32_HZ_DEL1109490,II32_HZ_DEL1109620,IR64_HZ_INV1108700_1,R9311_HZ_INV1119670,Tumba_HZ_INV1114700,
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| DNA seq | CTAGGGACACCTCGTCAACCCTACCACCGTCCGCGCCGTCGCGGACGCCGCGGCCGCCACGGCTGAAGCAGCCACTCGTGATGCCTTCTCCAACTTCCTCCGGCCGCTCCTTCCAGCACCGGCCTCTGGCAAGCTCGTCGACACCTCGTCCACCCTCGTCGACCCCATGACGGCGCTTCCAGCTCCTGCGACGGACGTCCCACCGTCGTCTCTCAACCTCTCTGCAGCAGACCTGGCAGCCATGGTTGCCGCAACTCGGCACCCTCTCGACGGCACCCGGACGACTGCCTCCACCGCCGTCGCAGGTCTTTCCTGTGCCGCCACCGGTCATCAATGCCGACACCCTGGCCGCTCTCCACTAGCAGGCTATTTCCATCCTCAACATCAAGGCGTTGATCCCCGTCACACTTGACCTCGCCACCAGGAACAAAACTCGCTGGCACGGCATGTTTCTCGTGGTCCACGGCAAGTATGCTCTCACGGACCACATGCTCTCTGACGATCCTCCCGCTCATCCGGACTAGGCGAAGATGGACTGTGTCGTGCTCACTTGGCTCTCTGGGACCATCTCCGCCGACCTCTTCCAGGAAGTCCTGTCCCCAACGTCGTACGCGTGCGTCGTCTAGCGCAACCTCGAGCACCAGTTCCTTGGCAACTCCGAGCTTCGCGCCATCCACCTCGCCGCCGAGTTCTACACCTTCCTTCAAGGCGACATATCCGGCACCGACTACTGTCGTCGTCTTCAT
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| CDS seq | MKTTTVVGAGYVALKEGVELGGEVDGAKLGVAKELVLEVALDDARVRRWGQDFLEEVGGDGPREPSEHDTVHLRLVRMSGRIVREHVERPATAVEAVVRVPSRGCRVAATMAARSAAERLRDDGGTSVAGAGSAVMGSTRVDEVSTSLPEAGAGRSGRRKLEKASRVAASAVAAAASATARTVVGLTRCP |
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| Protein seq | MKTTTVVGAGYVALKEGVELGGEVDGAKLGVAKELVLEVALDDARVRRWGQDFLEEVGGDGPREPSEHDTVHLRLVRMSGRIVREHVERPATAVEAVVRVPSRGCRVAATMAARSAAERLRDDGGTSVAGAGSAVMGSTRVDEVSTSLPEAGAGRSGRRKLEKASRVAASAVAAAASATARTVVGLTRCP |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsHZ_11g0134900 | OsHZ_11g0134900.10 | Chr11 | 13201612 | 13202357 | - | . | ||
| CDS seq | ATGAAGACGACGACAGTAGTCGGTGCCGGATATGTCGCCTTGAAGGAAGGTGTAGAACTCGGCGGCGAGGTGGATGGCGCGAAGCTCGGAGTTGCCAAGGAACTGGTGCTCGAGGTTGCGCTAGACGACGCACGCGTACGACGTTGGGGACAGGACTTCCTGGAAGAGGTCGGCGGAGATGGTCCCAGAGAGCCAAGTGAGCACGACACAGTCCATCTTCGCCTAGTCCGGATGAGCGGGAGGATCGTCAGAGAGCATGTGGAAAGACCTGCGACGGCGGTGGAGGCAGTCGTCCGGGTGCCGTCGAGAGGGTGCCGAGTTGCGGCAACCATGGCTGCCAGGTCTGCTGCAGAGAGGTTGAGAGACGACGGTGGGACGTCCGTCGCAGGAGCTGGAAGCGCCGTCATGGGGTCGACGAGGGTGGACGAGGTGTCGACGAGCTTGCCAGAGGCCGGTGCTGGAAGGAGCGGCCGGAGGAAGTTGGAGAAGGCATCACGAGTGGCTGCTTCAGCCGTGGCGGCCGCGGCGTCCGCGACGGCGCGGACGGTGGTAGGGTTGACGAGGTGTCCCTAG
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| Protein seq | MKTTTVVGAGYVALKEGVELGGEVDGAKLGVAKELVLEVALDDARVRRWGQDFLEEVGGDGPREPSEHDTVHLRLVRMSGRIVREHVERPATAVEAVVRVPSRGCRVAATMAARSAAERLRDDGGTSVAGAGSAVMGSTRVDEVSTSLPEAGAGRSGRRKLEKASRVAASAVAAAASATARTVVGLTRCP |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Os XI: R9311 | R9311 | AGIS | NA | NA | NA | NA | NA |
| Os XI-adm: HZ | HZ | PKU | NA | NA | NA | NA | NA |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_11g0132400 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_11g0130000 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_11g0133700 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G1121559700.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G1135130600.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | NA | NA | NA | NA | NA |
| Os XI-1A: CN1 | CN1 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1A: D62 | D62 | SICAU | OsD62G1133475100.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | NA | NA | NA | NA | NA |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G1130024100.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G1130475900.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G1122691700.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | NA | NA | NA | NA | NA |
| Os XI-adm: G630 | G630 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: G8 | G8 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1A: II32 | II32 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: J4155 | J4155 | SICAU | NA | NA | NA | NA | NA |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0036053600.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | NA | NA | NA | NA | NA |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG1121198700.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0508540500.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: R498 | R498 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: R527 | R527 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: S548 | S548 | SICAU | NA | NA | NA | NA | NA |
| Os XI-2: TM | TM | SICAU | NA | NA | NA | NA | NA |
| Os XI-3: Tumba | Tumba | SICAU | NA | NA | NA | NA | NA |
| Os XI-adm: WSSM | WSSM | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: Y3551 | Y3551 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: Y58S | Y58S | SICAU | NA | NA | NA | NA | NA |
| Os XI-adm: YX1 | YX1 | SICAU | NA | NA | NA | NA | NA |
| Os GJ-temp: ZH11 | ZH11 | SICAU | NA | NA | NA | NA | NA |
