Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_11g0011610 | OGI:01044520 | 4/50 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr11:12033375-12033826 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | ZS97RS3_132278_INV1129990,127564_132278_INV1122670,KY131_132278_INS1109110,XL628S_132278_INV1129070,117425_132278_INV1112000,125619_132278_INV1123520_2,TM_132278_DEL1128420,TM_132278_DEL1128550,LK638S_132278_INV1127940,II32_132278_INS1127550,127652_132278_INV1126860,Azucena_132278_INV1107170,J4155S_132278_INV1130520,HZ_132278_INV1128650,
More
|
||||||||||
| DNA seq | ATGGAGGTAGGAGGAACAGCCGGAGTCAATGTCGACGGCAGCCTCGTCGCCGGGTCAGGCAGCCGTTTTCATGGCCGCTGCACCAGTCGTCAAGGAGGAAGGAGCAGCGGGGAGGTGCTTCCTCACGGCATCGATGAGGGAGGACGCGAGGCACAGGTTGGTCGAAGTCGGCCCCGGACGCCGACGGGCGGTAGCAGCTACGACGACCACCGATCTGGTCGGTTGTTCTCCTCTCCCAACGACCGGTGGTAGTGAAGGCATGGTGGATCTAGAGGCTGCTGCTGTAGCTCTGCAATGGCAGGAGGTCAGCAGCCAGGAGGGAGGAGCAGGAGGCGTTTTTGCCACGTAGTGCTGGCACAGCACGCAGTGCGGTGGCTGCTGACAGCGAGGGCGCGCGTCGAGGCGGCCATGCGGTGAGGCGTGCGGTGGCTGCTCTCCTGCTTGCTGCGTGA
More
|
||||||||||
| CDS seq | MEVGGTAGVNVDGSLVAGSGSRFHGRCTSRQGGRSSGEVLPHGIDEGGREAQLCNGRRSAARREEQEAFLPRSAGTARSAVAADSEGARRGGHAVRRAVAALLLAA |
||||||||||
| Protein seq | MEVGGTAGVNVDGSLVAGSGSRFHGRCTSRQGGRSSGEVLPHGIDEGGREAQLCNGRRSAARREEQEAFLPRSAGTARSAVAADSEGARRGGHAVRRAVAALLLAA |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_11g0011610 | OsCMeo_11g0011610.01 | Chr11 | 12033375 | 12033826 | + | NAM | ||
| CDS seq | - |
|||||||
| Protein seq | MEVGGTAGVNVDGSLVAGSGSRFHGRCTSRQGGRSSGEVLPHGIDEGGREAQLCNGRRSAARREEQEAFLPRSAGTARSAVAADSEGARRGGHAVRRAVAALLLAA |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0011640 | RBH | 0.0 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0011660 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0011330 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0013040 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0013130 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0012760 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G012830 | SBH | 0.0 | 0.0 | 0.616047 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0012930 | SBH | 0.0 | 0.0 | 0.0 |
| Os XI: R9311 | R9311 | AGIS | NA | NA | NA | NA | NA |
| Os XI-adm: HZ | HZ | PKU | NA | NA | NA | NA | NA |
| Os XI-adm: J4155S | J4155S | PKU | NA | NA | NA | NA | NA |
| Os XI-adm: LK638S | LK638S | PKU | NA | NA | NA | NA | NA |
| Os XI-adm: XL628S | XL628S | PKU | NA | NA | NA | NA | NA |
| Os GJ-temp: 02428 | 02428 | SICAU | NA | NA | NA | NA | NA |
| Os cB: Basmati1 | Basmati1 | SICAU | NA | NA | NA | NA | NA |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_029144 | SBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1A: D62 | D62 | SICAU | OsD62G1133900200.01 | SBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | NA | NA | NA | NA | NA |
| Os GJ-temp: DHX2 | DHX2 | SICAU | NA | NA | NA | NA | NA |
| Os XI-adm: FH838 | FH838 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1A: FS32 | FS32 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1A: G46 | G46 | SICAU | NA | NA | NA | NA | NA |
| Os XI-adm: G630 | G630 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: G8 | G8 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1A: II32 | II32 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: J4155 | J4155 | SICAU | NA | NA | NA | NA | NA |
| Os GJ-temp: Kosh | Kosh | SICAU | NA | NA | NA | NA | NA |
| Os GJ-temp: KY131 | KY131 | SICAU | NA | NA | NA | NA | NA |
| Os GJ-trp: Lemont | Lemont | SICAU | NA | NA | NA | NA | NA |
| Os GJ-adm: LJ | LJ | SICAU | NA | NA | NA | NA | NA |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: R498 | R498 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: R527 | R527 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: S548 | S548 | SICAU | NA | NA | NA | NA | NA |
| Os XI-2: TM | TM | SICAU | NA | NA | NA | NA | NA |
| Os XI-3: Tumba | Tumba | SICAU | NA | NA | NA | NA | NA |
| Os XI-adm: WSSM | WSSM | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: Y3551 | Y3551 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: Y58S | Y58S | SICAU | NA | NA | NA | NA | NA |
| Os XI-adm: YX1 | YX1 | SICAU | NA | NA | NA | NA | NA |
| Os GJ-temp: ZH11 | ZH11 | SICAU | NA | NA | NA | NA | NA |
